RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 UBE3DQ7Z6J8 389 aa9.38□□□□□ -0.91
SEC22A-204ENST00000473494 FAM13CQ8NE31 585 aa9.38□□□□□ -0.91
SEC22A-204ENST00000473494 ISL2Q96A47 359 aa9.38□□□□□ -0.91
SEC22A-204ENST00000473494 MRFAP1L1Q96HT8 127 aa9.38□□□□□ -0.91
SEC22A-204ENST00000473494 DEPDC7Q96QD5 511 aa9.38□□□□□ -0.91
SEC22A-204ENST00000473494 CEP41Q9BYV8 373 aa9.38□□□□□ -0.91
SEC22A-204ENST00000473494 UPK3BL1B0FP48 263 aa9.37□□□□□ -0.91
SEC22A-204ENST00000473494 UPK3BL2E5RIL1 263 aa9.37□□□□□ -0.91
SEC22A-204ENST00000473494 HCLS1P14317 486 aaPredicted RBP9.37□□□□□ -0.91
SEC22A-204ENST00000473494 DRD2P14416 443 aa9.37□□□□□ -0.91
SEC22A-204ENST00000473494 YARSP54577 528 aaKnown RBP9.37□□□□□ -0.91
SEC22A-204ENST00000473494 NRG1Q02297 640 aaPredicted RBP9.37□□□□□ -0.91
SEC22A-204ENST00000473494 FXNQ16595 210 aa9.37□□□□□ -0.91
SEC22A-204ENST00000473494 NKG7Q16617 165 aa9.37□□□□□ -0.91
SEC22A-204ENST00000473494 ARSHQ5FYA8 562 aa9.37□□□□□ -0.91
SEC22A-204ENST00000473494 DYMQ7RTS9 669 aa9.37□□□□□ -0.91
SEC22A-204ENST00000473494 ALYREFQ86V81 257 aaKnown RBP9.37□□□□□ -0.91
SEC22A-204ENST00000473494 C12orf50Q8NA57 414 aaPredicted RBP9.37□□□□□ -0.91
SEC22A-204ENST00000473494 SCARF2Q96GP6 870 aaPredicted RBP9.37□□□□□ -0.91
SEC22A-204ENST00000473494 SRPK1Q96SB4 655 aaKnown RBP9.37□□□□□ -0.91
SEC22A-204ENST00000473494 PIDD1Q9HB75 910 aa9.37□□□□□ -0.91
SEC22A-204ENST00000473494 FAM105AQ9NUU6 356 aa9.37□□□□□ -0.91
SEC22A-204ENST00000473494 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.36□□□□□ -0.91
SEC22A-204ENST00000473494 CHURC1-FNTBB4DL54 471 aa9.36□□□□□ -0.91
SEC22A-204ENST00000473494 CCNFP41002 786 aa9.36□□□□□ -0.91
SEC22A-204ENST00000473494 SLBPQ14493 270 aaKnown RBP eCLIP9.36□□□□□ -0.91
SEC22A-204ENST00000473494 PPP2R5EQ16537 467 aa9.36□□□□□ -0.91
SEC22A-204ENST00000473494 LARP1BQ659C4 914 aaKnown RBP9.36□□□□□ -0.91
SEC22A-204ENST00000473494 UNC5AQ6ZN44 842 aa9.36□□□□□ -0.91
SEC22A-204ENST00000473494 JAZF1Q86VZ6 243 aa9.36□□□□□ -0.91
SEC22A-204ENST00000473494 FAM177A1Q8N128 213 aaPredicted RBP9.36□□□□□ -0.91
SEC22A-204ENST00000473494 SLC9A7Q96T83 725 aa9.36□□□□□ -0.91
SEC22A-204ENST00000473494 CCDC113Q9H0I3 377 aa9.36□□□□□ -0.91
SEC22A-204ENST00000473494 C9orf172C9J069 976 aa9.35□□□□□ -0.91
SEC22A-204ENST00000473494 RAG1P15918 1043 aa9.35□□□□□ -0.91
SEC22A-204ENST00000473494 ASPAP45381 313 aa9.35□□□□□ -0.91
SEC22A-204ENST00000473494 INSM1Q01101 510 aaPredicted RBP9.35□□□□□ -0.91
SEC22A-204ENST00000473494 RASGRF1Q13972 1273 aa9.35□□□□□ -0.91
SEC22A-204ENST00000473494 ZYXQ15942 572 aaKnown RBP9.35□□□□□ -0.91
SEC22A-204ENST00000473494 UVSSAQ2YD98 709 aa9.35□□□□□ -0.91
SEC22A-204ENST00000473494 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.35□□□□□ -0.91
SEC22A-204ENST00000473494 MICAL1Q8TDZ2 1067 aa9.35□□□□□ -0.91
SEC22A-204ENST00000473494 ACSS3Q9H6R3 686 aa9.35□□□□□ -0.91
SEC22A-204ENST00000473494 PHAXQ9H814 394 aaKnown RBP9.35□□□□□ -0.91
SEC22A-204ENST00000473494 USP21Q9UK80 565 aa9.35□□□□□ -0.91
SEC22A-204ENST00000473494 CADPSQ9ULU8 1353 aa9.35□□□□□ -0.91
SEC22A-204ENST00000473494 TLDC2A0PJX2 215 aa9.34□□□□□ -0.91
SEC22A-204ENST00000473494 ALX3O95076 343 aa9.34□□□□□ -0.91
SEC22A-204ENST00000473494 CST3P01034 146 aaPredicted RBP9.34□□□□□ -0.91
SEC22A-204ENST00000473494 CANXP27824 592 aaKnown RBP9.34□□□□□ -0.91
SEC22A-204ENST00000473494 NOS3P29474 1203 aa9.34□□□□□ -0.91
SEC22A-204ENST00000473494 ADGRE1Q14246 886 aa9.34□□□□□ -0.91
SEC22A-204ENST00000473494 MBTPS1Q14703 1052 aa9.34□□□□□ -0.91
SEC22A-204ENST00000473494 PRAMEF13Q5VWM6 474 aa9.34□□□□□ -0.91
SEC22A-204ENST00000473494 SMYD4Q8IYR2 804 aaPredicted RBP9.34□□□□□ -0.91
SEC22A-204ENST00000473494 CYB5D2Q8WUJ1 264 aa9.34□□□□□ -0.91
SEC22A-204ENST00000473494 FAM46AQ96IP4 442 aaKnown RBP9.34□□□□□ -0.91
SEC22A-204ENST00000473494 LTBP3Q9NS15 1303 aa9.33□□□□□ -0.92
SEC22A-204ENST00000473494 FAM221BA6H8Z2 402 aa9.33□□□□□ -0.92
SEC22A-204ENST00000473494 B2RBV5 119 aa9.33□□□□□ -0.92
SEC22A-204ENST00000473494 RGS13O14921 159 aa9.33□□□□□ -0.92
SEC22A-204ENST00000473494 GJB6O95452 261 aa9.33□□□□□ -0.92
SEC22A-204ENST00000473494 APBA3O96018 575 aa9.33□□□□□ -0.92
SEC22A-204ENST00000473494 GLB1P16278 677 aa9.33□□□□□ -0.92
SEC22A-204ENST00000473494 POLR2BP30876 1174 aaKnown RBP9.33□□□□□ -0.92
SEC22A-204ENST00000473494 CDC37L1Q7L3B6 337 aa9.33□□□□□ -0.92
SEC22A-204ENST00000473494 NLGN1Q8N2Q7 840 aa9.33□□□□□ -0.92
SEC22A-204ENST00000473494 PDPK1O15530 556 aa9.32□□□□□ -0.92
SEC22A-204ENST00000473494 GAS2O43903 313 aaKnown RBP9.32□□□□□ -0.92
SEC22A-204ENST00000473494 LRIG2O94898 1065 aa9.32□□□□□ -0.92
SEC22A-204ENST00000473494 MRM1Q6IN84 353 aaKnown RBP9.32□□□□□ -0.92
SEC22A-204ENST00000473494 C6orf15Q6UXA7 325 aaPredicted RBP9.32□□□□□ -0.92
SEC22A-204ENST00000473494 ARMCX6Q7L4S7 300 aa9.32□□□□□ -0.92
SEC22A-204ENST00000473494 FAM178BQ8IXR5 827 aa9.32□□□□□ -0.92
SEC22A-204ENST00000473494 WFDC12Q8WWY7 111 aa9.32□□□□□ -0.92
SEC22A-204ENST00000473494 DPH2Q9BQC3 489 aaPredicted RBP9.32□□□□□ -0.92
SEC22A-204ENST00000473494 FOXQ1Q9C009 403 aa9.32□□□□□ -0.92
SEC22A-204ENST00000473494 ST7Q9NRC1 585 aa9.32□□□□□ -0.92
SEC22A-204ENST00000473494 RNGTTO60942 597 aaKnown RBP9.31□□□□□ -0.92
SEC22A-204ENST00000473494 UBOX5O94941 541 aa9.31□□□□□ -0.92
SEC22A-204ENST00000473494 NCAPHQ15003 741 aa9.31□□□□□ -0.92
SEC22A-204ENST00000473494 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
SEC22A-204ENST00000473494 EZH1Q92800 747 aaPredicted RBP9.31□□□□□ -0.92
SEC22A-204ENST00000473494 UBL7Q96S82 380 aaPredicted RBP9.31□□□□□ -0.92
SEC22A-204ENST00000473494 PCOLCE2Q9UKZ9 415 aa9.31□□□□□ -0.92
SEC22A-204ENST00000473494 SART1O43290 800 aaKnown RBP9.3□□□□□ -0.92
SEC22A-204ENST00000473494 RAB6AP20340 208 aa9.3□□□□□ -0.92
SEC22A-204ENST00000473494 SDE2Q6IQ49 451 aa9.3□□□□□ -0.92
SEC22A-204ENST00000473494 VHLLQ6RSH7 139 aa9.3□□□□□ -0.92
SEC22A-204ENST00000473494 DZIP1LQ8IYY4 767 aaKnown RBP9.3□□□□□ -0.92
SEC22A-204ENST00000473494 KLHL6Q8WZ60 621 aa9.3□□□□□ -0.92
SEC22A-204ENST00000473494 CCDC74BQ96LY2 380 aa9.3□□□□□ -0.92
SEC22A-204ENST00000473494 YIPF2Q9BWQ6 316 aa9.3□□□□□ -0.92
SEC22A-204ENST00000473494 SEMA6CQ9H3T2 930 aa9.3□□□□□ -0.92
SEC22A-204ENST00000473494 ZNF214Q9UL59 606 aaPredicted RBP9.3□□□□□ -0.92
SEC22A-204ENST00000473494 CCDC85CA6NKD9 419 aa9.29□□□□□ -0.92
SEC22A-204ENST00000473494 DDAH1O94760 285 aa9.29□□□□□ -0.92
SEC22A-204ENST00000473494 CDPF1Q6NVV7 123 aa9.29□□□□□ -0.92
SEC22A-204ENST00000473494 TXNRD3Q86VQ6 643 aa9.29□□□□□ -0.92
SEC22A-204ENST00000473494 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms