RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.44■■□□□ 1.18
CCDC171-206ENST00000474193 CDK5RAP2Q96SN8 1893 aa22.43■■□□□ 1.18
CCDC171-206ENST00000474193 USP17L10C9JJH3 530 aa22.43■■□□□ 1.18
CCDC171-206ENST00000474193 ERC2O15083 957 aa22.43■■□□□ 1.18
CCDC171-206ENST00000474193 PSMC4P43686 418 aa22.43■■□□□ 1.18
CCDC171-206ENST00000474193 HMGCS2P54868 508 aa22.43■■□□□ 1.18
CCDC171-206ENST00000474193 UBE3CQ15386 1083 aa22.43■■□□□ 1.18
CCDC171-206ENST00000474193 CERKLQ49MI3 558 aaPredicted RBP22.43■■□□□ 1.18
CCDC171-206ENST00000474193 CCDC136Q96JN2 1154 aa22.43■■□□□ 1.18
CCDC171-206ENST00000474193 TCRBV5S4A2TA0A5A2 114 aa22.42■■□□□ 1.18
CCDC171-206ENST00000474193 GDF11O95390 407 aa22.42■■□□□ 1.18
CCDC171-206ENST00000474193 FCGRTP55899 365 aa22.42■■□□□ 1.18
CCDC171-206ENST00000474193 BACE1P56817 501 aa22.42■■□□□ 1.18
CCDC171-206ENST00000474193 RRP1BQ14684 758 aaKnown RBP22.42■■□□□ 1.18
CCDC171-206ENST00000474193 SLC9C1Q4G0N8 1177 aa22.42■■□□□ 1.18
CCDC171-206ENST00000474193 ATP8A2Q9NTI2 1148 aa22.42■■□□□ 1.18
CCDC171-206ENST00000474193 ZBTB21Q9ULJ3 1066 aa22.42■■□□□ 1.18
CCDC171-206ENST00000474193 SH3D19Q5HYK7 790 aa22.41■■□□□ 1.18
CCDC171-206ENST00000474193 B4GALNT3Q6L9W6 998 aa22.41■■□□□ 1.18
CCDC171-206ENST00000474193 TATDN1Q6P1N9 297 aa22.41■■□□□ 1.18
CCDC171-206ENST00000474193 SMC5Q8IY18 1101 aa22.41■■□□□ 1.18
CCDC171-206ENST00000474193 TMEM106CQ9BVX2 250 aa22.41■■□□□ 1.18
CCDC171-206ENST00000474193 DNAJC18Q9H819 358 aa22.41■■□□□ 1.18
CCDC171-206ENST00000474193 ARMT1Q9H993 441 aa22.41■■□□□ 1.18
CCDC171-206ENST00000474193 TAOK2Q9UL54 1235 aa22.41■■□□□ 1.18
CCDC171-206ENST00000474193 ECM2O94769 699 aaPredicted RBP22.4■■□□□ 1.18
CCDC171-206ENST00000474193 MBD4O95243 580 aa22.4■■□□□ 1.18
CCDC171-206ENST00000474193 GCLCP48506 637 aaPredicted RBP22.4■■□□□ 1.18
CCDC171-206ENST00000474193 LCORLQ8N3X6 602 aa22.4■■□□□ 1.18
CCDC171-206ENST00000474193 ATAD5Q96QE3 1844 aa22.4■■□□□ 1.18
CCDC171-206ENST00000474193 TTC41PQ6P2S7 1318 aa22.39■■□□□ 1.18
CCDC171-206ENST00000474193 GH2P01242 217 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 BCRP11274 1271 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 IRX3P78415 501 aaPredicted RBP22.39■■□□□ 1.17
CCDC171-206ENST00000474193 MTMR2Q13614 643 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 ABCB5Q2M3G0 1257 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 TREML2Q5T2D2 321 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 RAET1EQ8TD07 263 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 SDR42E1Q8WUS8 393 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 FEZ1Q99689 392 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 ARHGAP39Q9C0H5 1083 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 DCP1AQ9NPI6 582 aaPredicted RBP22.39■■□□□ 1.17
CCDC171-206ENST00000474193 PPP4R2Q9NY27 417 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 PTCH2Q9Y6C5 1203 aa22.39■■□□□ 1.17
CCDC171-206ENST00000474193 PHIPQ8WWQ0 1821 aa22.38■■□□□ 1.17
CCDC171-206ENST00000474193 ADGRA2Q96PE1 1338 aa22.38■■□□□ 1.17
CCDC171-206ENST00000474193 ZFYP08048 801 aaPredicted RBP22.38■■□□□ 1.17
CCDC171-206ENST00000474193 PLCD1P51178 756 aa22.38■■□□□ 1.17
CCDC171-206ENST00000474193 RAB3GAP1Q15042 981 aa22.38■■□□□ 1.17
CCDC171-206ENST00000474193 USP17L2Q6R6M4 530 aa22.38■■□□□ 1.17
CCDC171-206ENST00000474193 KBTBD3Q8NAB2 608 aa22.38■■□□□ 1.17
CCDC171-206ENST00000474193 SRRDQ9UH36 339 aa22.38■■□□□ 1.17
CCDC171-206ENST00000474193 SWAP70Q9UH65 585 aa22.38■■□□□ 1.17
CCDC171-206ENST00000474193 USP14P54578 494 aa22.37■■□□□ 1.17
CCDC171-206ENST00000474193 ARMC5Q96C12 935 aa22.37■■□□□ 1.17
CCDC171-206ENST00000474193 TRIM47Q96LD4 638 aa22.37■■□□□ 1.17
CCDC171-206ENST00000474193 SLC4A4Q9Y6R1 1079 aa22.37■■□□□ 1.17
CCDC171-206ENST00000474193 PTPRFP10586 1907 aa22.37■■□□□ 1.17
CCDC171-206ENST00000474193 MPHOSPH10O00566 681 aaKnown RBP22.36■■□□□ 1.17
CCDC171-206ENST00000474193 GLRX3O76003 335 aaKnown RBP22.36■■□□□ 1.17
CCDC171-206ENST00000474193 CENPQQ7L2Z9 268 aaPredicted RBP22.36■■□□□ 1.17
CCDC171-206ENST00000474193 ANKRD13CQ8N6S4 541 aa22.36■■□□□ 1.17
CCDC171-206ENST00000474193 SIPA1L1O43166 1804 aa22.36■■□□□ 1.17
CCDC171-206ENST00000474193 MYPNQ86TC9 1320 aa22.35■■□□□ 1.17
CCDC171-206ENST00000474193 TNPO2O14787 897 aaKnown RBP22.35■■□□□ 1.17
CCDC171-206ENST00000474193 CAP1Q01518 475 aa22.35■■□□□ 1.17
CCDC171-206ENST00000474193 NUCB1Q02818 461 aa22.35■■□□□ 1.17
CCDC171-206ENST00000474193 FAM110CQ1W6H9 321 aa22.35■■□□□ 1.17
CCDC171-206ENST00000474193 CHD1LQ86WJ1 897 aa22.35■■□□□ 1.17
CCDC171-206ENST00000474193 COA7Q96BR5 231 aa22.35■■□□□ 1.17
CCDC171-206ENST00000474193 ASCC2Q9H1I8 757 aaPredicted RBP22.35■■□□□ 1.17
CCDC171-206ENST00000474193 RNF113AO15541 343 aaKnown RBP22.34■■□□□ 1.17
CCDC171-206ENST00000474193 HOXA7P31268 230 aaPredicted RBP22.34■■□□□ 1.17
CCDC171-206ENST00000474193 JAG1P78504 1218 aa22.34■■□□□ 1.17
CCDC171-206ENST00000474193 BIN2Q9UBW5 565 aaPredicted RBP22.34■■□□□ 1.17
CCDC171-206ENST00000474193 PRKAB2O43741 272 aa22.33■■□□□ 1.17
CCDC171-206ENST00000474193 MX1P20591 662 aa22.33■■□□□ 1.17
CCDC171-206ENST00000474193 SHMT1P34896 483 aa22.33■■□□□ 1.17
CCDC171-206ENST00000474193 SLFNL1Q499Z3 407 aa22.33■■□□□ 1.17
CCDC171-206ENST00000474193 TSHZ3Q63HK5 1081 aa22.33■■□□□ 1.17
CCDC171-206ENST00000474193 CCAR1Q8IX12 1150 aaKnown RBP22.33■■□□□ 1.17
CCDC171-206ENST00000474193 GTF3C2Q8WUA4 911 aaPredicted RBP22.33■■□□□ 1.17
CCDC171-206ENST00000474193 APPBP2Q92624 585 aa22.33■■□□□ 1.17
CCDC171-206ENST00000474193 LNPKQ9C0E8 428 aa22.33■■□□□ 1.17
CCDC171-206ENST00000474193 PUS7LQ9H0K6 701 aaKnown RBP22.33■■□□□ 1.17
CCDC171-206ENST00000474193 MYH7P12883 1935 aa22.33■■□□□ 1.16
CCDC171-206ENST00000474193 USP17L12C9JPN9 530 aa22.32■■□□□ 1.16
CCDC171-206ENST00000474193 USP17L21D6R901 530 aa22.32■■□□□ 1.16
CCDC171-206ENST00000474193 GNAT2P19087 354 aa22.32■■□□□ 1.16
CCDC171-206ENST00000474193 GABPAQ06546 454 aa22.32■■□□□ 1.16
CCDC171-206ENST00000474193 ZNF333Q96JL9 665 aa22.32■■□□□ 1.16
CCDC171-206ENST00000474193 CCDC17Q96LX7 622 aa22.32■■□□□ 1.16
CCDC171-206ENST00000474193 NAV1Q8NEY1 1877 aa22.32■■□□□ 1.16
CCDC171-206ENST00000474193 GRK4P32298 578 aa22.31■■□□□ 1.16
CCDC171-206ENST00000474193 UBXN2AP68543 259 aa22.31■■□□□ 1.16
CCDC171-206ENST00000474193 ZYXQ15942 572 aaKnown RBP22.31■■□□□ 1.16
CCDC171-206ENST00000474193 C12orf60Q5U649 245 aa22.31■■□□□ 1.16
CCDC171-206ENST00000474193 TMEM179Q6ZVK1 233 aa22.31■■□□□ 1.16
CCDC171-206ENST00000474193 FSD1Q9BTV5 496 aa22.31■■□□□ 1.16
CCDC171-206ENST00000474193 USP17L15C9J2P7 530 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms