RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 PRMT6Q96LA8 375 aaPredicted RBP17.3■□□□□ 0.36
LMNA-213ENST00000473598 MTA3Q9BTC8 594 aa17.3■□□□□ 0.36
LMNA-213ENST00000473598 GPHNQ9NQX3 736 aaPredicted RBP17.3■□□□□ 0.36
LMNA-213ENST00000473598 SH2B2O14492 632 aaPredicted RBP17.3■□□□□ 0.36
LMNA-213ENST00000473598 EGFRP00533 1210 aa17.3■□□□□ 0.36
LMNA-213ENST00000473598 CSPP1Q1MSJ5 1256 aa17.3■□□□□ 0.36
LMNA-213ENST00000473598 SKOR2Q2VWA4 1001 aaPredicted RBP17.3■□□□□ 0.36
LMNA-213ENST00000473598 MICALL2Q8IY33 904 aa17.3■□□□□ 0.36
LMNA-213ENST00000473598 IGDCC4Q8TDY8 1250 aa17.3■□□□□ 0.36
LMNA-213ENST00000473598 IDI2Q9BXS1 227 aa17.3■□□□□ 0.36
LMNA-213ENST00000473598 OSBPL5Q9H0X9 879 aaPredicted RBP17.3■□□□□ 0.36
LMNA-213ENST00000473598 TMEM51Q9NW97 253 aa17.3■□□□□ 0.36
LMNA-213ENST00000473598 ANGEL1Q9UNK9 670 aaKnown RBP17.3■□□□□ 0.36
LMNA-213ENST00000473598 R3HCC1Q9Y3T6 440 aaKnown RBP17.3■□□□□ 0.36
LMNA-213ENST00000473598 SPDYE2BA6NHP3 402 aa17.29■□□□□ 0.36
LMNA-213ENST00000473598 PRDM1O75626 825 aa17.29■□□□□ 0.36
LMNA-213ENST00000473598 SPDYE6P0CI01 402 aa17.29■□□□□ 0.36
LMNA-213ENST00000473598 RPS12P25398 132 aaKnown RBP17.29■□□□□ 0.36
LMNA-213ENST00000473598 ST3GAL1Q11201 340 aa17.29■□□□□ 0.36
LMNA-213ENST00000473598 NFIAQ12857 509 aa17.29■□□□□ 0.36
LMNA-213ENST00000473598 CCDC83Q8IWF9 413 aa17.29■□□□□ 0.36
LMNA-213ENST00000473598 MTMR14Q8NCE2 650 aa17.29■□□□□ 0.36
LMNA-213ENST00000473598 DYNLL2Q96FJ2 89 aa17.29■□□□□ 0.36
LMNA-213ENST00000473598 ZNF274Q96GC6 653 aaPredicted RBP17.29■□□□□ 0.36
LMNA-213ENST00000473598 CNOT7Q9UIV1 285 aaKnown RBP17.29■□□□□ 0.36
LMNA-213ENST00000473598 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
LMNA-213ENST00000473598 POTEIP0CG38 1075 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 POTEJP0CG39 1038 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
LMNA-213ENST00000473598 NT5C2P49902 561 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 MMP14P50281 582 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 DLGAP5Q15398 846 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 NECAB1Q8N987 351 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 ANP32BQ92688 251 aaKnown RBP17.28■□□□□ 0.36
LMNA-213ENST00000473598 TDRD3Q9H7E2 651 aaKnown RBP17.28■□□□□ 0.36
LMNA-213ENST00000473598 HACL1Q9UJ83 578 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
LMNA-213ENST00000473598 KIF3CO14782 793 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 IFIT3O14879 490 aaKnown RBP17.28■□□□□ 0.36
LMNA-213ENST00000473598 RANBP6O60518 1105 aaKnown RBP17.28■□□□□ 0.36
LMNA-213ENST00000473598 LMOD1P29536 600 aaPredicted RBP17.28■□□□□ 0.36
LMNA-213ENST00000473598 LIFRP42702 1097 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 STK3Q13188 491 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 SART3Q15020 963 aaKnown RBP17.28■□□□□ 0.36
LMNA-213ENST00000473598 C16orf86Q6ZW13 317 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 TTC6Q86TZ1 520 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
LMNA-213ENST00000473598 SIPA1L1O43166 1804 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 PFKFB2O60825 505 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 PDIA3P30101 505 aaKnown RBP17.27■□□□□ 0.36
LMNA-213ENST00000473598 EPHX2P34913 555 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 CACNB3P54284 484 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 TMEM67Q5HYA8 995 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 DPF2Q92785 391 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 GTF3C6Q969F1 213 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 ZKSCAN3Q9BRR0 538 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 TAF1DQ9H5J8 278 aaPredicted RBP17.27■□□□□ 0.36
LMNA-213ENST00000473598 LY9Q9HBG7 655 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 ZNF287Q9HBT7 754 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 FAM198AQ9UFP1 575 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 SCN4AP35499 1836 aa17.27■□□□□ 0.36
LMNA-213ENST00000473598 ERICH2A1L162 156 aa17.26■□□□□ 0.35
LMNA-213ENST00000473598 IQCA1LA6NCM1 817 aa17.26■□□□□ 0.35
LMNA-213ENST00000473598 PKP1Q13835 747 aa17.26■□□□□ 0.35
LMNA-213ENST00000473598 RBM26Q5T8P6 1007 aaKnown RBP17.26■□□□□ 0.35
LMNA-213ENST00000473598 SGMS1Q86VZ5 419 aa17.26■□□□□ 0.35
LMNA-213ENST00000473598 TRPM4Q8TD43 1214 aa17.26■□□□□ 0.35
LMNA-213ENST00000473598 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
LMNA-213ENST00000473598 KLF18A0A0U1RQI7 1052 aa17.26■□□□□ 0.35
LMNA-213ENST00000473598 BAG4O95429 457 aaKnown RBP17.26■□□□□ 0.35
LMNA-213ENST00000473598 SCRN1Q12765 414 aa17.26■□□□□ 0.35
LMNA-213ENST00000473598 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
LMNA-213ENST00000473598 MKNK2Q9HBH9 465 aa17.26■□□□□ 0.35
LMNA-213ENST00000473598 CDK8P49336 464 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 ZNF280AP59817 542 aaPredicted RBP17.25■□□□□ 0.35
LMNA-213ENST00000473598 EAPPQ56P03 285 aaPredicted RBP17.25■□□□□ 0.35
LMNA-213ENST00000473598 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 ZFPM1Q8IX07 1006 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 SLC44A5Q8NCS7 719 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 ZBED3Q96IU2 234 aaPredicted RBP17.25■□□□□ 0.35
LMNA-213ENST00000473598 ZSCAN10Q96SZ4 725 aaPredicted RBP17.25■□□□□ 0.35
LMNA-213ENST00000473598 DHX36Q9H2U1 1008 aaKnown RBP17.25■□□□□ 0.35
LMNA-213ENST00000473598 SENP2Q9HC62 589 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 MYOZ2Q9NPC6 264 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 TSPY2A6NKD2 308 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 ENTPD3O75355 529 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
LMNA-213ENST00000473598 GABPAQ06546 454 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 TCP10Q12799 353 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 WTAPQ15007 396 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 TMTC2Q8N394 836 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 TMOD2Q9NZR1 351 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 ZDHHC9Q9Y397 364 aa17.25■□□□□ 0.35
LMNA-213ENST00000473598 TNKSO95271 1327 aa17.24■□□□□ 0.35
LMNA-213ENST00000473598 COL2A1P02458 1487 aaPredicted RBP17.24■□□□□ 0.35
LMNA-213ENST00000473598 H7C1D1 291 aa17.24■□□□□ 0.35
LMNA-213ENST00000473598 HLA-DOAP06340 250 aa17.24■□□□□ 0.35
LMNA-213ENST00000473598 RASA1P20936 1047 aa17.24■□□□□ 0.35
LMNA-213ENST00000473598 SEC23AQ15436 765 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms