RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SYMPKQ92797 1274 aaKnown RBP6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 SIL1Q9H173 461 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 PRDM6Q9NQX0 595 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 GNL3LQ9NVN8 582 aaKnown RBP6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 PNMA3Q9UL41 463 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 DENND2AQ9ULE3 1009 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 LRRFIP2Q9Y608 721 aaKnown RBP6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 CHD7Q9P2D1 2997 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 MYH2Q9UKX2 1941 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 FAM196BA6NMK8 535 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 CIAO1O76071 339 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 PRKCSHP14314 528 aaPredicted RBP6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 ADORA1P30542 326 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 RHBDL3P58872 404 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 TRIM32Q13049 653 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 RASGRF1Q13972 1273 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 DZIP1Q86YF9 867 aaKnown RBP6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 TDHQ8IZJ6 230 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 ZGPATQ8N5A5 531 aaKnown RBP6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 PROCA1Q8NCQ7 364 aaPredicted RBP6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 COL25A1Q9BXS0 654 aaPredicted RBP6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 NBPF3Q9H094 633 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 MTMR10Q9NXD2 777 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 GJD2Q9UKL4 321 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 MROH7-TTC4A0A0A0MT08 1334 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 PFASO15067 1338 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 PDS5AQ29RF7 1337 aaKnown RBP6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 RPTORQ8N122 1335 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 ZNF521Q96K83 1311 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 REV3LO60673 3130 aa6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 DDX60LQ5H9U9 1706 aaKnown RBP6.39□□□□□ -1.39
SNRNP40-204ENST00000474025 TBC1D12O60347 775 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 SYN1P17600 705 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 BTDP43251 543 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 GCLCP48506 637 aaPredicted RBP6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 HMGCS2P54868 508 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 PICALMQ13492 652 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 MAP3K21Q5TCX8 1036 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 CCDC102BQ68D86 513 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 ZNF280CQ8ND82 737 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 ZNF384Q8TF68 577 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 SSH1Q8WYL5 1049 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 TRIB2Q92519 343 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 KRTAP3-3Q9BYR6 98 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 ASCC2Q9H1I8 757 aaPredicted RBP6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 HMX1Q9NP08 348 aaPredicted RBP6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 CEP126Q9P2H0 1117 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 OGDHLQ9ULD0 1010 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 COL2A1P02458 1487 aaPredicted RBP6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 PLXNB2O15031 1838 aa6.38□□□□□ -1.39
SNRNP40-204ENST00000474025 GPR75-ASB3A0A0A6YYF3 556 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 COL6A1P12109 1028 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 IL15P40933 162 aaPredicted RBP6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 MECOMQ03112 1051 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 SPP2Q13103 211 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 MMRN1Q13201 1228 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 PABPC4Q13310 644 aaKnown RBP eCLIP6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 RRP1BQ14684 758 aaKnown RBP6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 SH3D19Q5HYK7 790 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 SLF2Q8IX21 1173 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 TBC1D2Q9BYX2 928 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 UBE2OQ9C0C9 1292 aaKnown RBP6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 OSBPL5Q9H0X9 879 aaPredicted RBP6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 C11orf49Q9H6J7 331 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 MORF4L1Q9UBU8 362 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 ABCF2Q9UG63 623 aa6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 PA2G4Q9UQ80 394 aaKnown RBP6.37□□□□□ -1.39
SNRNP40-204ENST00000474025 UBTFL1P0CB47 393 aaPredicted RBP6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 XRCC5P13010 732 aaKnown RBP6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 CYP2B6P20813 491 aa6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 CAP2P40123 477 aa6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 LRRC26Q2I0M4 334 aa6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 SPTY2D1Q68D10 685 aaPredicted RBP6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 FAM109BQ6ICB4 259 aaPredicted RBP6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 SOCS4Q8WXH5 440 aa6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 TXNRD2Q9NNW7 524 aa6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 COPRSQ9NQ92 184 aa6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 ATAD5Q96QE3 1844 aa6.36□□□□□ -1.39
SNRNP40-204ENST00000474025 BDP1A6H8Y1 2624 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 A0A1B0GUL7 405 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 USP17L5A8MUK1 530 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 PEX10O60683 326 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 MAP4K4O95819 1239 aaPredicted RBP6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 ZKSCAN1P17029 563 aaPredicted RBP6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 HOXA7P31268 230 aaPredicted RBP6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 TIMM10P62072 90 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 HERVK_113P62684 666 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 IRX3P78415 501 aaPredicted RBP6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 CACNB2Q08289 660 aaPredicted RBP6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 MTMR2Q13614 643 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 MVPQ14764 893 aaKnown RBP6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 PI16Q6UXB8 463 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 ERICH6Q7L0X2 663 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 USP6NLQ92738 828 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 NSUN4Q96CB9 384 aaKnown RBP6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 XAGE2Q96GT9 111 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 GUCD1Q96NT3 240 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms