RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 HOXA7P31268 230 aaPredicted RBP24.86■■□□□ 1.57
APP-215ENST00000474136 CCL14Q16627 93 aa24.86■■□□□ 1.57
APP-215ENST00000474136 Q3C1V9 767 aa24.86■■□□□ 1.57
APP-215ENST00000474136 SOCS4Q8WXH5 440 aa24.86■■□□□ 1.57
APP-215ENST00000474136 TMOD4Q9NZQ9 345 aa24.86■■□□□ 1.57
APP-215ENST00000474136 RBPJLQ9UBG7 517 aa24.86■■□□□ 1.57
APP-215ENST00000474136 ATAD5Q96QE3 1844 aa24.85■■□□□ 1.57
APP-215ENST00000474136 ZKSCAN1P17029 563 aaPredicted RBP24.85■■□□□ 1.57
APP-215ENST00000474136 LHX8Q68G74 356 aa24.85■■□□□ 1.57
APP-215ENST00000474136 USP6NLQ92738 828 aa24.85■■□□□ 1.57
APP-215ENST00000474136 PORCNQ9H237 461 aa24.85■■□□□ 1.57
APP-215ENST00000474136 COL25A1Q9BXS0 654 aaPredicted RBP24.84■■□□□ 1.57
APP-215ENST00000474136 DNAJC18Q9H819 358 aa24.84■■□□□ 1.57
APP-215ENST00000474136 PI4KBQ9UBF8 816 aa24.84■■□□□ 1.57
APP-215ENST00000474136 RCAN3Q9UKA8 241 aa24.84■■□□□ 1.57
APP-215ENST00000474136 HDAC5Q9UQL6 1122 aa24.84■■□□□ 1.57
APP-215ENST00000474136 SRGAP3O43295 1099 aa24.83■■□□□ 1.56
APP-215ENST00000474136 PDE3AQ14432 1141 aa24.83■■□□□ 1.56
APP-215ENST00000474136 POTEEQ6S8J3 1075 aa24.83■■□□□ 1.56
APP-215ENST00000474136 GDF11O95390 407 aa24.82■■□□□ 1.56
APP-215ENST00000474136 ASNSP08243 561 aa24.82■■□□□ 1.56
APP-215ENST00000474136 MAPK4P31152 587 aa24.82■■□□□ 1.56
APP-215ENST00000474136 ERVK-9P63128 1117 aa24.82■■□□□ 1.56
APP-215ENST00000474136 ERVK-24P63145 666 aa24.82■■□□□ 1.56
APP-215ENST00000474136 MORN1Q5T089 497 aa24.82■■□□□ 1.56
APP-215ENST00000474136 GORABQ5T7V8 394 aa24.82■■□□□ 1.56
APP-215ENST00000474136 GPR142Q7Z601 462 aa24.82■■□□□ 1.56
APP-215ENST00000474136 PAGR1Q9BTK6 254 aa24.82■■□□□ 1.56
APP-215ENST00000474136 ARID4AP29374 1257 aaPredicted RBP24.81■■□□□ 1.56
APP-215ENST00000474136 MCAMP43121 646 aa24.81■■□□□ 1.56
APP-215ENST00000474136 MAPKAPK5Q8IW41 473 aa24.81■■□□□ 1.56
APP-215ENST00000474136 TRMT44Q8IYL2 757 aaKnown RBP24.81■■□□□ 1.56
APP-215ENST00000474136 API5Q9BZZ5 524 aaKnown RBP24.81■■□□□ 1.56
APP-215ENST00000474136 AATFQ9NY61 560 aaKnown RBP eCLIP24.81■■□□□ 1.56
APP-215ENST00000474136 LRP2BPQ9P2M1 347 aa24.81■■□□□ 1.56
APP-215ENST00000474136 C19orf81C9J6K1 198 aa24.8■■□□□ 1.56
APP-215ENST00000474136 USP17L10C9JJH3 530 aa24.8■■□□□ 1.56
APP-215ENST00000474136 RGS2P41220 211 aa24.8■■□□□ 1.56
APP-215ENST00000474136 GUCD1Q96NT3 240 aa24.8■■□□□ 1.56
APP-215ENST00000474136 SIPA1L1O43166 1804 aa24.79■■□□□ 1.56
APP-215ENST00000474136 PLEKHH3Q7Z736 793 aa24.79■■□□□ 1.56
APP-215ENST00000474136 CCAR1Q8IX12 1150 aaKnown RBP24.79■■□□□ 1.56
APP-215ENST00000474136 TGFBRAP1Q8WUH2 860 aa24.79■■□□□ 1.56
APP-215ENST00000474136 FAM161BQ96MY7 647 aa24.79■■□□□ 1.56
APP-215ENST00000474136 APBA2Q99767 749 aa24.79■■□□□ 1.56
APP-215ENST00000474136 DHX36Q9H2U1 1008 aaKnown RBP24.79■■□□□ 1.56
APP-215ENST00000474136 EMILIN3Q9NT22 766 aa24.79■■□□□ 1.56
APP-215ENST00000474136 POTEB2H3BUK9 544 aa24.78■■□□□ 1.56
APP-215ENST00000474136 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.78■■□□□ 1.56
APP-215ENST00000474136 NOL10Q9BSC4 688 aaKnown RBP24.78■■□□□ 1.56
APP-215ENST00000474136 PALD1Q9ULE6 856 aa24.78■■□□□ 1.56
APP-215ENST00000474136 ZBTB21Q9ULJ3 1066 aa24.78■■□□□ 1.56
APP-215ENST00000474136 NDUFB9Q9Y6M9 179 aa24.78■■□□□ 1.56
APP-215ENST00000474136 LAMA2P24043 3122 aaKnown RBP24.78■■□□□ 1.56
APP-215ENST00000474136 MTX1Q13505 466 aa24.77■■□□□ 1.56
APP-215ENST00000474136 ADGRA1Q86SQ6 560 aa24.77■■□□□ 1.56
APP-215ENST00000474136 METTL16Q86W50 562 aaKnown RBP24.77■■□□□ 1.56
APP-215ENST00000474136 CRACR2BQ8N4Y2 399 aaPredicted RBP24.77■■□□□ 1.56
APP-215ENST00000474136 SNRKQ9NRH2 765 aa24.77■■□□□ 1.56
APP-215ENST00000474136 FLT1P17948 1338 aa24.76■■□□□ 1.55
APP-215ENST00000474136 NAA16Q6N069 864 aaPredicted RBP24.76■■□□□ 1.55
APP-215ENST00000474136 FOXP4Q8IVH2 680 aaPredicted RBP24.76■■□□□ 1.55
APP-215ENST00000474136 SENP6Q9GZR1 1112 aaPredicted RBP24.76■■□□□ 1.55
APP-215ENST00000474136 FLRT1Q9NZU1 646 aa24.76■■□□□ 1.55
APP-215ENST00000474136 SAP30BPQ9UHR5 308 aaKnown RBP24.76■■□□□ 1.55
APP-215ENST00000474136 BAG3O95817 575 aa24.75■■□□□ 1.55
APP-215ENST00000474136 MAP2K5Q13163 448 aa24.75■■□□□ 1.55
APP-215ENST00000474136 TRIM34Q9BYJ4 488 aa24.75■■□□□ 1.55
APP-215ENST00000474136 DNAH12Q6ZR08 3092 aa24.75■■□□□ 1.55
APP-215ENST00000474136 CNMDO75829 334 aa24.74■■□□□ 1.55
APP-215ENST00000474136 FAM109BQ6ICB4 259 aaPredicted RBP24.74■■□□□ 1.55
APP-215ENST00000474136 GTF3C2Q8WUA4 911 aaPredicted RBP24.74■■□□□ 1.55
APP-215ENST00000474136 CWC22Q9HCG8 908 aaKnown RBP24.74■■□□□ 1.55
APP-215ENST00000474136 GNAI3P08754 354 aa24.73■■□□□ 1.55
APP-215ENST00000474136 UQCRFS1P1P0C7P4 283 aa24.73■■□□□ 1.55
APP-215ENST00000474136 RARSP54136 660 aaKnown RBP24.73■■□□□ 1.55
APP-215ENST00000474136 ATN1P54259 1190 aaPredicted RBP24.73■■□□□ 1.55
APP-215ENST00000474136 PPP4CP60510 307 aa24.73■■□□□ 1.55
APP-215ENST00000474136 ZYXQ15942 572 aaKnown RBP24.73■■□□□ 1.55
APP-215ENST00000474136 USP17L2Q6R6M4 530 aa24.73■■□□□ 1.55
APP-215ENST00000474136 EDC3Q96F86 508 aaKnown RBP24.73■■□□□ 1.55
APP-215ENST00000474136 LBHD1Q9BQE6 289 aaPredicted RBP24.73■■□□□ 1.55
APP-215ENST00000474136 PLCG2P16885 1265 aa24.72■■□□□ 1.55
APP-215ENST00000474136 GINM1Q9NU53 330 aa24.72■■□□□ 1.55
APP-215ENST00000474136 PNMA6EA0A0J9YXQ4 647 aa24.71■■□□□ 1.55
APP-215ENST00000474136 GH2P01242 217 aa24.71■■□□□ 1.55
APP-215ENST00000474136 WDR78Q5VTH9 848 aa24.71■■□□□ 1.55
APP-215ENST00000474136 MFSD14CQ5VZR4 134 aa24.71■■□□□ 1.55
APP-215ENST00000474136 RABGAP1Q9Y3P9 1069 aa24.71■■□□□ 1.55
APP-215ENST00000474136 VCANP13611 3396 aa24.7■■□□□ 1.54
APP-215ENST00000474136 DYNLL1P63167 89 aaKnown RBP24.7■■□□□ 1.54
APP-215ENST00000474136 G3BP1Q13283 466 aaKnown RBP eCLIP24.7■■□□□ 1.54
APP-215ENST00000474136 DDX20Q9UHI6 824 aaKnown RBP24.7■■□□□ 1.54
APP-215ENST00000474136 CYP2E1P05181 493 aaPredicted RBP24.69■■□□□ 1.54
APP-215ENST00000474136 CNGA1P29973 690 aa24.69■■□□□ 1.54
APP-215ENST00000474136 SUPT16HQ9Y5B9 1047 aaKnown RBP24.69■■□□□ 1.54
APP-215ENST00000474136 USP17L15C9J2P7 530 aa24.68■■□□□ 1.54
APP-215ENST00000474136 USP17L13C9JLJ4 530 aa24.68■■□□□ 1.54
APP-215ENST00000474136 USP17L11C9JVI0 530 aa24.68■■□□□ 1.54
APP-215ENST00000474136 USP17L18D6R9N7 530 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms