RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 ZYXQ15942 572 aaKnown RBP14.54□□□□□ -0.08
SMPD4-217ENST00000473720 FOXP4Q8IVH2 680 aaPredicted RBP14.54□□□□□ -0.08
SMPD4-217ENST00000473720 CLASRPQ8N2M8 674 aaKnown RBP14.54□□□□□ -0.08
SMPD4-217ENST00000473720 COA7Q96BR5 231 aa14.54□□□□□ -0.08
SMPD4-217ENST00000473720 DNAJC2Q99543 621 aaKnown RBP14.54□□□□□ -0.08
SMPD4-217ENST00000473720 ASCC2Q9H1I8 757 aaPredicted RBP14.54□□□□□ -0.08
SMPD4-217ENST00000473720 TMOD4Q9NZQ9 345 aa14.54□□□□□ -0.08
SMPD4-217ENST00000473720 RCAN3Q9UKA8 241 aa14.54□□□□□ -0.08
SMPD4-217ENST00000473720 DDX19BQ9UMR2 479 aa14.54□□□□□ -0.08
SMPD4-217ENST00000473720 HMMRO75330 724 aa14.53□□□□□ -0.08
SMPD4-217ENST00000473720 IRX3P78415 501 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-217ENST00000473720 SLAIN1Q8ND83 568 aa14.53□□□□□ -0.08
SMPD4-217ENST00000473720 KIF1BPQ96EK5 621 aa14.53□□□□□ -0.08
SMPD4-217ENST00000473720 UNC93B1Q9H1C4 597 aa14.53□□□□□ -0.08
SMPD4-217ENST00000473720 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
SMPD4-217ENST00000473720 MAGEB6P1A0A0J9YX57 407 aa14.52□□□□□ -0.09
SMPD4-217ENST00000473720 GOLIM4O00461 696 aa14.52□□□□□ -0.09
SMPD4-217ENST00000473720 PEX10O60683 326 aa14.52□□□□□ -0.09
SMPD4-217ENST00000473720 GH2P01242 217 aa14.52□□□□□ -0.09
SMPD4-217ENST00000473720 FAM110CQ1W6H9 321 aa14.52□□□□□ -0.09
SMPD4-217ENST00000473720 RPAP2Q8IXW5 612 aaPredicted RBP14.52□□□□□ -0.09
SMPD4-217ENST00000473720 SHISA4Q96DD7 197 aa14.52□□□□□ -0.09
SMPD4-217ENST00000473720 EDC3Q96F86 508 aaKnown RBP14.52□□□□□ -0.09
SMPD4-217ENST00000473720 ZBTB21Q9ULJ3 1066 aa14.52□□□□□ -0.09
SMPD4-217ENST00000473720 COL11A1P12107 1806 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-217ENST00000473720 USP17L10C9JJH3 530 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 INHAP05111 366 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 POLR3DP05423 398 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-217ENST00000473720 GCLCP48506 637 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-217ENST00000473720 BACE1P56817 501 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 RAB3GAP1Q15042 981 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 TTF1Q15361 905 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-217ENST00000473720 SH3D19Q5HYK7 790 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 SLC9C2Q5TAH2 1124 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 SIRT2Q8IXJ6 389 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 NKX2-3Q8TAU0 364 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 DPF3Q92784 378 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 FEZ1Q99689 392 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 WDR18Q9BV38 432 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 ZBTB40Q9NUA8 1239 aa14.51□□□□□ -0.09
SMPD4-217ENST00000473720 FRMPD3Q5JV73 1810 aa14.5□□□□□ -0.09
SMPD4-217ENST00000473720 C20orf194Q5TEA3 1177 aa14.5□□□□□ -0.09
SMPD4-217ENST00000473720 METTL16Q86W50 562 aaKnown RBP14.5□□□□□ -0.09
SMPD4-217ENST00000473720 GCC1Q96CN9 775 aa14.5□□□□□ -0.09
SMPD4-217ENST00000473720 P2RX7Q99572 595 aaKnown RBP14.5□□□□□ -0.09
SMPD4-217ENST00000473720 BOLA2Q9H3K6 86 aa14.5□□□□□ -0.09
SMPD4-217ENST00000473720 SERPINB13Q9UIV8 391 aa14.5□□□□□ -0.09
SMPD4-217ENST00000473720 ZNF532Q9HCE3 1301 aa14.49□□□□□ -0.09
SMPD4-217ENST00000473720 C19orf81C9J6K1 198 aa14.49□□□□□ -0.09
SMPD4-217ENST00000473720 IGSF3O75054 1194 aa14.49□□□□□ -0.09
SMPD4-217ENST00000473720 GJB1P08034 283 aa14.49□□□□□ -0.09
SMPD4-217ENST00000473720 PDE6AP16499 860 aa14.49□□□□□ -0.09
SMPD4-217ENST00000473720 GJA8P48165 433 aa14.49□□□□□ -0.09
SMPD4-217ENST00000473720 CERKLQ49MI3 558 aaPredicted RBP14.49□□□□□ -0.09
SMPD4-217ENST00000473720 TTC6Q86TZ1 520 aa14.49□□□□□ -0.09
SMPD4-217ENST00000473720 CERS3Q8IU89 383 aa14.49□□□□□ -0.09
SMPD4-217ENST00000473720 U2AF1L4Q8WU68 220 aaKnown RBP14.49□□□□□ -0.09
SMPD4-217ENST00000473720 PAGR1Q9BTK6 254 aa14.49□□□□□ -0.09
SMPD4-217ENST00000473720 MYH4Q9Y623 1939 aa14.49□□□□□ -0.09
SMPD4-217ENST00000473720 PARP14Q460N5 1801 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 SMARCA5O60264 1052 aaPredicted RBP14.48□□□□□ -0.09
SMPD4-217ENST00000473720 RAB11FIP3O75154 756 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 TFRCP02786 760 aaKnown RBP14.48□□□□□ -0.09
SMPD4-217ENST00000473720 PLCD1P51178 756 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 HERVK_113P62684 666 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 EVX2Q03828 476 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 ABCB5Q2M3G0 1257 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 SLFNL1Q499Z3 407 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 USP17L2Q6R6M4 530 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 CCAR1Q8IX12 1150 aaKnown RBP14.48□□□□□ -0.09
SMPD4-217ENST00000473720 SDR42E1Q8WUS8 393 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 DEFB118Q96PH6 123 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 RIOK1Q9BRS2 568 aaKnown RBP14.48□□□□□ -0.09
SMPD4-217ENST00000473720 CRNKL1Q9BZJ0 848 aaKnown RBP14.48□□□□□ -0.09
SMPD4-217ENST00000473720 CHMP4BQ9H444 224 aaKnown RBP14.48□□□□□ -0.09
SMPD4-217ENST00000473720 CABP5Q9NP86 173 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 GINM1Q9NU53 330 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 MCM9Q9NXL9 1143 aa14.48□□□□□ -0.09
SMPD4-217ENST00000473720 MPHOSPH10O00566 681 aaKnown RBP14.47□□□□□ -0.09
SMPD4-217ENST00000473720 CYP2B6P20813 491 aa14.47□□□□□ -0.09
SMPD4-217ENST00000473720 IRF5Q13568 498 aa14.47□□□□□ -0.09
SMPD4-217ENST00000473720 HABP4Q5JVS0 413 aaKnown RBP14.47□□□□□ -0.09
SMPD4-217ENST00000473720 LCORLQ8N3X6 602 aa14.47□□□□□ -0.09
SMPD4-217ENST00000473720 PXYLP1Q8TE99 480 aa14.47□□□□□ -0.09
SMPD4-217ENST00000473720 CWC22Q9HCG8 908 aaKnown RBP14.47□□□□□ -0.09
SMPD4-217ENST00000473720 TXNRD2Q9NNW7 524 aa14.47□□□□□ -0.09
SMPD4-217ENST00000473720 EMILIN3Q9NT22 766 aa14.47□□□□□ -0.09
SMPD4-217ENST00000473720 PAG1Q9NWQ8 432 aa14.47□□□□□ -0.09
SMPD4-217ENST00000473720 H0YGN5 161 aa14.46□□□□□ -0.09
SMPD4-217ENST00000473720 FARP2O94887 1054 aaPredicted RBP14.46□□□□□ -0.09
SMPD4-217ENST00000473720 SGPL1O95470 568 aa14.46□□□□□ -0.09
SMPD4-217ENST00000473720 HOXA7P31268 230 aaPredicted RBP14.46□□□□□ -0.09
SMPD4-217ENST00000473720 TRIM32Q13049 653 aa14.46□□□□□ -0.09
SMPD4-217ENST00000473720 WDR78Q5VTH9 848 aa14.46□□□□□ -0.09
SMPD4-217ENST00000473720 TATDN1Q6P1N9 297 aa14.46□□□□□ -0.09
SMPD4-217ENST00000473720 GPRC5AQ8NFJ5 357 aa14.46□□□□□ -0.09
SMPD4-217ENST00000473720 EHD4Q9H223 541 aa14.46□□□□□ -0.09
SMPD4-217ENST00000473720 ARMT1Q9H993 441 aa14.46□□□□□ -0.09
SMPD4-217ENST00000473720 RLFQ13129 1914 aa14.45□□□□□ -0.1
SMPD4-217ENST00000473720 CYP2D6P10635 497 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 276.7 ms