RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	RAB11FIP3	O75154	756 aa		10.84	□□□□□ -0.67
CHEK2-223	ENST00000472807	EN2	P19622	333 aa	Predicted RBP	10.84	□□□□□ -0.67
CHEK2-223	ENST00000472807	GRK4	P32298	578 aa		10.84	□□□□□ -0.67
CHEK2-223	ENST00000472807	PRKCZ	Q05513	592 aa		10.84	□□□□□ -0.67
CHEK2-223	ENST00000472807	RRP1B	Q14684	758 aa	Known RBP	10.84	□□□□□ -0.67
CHEK2-223	ENST00000472807	METTL16	Q86W50	562 aa	Known RBP	10.84	□□□□□ -0.67
CHEK2-223	ENST00000472807	BCL11A	Q9H165	835 aa		10.84	□□□□□ -0.67
CHEK2-223	ENST00000472807	ANTXR1	Q9H6X2	564 aa		10.84	□□□□□ -0.67
CHEK2-223	ENST00000472807	DNAJC18	Q9H819	358 aa		10.84	□□□□□ -0.67
CHEK2-223	ENST00000472807	GINM1	Q9NU53	330 aa		10.84	□□□□□ -0.67
CHEK2-223	ENST00000472807	TNPO2	O14787	897 aa	Known RBP	10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	GDF11	O95390	407 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	GCLC	P48506	637 aa	Predicted RBP	10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	MTMR2	Q13614	643 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	PDE3A	Q14432	1141 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	FAM110C	Q1W6H9	321 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	SIRT2	Q8IXJ6	389 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	ANKRD13C	Q8N6S4	541 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	SLAIN1	Q8ND83	568 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	DNAJC2	Q99543	621 aa	Known RBP	10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	WDR18	Q9BV38	432 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	TMOD4	Q9NZQ9	345 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	BIN2	Q9UBW5	565 aa	Predicted RBP	10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	ZBTB21	Q9ULJ3	1066 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	NAV1	Q8NEY1	1877 aa		10.83	□□□□□ -0.68
CHEK2-223	ENST00000472807	DDX60L	Q5H9U9	1706 aa	Known RBP	10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	MAGEB6P1	A0A0J9YX57	407 aa		10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	GOLIM4	O00461	696 aa		10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	PDE6A	P16499	860 aa		10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	BACE1	P56817	501 aa		10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	UBXN2A	P68543	259 aa		10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	IRX3	P78415	501 aa	Predicted RBP	10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	SH3D19	Q5HYK7	790 aa		10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	SLC9C2	Q5TAH2	1124 aa		10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	COA7	Q96BR5	231 aa		10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	EHD4	Q9H223	541 aa		10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	SERPINB13	Q9UIV8	391 aa		10.82	□□□□□ -0.68
CHEK2-223	ENST00000472807	C19orf81	C9J6K1	198 aa		10.81	□□□□□ -0.68
CHEK2-223	ENST00000472807	USP17L10	C9JJH3	530 aa		10.81	□□□□□ -0.68
CHEK2-223	ENST00000472807	FLT3LG	P49771	235 aa		10.81	□□□□□ -0.68
CHEK2-223	ENST00000472807	TTC6	Q86TZ1	520 aa		10.81	□□□□□ -0.68
CHEK2-223	ENST00000472807	NKX2-3	Q8TAU0	364 aa		10.81	□□□□□ -0.68
CHEK2-223	ENST00000472807	FEZ1	Q99689	392 aa		10.81	□□□□□ -0.68
CHEK2-223	ENST00000472807	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.81	□□□□□ -0.68
CHEK2-223	ENST00000472807	GABRQ	Q9UN88	632 aa		10.81	□□□□□ -0.68
CHEK2-223	ENST00000472807	ZNF532	Q9HCE3	1301 aa		10.81	□□□□□ -0.68
CHEK2-223	ENST00000472807	ADCY3	O60266	1144 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	GH2	P01242	217 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	POLR3D	P05423	398 aa	Predicted RBP	10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	CCL5	P13501	91 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	JAG1	P78504	1218 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	IRF5	Q13568	498 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	MTFR1	Q15390	333 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	C20orf194	Q5TEA3	1177 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	RIOK1	Q9BRS2	568 aa	Known RBP	10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	LRRCC1	Q9C099	1032 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	RNF208	Q9H0X6	261 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	PAG1	Q9NWQ8	432 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	TAOK2	Q9UL54	1235 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	DOCK3	Q8IZD9	2030 aa		10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	RANBP2	P49792	3224 aa	Known RBP	10.8	□□□□□ -0.68
CHEK2-223	ENST00000472807	SLC34A2	O95436	690 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	ATP5J	P18859	108 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	HOXA7	P31268	230 aa	Predicted RBP	10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	RAB3GAP1	Q15042	981 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	ABCB5	Q2M3G0	1257 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	CERKL	Q49MI3	558 aa	Predicted RBP	10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	TATDN1	Q6P1N9	297 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	USP17L2	Q6R6M4	530 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	PXYLP1	Q8TE99	480 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	GCC1	Q96CN9	775 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	BOLA2	Q9H3K6	86 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	CABP5	Q9NP86	173 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	MCM9	Q9NXL9	1143 aa		10.79	□□□□□ -0.68
CHEK2-223	ENST00000472807	MYH7	P12883	1935 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	TCRBV5S4A2T	A0A5A2	114 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	INHA	P05111	366 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	GJB1	P08034	283 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	ELN	P15502	786 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	USP14	P54578	494 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	HERVK_113	P62684	666 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	LCORL	Q8N3X6	602 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	SHISA4	Q96DD7	197 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	EDC3	Q96F86	508 aa	Known RBP	10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	GPATCH3	Q96I76	525 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	HAUS7	Q99871	368 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	MORF4L1	Q9UBU8	362 aa		10.78	□□□□□ -0.68
CHEK2-223	ENST00000472807	MBD4	O95243	580 aa		10.77	□□□□□ -0.69
CHEK2-223	ENST00000472807	SHMT1	P34896	483 aa		10.77	□□□□□ -0.69
CHEK2-223	ENST00000472807	ADD2	P35612	726 aa		10.77	□□□□□ -0.69
CHEK2-223	ENST00000472807	GJA8	P48165	433 aa		10.77	□□□□□ -0.69
CHEK2-223	ENST00000472807	PLCD1	P51178	756 aa		10.77	□□□□□ -0.69
CHEK2-223	ENST00000472807	ZYX	Q15942	572 aa	Known RBP	10.77	□□□□□ -0.69
CHEK2-223	ENST00000472807	ZSCAN25	Q6NSZ9	544 aa		10.77	□□□□□ -0.69
CHEK2-223	ENST00000472807	CCAR1	Q8IX12	1150 aa	Known RBP	10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms