RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 PHF20L1A8MW92 1017 aa15.71■□□□□ 0.11
SHROOM3-204ENST00000473602 SOX1O00570 391 aaPredicted RBP15.71■□□□□ 0.11
SHROOM3-204ENST00000473602 INHAP05111 366 aa15.71■□□□□ 0.11
SHROOM3-204ENST00000473602 PRRT2Q7Z6L0 340 aaPredicted RBP15.71■□□□□ 0.11
SHROOM3-204ENST00000473602 GPATCH3Q96I76 525 aa15.71■□□□□ 0.11
SHROOM3-204ENST00000473602 DEFB118Q96PH6 123 aa15.71■□□□□ 0.11
SHROOM3-204ENST00000473602 DNAJC2Q99543 621 aaKnown RBP15.71■□□□□ 0.11
SHROOM3-204ENST00000473602 PICK1Q9NRD5 415 aa15.71■□□□□ 0.11
SHROOM3-204ENST00000473602 STAP2Q9UGK3 403 aa15.71■□□□□ 0.11
SHROOM3-204ENST00000473602 FLT1P17948 1338 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 A0A1W2PPC1 479 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 GOLIM4O00461 696 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 CTNND1O60716 968 aaKnown RBP15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 PTPRAP18433 802 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 GADL1Q6ZQY3 521 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 SCYL3Q8IZE3 742 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 PXYLP1Q8TE99 480 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 TGFBRAP1Q8WUH2 860 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 LRCH3Q96II8 777 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 HAUS7Q99871 368 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 BCL11AQ9H165 835 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 ECHDC1Q9NTX5 307 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 PAG1Q9NWQ8 432 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 HERC5Q9UII4 1024 aaKnown RBP15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 AFG3L2Q9Y4W6 797 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 PHIPQ8WWQ0 1821 aa15.7■□□□□ 0.1
SHROOM3-204ENST00000473602 PTPRFP10586 1907 aa15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 TNPO2O14787 897 aaKnown RBP15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 SMARCA5O60264 1052 aaPredicted RBP15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 IRF5Q13568 498 aa15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 SLC9C2Q5TAH2 1124 aa15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 BOLA2Q9H3K6 86 aa15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 PI4KBQ9UBF8 816 aa15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 TAOK2Q9UL54 1235 aa15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 NAV1Q8NEY1 1877 aa15.69■□□□□ 0.1
SHROOM3-204ENST00000473602 DDX60LQ5H9U9 1706 aaKnown RBP15.68■□□□□ 0.1
SHROOM3-204ENST00000473602 SLURP2P0DP57 97 aa15.68■□□□□ 0.1
SHROOM3-204ENST00000473602 PDE6AP16499 860 aa15.68■□□□□ 0.1
SHROOM3-204ENST00000473602 MIGA1Q8NAN2 632 aa15.68■□□□□ 0.1
SHROOM3-204ENST00000473602 SMCR8Q8TEV9 937 aaPredicted RBP15.68■□□□□ 0.1
SHROOM3-204ENST00000473602 PAWRQ96IZ0 340 aaKnown RBP15.68■□□□□ 0.1
SHROOM3-204ENST00000473602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHROOM3-204ENST00000473602 PAK6Q9NQU5 681 aaPredicted RBP15.68■□□□□ 0.1
SHROOM3-204ENST00000473602 SLC45A1Q9Y2W3 748 aa15.68■□□□□ 0.1
SHROOM3-204ENST00000473602 CAPN2P17655 700 aa15.67■□□□□ 0.1
SHROOM3-204ENST00000473602 DYNLL1P63167 89 aaKnown RBP15.67■□□□□ 0.1
SHROOM3-204ENST00000473602 HDAC1Q13547 482 aaPredicted RBP15.67■□□□□ 0.1
SHROOM3-204ENST00000473602 FOXP4Q8IVH2 680 aaPredicted RBP15.67■□□□□ 0.1
SHROOM3-204ENST00000473602 MAPKAPK5Q8IW41 473 aa15.67■□□□□ 0.1
SHROOM3-204ENST00000473602 ANKRD13CQ8N6S4 541 aa15.67■□□□□ 0.1
SHROOM3-204ENST00000473602 RIOK1Q9BRS2 568 aaKnown RBP15.67■□□□□ 0.1
SHROOM3-204ENST00000473602 CRISPLD2Q9H0B8 497 aa15.67■□□□□ 0.1
SHROOM3-204ENST00000473602 TTC41PQ6P2S7 1318 aa15.67■□□□□ 0.1
SHROOM3-204ENST00000473602 ZNF532Q9HCE3 1301 aa15.67■□□□□ 0.1
SHROOM3-204ENST00000473602 MAGEB6P1A0A0J9YX57 407 aa15.66■□□□□ 0.1
SHROOM3-204ENST00000473602 TCRBV5S4A2TA0A5A2 114 aa15.66■□□□□ 0.1
SHROOM3-204ENST00000473602 TRIM75PA6NK02 468 aa15.66■□□□□ 0.1
SHROOM3-204ENST00000473602 HLA-DOAP06340 250 aa15.66■□□□□ 0.1
SHROOM3-204ENST00000473602 USP5P45974 858 aa15.66■□□□□ 0.1
SHROOM3-204ENST00000473602 NECAB2Q7Z6G3 386 aa15.66■□□□□ 0.1
SHROOM3-204ENST00000473602 METTL16Q86W50 562 aaKnown RBP15.66■□□□□ 0.1
SHROOM3-204ENST00000473602 COA7Q96BR5 231 aa15.66■□□□□ 0.1
SHROOM3-204ENST00000473602 EDC3Q96F86 508 aaKnown RBP15.66■□□□□ 0.1
SHROOM3-204ENST00000473602 TBC1D2Q9BYX2 928 aa15.66■□□□□ 0.1
SHROOM3-204ENST00000473602 ADD2P35612 726 aa15.65■□□□□ 0.1
SHROOM3-204ENST00000473602 ZSCAN25Q6NSZ9 544 aa15.65■□□□□ 0.1
SHROOM3-204ENST00000473602 CCDC84Q86UT8 332 aaPredicted RBP15.65■□□□□ 0.1
SHROOM3-204ENST00000473602 DIS3LQ8TF46 1054 aaKnown RBP15.65■□□□□ 0.1
SHROOM3-204ENST00000473602 TRIM34Q9BYJ4 488 aa15.65■□□□□ 0.1
SHROOM3-204ENST00000473602 CRNKL1Q9BZJ0 848 aaKnown RBP15.65■□□□□ 0.1
SHROOM3-204ENST00000473602 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.65■□□□□ 0.1
SHROOM3-204ENST00000473602 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
SHROOM3-204ENST00000473602 PALD1Q9ULE6 856 aa15.65■□□□□ 0.1
SHROOM3-204ENST00000473602 CUL9Q8IWT3 2517 aa15.65■□□□□ 0.1
SHROOM3-204ENST00000473602 FAM196BA6NMK8 535 aa15.64■□□□□ 0.09
SHROOM3-204ENST00000473602 ERC2O15083 957 aa15.64■□□□□ 0.09
SHROOM3-204ENST00000473602 CAP2P40123 477 aa15.64■□□□□ 0.09
SHROOM3-204ENST00000473602 UBE3CQ15386 1083 aa15.64■□□□□ 0.09
SHROOM3-204ENST00000473602 CRACR2BQ8N4Y2 399 aaPredicted RBP15.64■□□□□ 0.09
SHROOM3-204ENST00000473602 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.64■□□□□ 0.09
SHROOM3-204ENST00000473602 EHD4Q9H223 541 aa15.64■□□□□ 0.09
SHROOM3-204ENST00000473602 AGTPBP1Q9UPW5 1226 aa15.64■□□□□ 0.09
SHROOM3-204ENST00000473602 LOC285556D6RIA3 1793 aa15.63■□□□□ 0.09
SHROOM3-204ENST00000473602 TREML2Q5T2D2 321 aa15.63■□□□□ 0.09
SHROOM3-204ENST00000473602 TTC6Q86TZ1 520 aa15.63■□□□□ 0.09
SHROOM3-204ENST00000473602 C7orf61Q8IZ16 206 aa15.63■□□□□ 0.09
SHROOM3-204ENST00000473602 GDF15Q99988 308 aa15.63■□□□□ 0.09
SHROOM3-204ENST00000473602 GINM1Q9NU53 330 aa15.63■□□□□ 0.09
SHROOM3-204ENST00000473602 ZMYND8Q9ULU4 1186 aaPredicted RBP15.63■□□□□ 0.09
SHROOM3-204ENST00000473602 GLRX3O76003 335 aaKnown RBP15.62■□□□□ 0.09
SHROOM3-204ENST00000473602 ASNSP08243 561 aa15.62■□□□□ 0.09
SHROOM3-204ENST00000473602 BMP8BP34820 402 aa15.62■□□□□ 0.09
SHROOM3-204ENST00000473602 KBTBD3Q8NAB2 608 aa15.62■□□□□ 0.09
SHROOM3-204ENST00000473602 DNAJC18Q9H819 358 aa15.62■□□□□ 0.09
SHROOM3-204ENST00000473602 SAP30BPQ9UHR5 308 aaKnown RBP15.62■□□□□ 0.09
SHROOM3-204ENST00000473602 PNMA3Q9UL41 463 aa15.62■□□□□ 0.09
SHROOM3-204ENST00000473602 MYH8P13535 1937 aa15.62■□□□□ 0.09
SHROOM3-204ENST00000473602 MX1P20591 662 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms