RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 RBAK-RBAKDNI3L0D1 243 aa9.16□□□□□ -0.94
CLK1-209ENST00000472679 LEFTY1O75610 366 aa9.16□□□□□ -0.94
CLK1-209ENST00000472679 IGLV1-40P01703 118 aa9.16□□□□□ -0.94
CLK1-209ENST00000472679 F13BP05160 661 aa9.16□□□□□ -0.94
CLK1-209ENST00000472679 CAP2P40123 477 aa9.16□□□□□ -0.94
CLK1-209ENST00000472679 SOX9P48436 509 aa9.16□□□□□ -0.94
CLK1-209ENST00000472679 NASPP49321 788 aaPredicted RBP9.16□□□□□ -0.94
CLK1-209ENST00000472679 ZC3H6P61129 1189 aaKnown RBP9.16□□□□□ -0.94
CLK1-209ENST00000472679 FOXQ1Q9C009 403 aa9.16□□□□□ -0.94
CLK1-209ENST00000472679 KLHL3Q9UH77 587 aa9.16□□□□□ -0.94
CLK1-209ENST00000472679 FAM170BA6NMN3 283 aa9.15□□□□□ -0.94
CLK1-209ENST00000472679 LRIG2O94898 1065 aa9.15□□□□□ -0.94
CLK1-209ENST00000472679 CST3P01034 146 aaPredicted RBP9.15□□□□□ -0.94
CLK1-209ENST00000472679 ATF4P18848 351 aaPredicted RBP9.15□□□□□ -0.94
CLK1-209ENST00000472679 NAALADL2Q58DX5 795 aa9.15□□□□□ -0.94
CLK1-209ENST00000472679 SLC6A19Q695T7 634 aa9.15□□□□□ -0.94
CLK1-209ENST00000472679 CCDC81Q6ZN84 652 aa9.15□□□□□ -0.94
CLK1-209ENST00000472679 XAGE3Q8WTP9 111 aa9.15□□□□□ -0.94
CLK1-209ENST00000472679 SPATA32Q96LK8 384 aa9.15□□□□□ -0.94
CLK1-209ENST00000472679 DBNDD2Q9BQY9 259 aa9.15□□□□□ -0.94
CLK1-209ENST00000472679 SLC22A31A6NKX4 558 aa9.14□□□□□ -0.95
CLK1-209ENST00000472679 FAM87AP0C7U9 286 aa9.14□□□□□ -0.95
CLK1-209ENST00000472679 PRSS36Q5K4E3 855 aa9.14□□□□□ -0.95
CLK1-209ENST00000472679 TOP6BLQ8N6T0 577 aa9.14□□□□□ -0.95
CLK1-209ENST00000472679 FAM13CQ8NE31 585 aa9.14□□□□□ -0.95
CLK1-209ENST00000472679 SHKBP1Q8TBC3 707 aa9.14□□□□□ -0.95
CLK1-209ENST00000472679 DUSP23Q9BVJ7 150 aa9.14□□□□□ -0.95
CLK1-209ENST00000472679 ZNRF3Q9ULT6 936 aa9.14□□□□□ -0.95
CLK1-209ENST00000472679 WDR64B1ANS9 1081 aa9.13□□□□□ -0.95
CLK1-209ENST00000472679 SLITRK5O94991 958 aa9.13□□□□□ -0.95
CLK1-209ENST00000472679 GNL2Q13823 731 aaKnown RBP9.13□□□□□ -0.95
CLK1-209ENST00000472679 COL9A2Q14055 689 aaPredicted RBP9.13□□□□□ -0.95
CLK1-209ENST00000472679 RIN3Q8TB24 985 aa9.13□□□□□ -0.95
CLK1-209ENST00000472679 SEC16BQ96JE7 1060 aa9.13□□□□□ -0.95
CLK1-209ENST00000472679 FERD3LQ96RJ6 166 aa9.13□□□□□ -0.95
CLK1-209ENST00000472679 PRDM10Q9NQV6 1147 aa9.13□□□□□ -0.95
CLK1-209ENST00000472679 FBXW10Q5XX13 1052 aa9.12□□□□□ -0.95
CLK1-209ENST00000472679 OVOS1Q6IE37 1185 aa9.12□□□□□ -0.95
CLK1-209ENST00000472679 OGFOD3Q6PK18 319 aa9.12□□□□□ -0.95
CLK1-209ENST00000472679 ZNF765Q7L2R6 523 aa9.12□□□□□ -0.95
CLK1-209ENST00000472679 SLC43A3Q8NBI5 491 aa9.12□□□□□ -0.95
CLK1-209ENST00000472679 GMIPQ9P107 970 aa9.12□□□□□ -0.95
CLK1-209ENST00000472679 DNAJA1P31689 397 aaKnown RBP9.11□□□□□ -0.95
CLK1-209ENST00000472679 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
CLK1-209ENST00000472679 ZDHHC13Q8IUH4 622 aa9.11□□□□□ -0.95
CLK1-209ENST00000472679 ATG4CQ96DT6 458 aa9.11□□□□□ -0.95
CLK1-209ENST00000472679 C8orf37Q96NL8 207 aa9.11□□□□□ -0.95
CLK1-209ENST00000472679 MIPEPQ99797 713 aa9.11□□□□□ -0.95
CLK1-209ENST00000472679 CNTNAP4Q9C0A0 1308 aa9.1□□□□□ -0.95
CLK1-209ENST00000472679 K7ELQ4 463 aaPredicted RBP9.1□□□□□ -0.95
CLK1-209ENST00000472679 GSC2O15499 205 aa9.1□□□□□ -0.95
CLK1-209ENST00000472679 YARSP54577 528 aaKnown RBP9.1□□□□□ -0.95
CLK1-209ENST00000472679 ARID5AQ03989 594 aa9.1□□□□□ -0.95
CLK1-209ENST00000472679 MLECQ14165 292 aa9.1□□□□□ -0.95
CLK1-209ENST00000472679 VPS37DQ86XT2 251 aa9.1□□□□□ -0.95
CLK1-209ENST00000472679 SLFN12Q8IYM2 578 aa9.1□□□□□ -0.95
CLK1-209ENST00000472679 MFSD2AQ8NA29 543 aa9.1□□□□□ -0.95
CLK1-209ENST00000472679 TMEM40Q8WWA1 233 aa9.1□□□□□ -0.95
CLK1-209ENST00000472679 SRRTQ9BXP5 876 aaKnown RBP9.1□□□□□ -0.95
CLK1-209ENST00000472679 PRR19A6NJB7 356 aa9.09□□□□□ -0.95
CLK1-209ENST00000472679 MEIS3P2A8K0S8 358 aa9.09□□□□□ -0.95
CLK1-209ENST00000472679 EOMESO95936 686 aa9.09□□□□□ -0.95
CLK1-209ENST00000472679 LETMD1Q6P1Q0 360 aa9.09□□□□□ -0.95
CLK1-209ENST00000472679 RUFY4Q6ZNE9 571 aa9.09□□□□□ -0.95
CLK1-209ENST00000472679 FAM214BQ7L5A3 538 aa9.09□□□□□ -0.95
CLK1-209ENST00000472679 PPP1R13LQ8WUF5 828 aa9.09□□□□□ -0.95
CLK1-209ENST00000472679 KIF2CQ99661 725 aa9.09□□□□□ -0.95
CLK1-209ENST00000472679 CNNM2Q9H8M5 875 aa9.09□□□□□ -0.95
CLK1-209ENST00000472679 FGRP09769 529 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 IMPDH2P12268 514 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 POLR2BP30876 1174 aaKnown RBP9.08□□□□□ -0.96
CLK1-209ENST00000472679 CDCP2Q5VXM1 449 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 CDH24Q86UP0 819 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 LSRQ86X29 649 aaPredicted RBP9.08□□□□□ -0.96
CLK1-209ENST00000472679 MCF2L2Q86YR7 1114 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 GIMAP7Q8NHV1 300 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 BAHD1Q8TBE0 780 aaPredicted RBP9.08□□□□□ -0.96
CLK1-209ENST00000472679 CYB5D2Q8WUJ1 264 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 SHDQ96IW2 340 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 HEXIM2Q96MH2 286 aaKnown RBP9.08□□□□□ -0.96
CLK1-209ENST00000472679 GMLQ99445 158 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 OSBPL1AQ9BXW6 950 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 ATG3Q9NT62 314 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 U3KQE9 123 aa9.08□□□□□ -0.96
CLK1-209ENST00000472679 NME1P15531 152 aaKnown RBP9.07□□□□□ -0.96
CLK1-209ENST00000472679 EIF6P56537 245 aaKnown RBP9.07□□□□□ -0.96
CLK1-209ENST00000472679 LRRFIP1Q32MZ4 808 aaKnown RBP9.07□□□□□ -0.96
CLK1-209ENST00000472679 NLRC3Q7RTR2 1065 aa9.07□□□□□ -0.96
CLK1-209ENST00000472679 SLC51AQ86UW1 340 aa9.07□□□□□ -0.96
CLK1-209ENST00000472679 PHACTR4Q8IZ21 702 aa9.07□□□□□ -0.96
CLK1-209ENST00000472679 RBBP8NLQ8NC74 664 aaPredicted RBP9.07□□□□□ -0.96
CLK1-209ENST00000472679 DNAJB8Q8NHS0 232 aa9.07□□□□□ -0.96
CLK1-209ENST00000472679 CPLX3Q8WVH0 158 aa9.07□□□□□ -0.96
CLK1-209ENST00000472679 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.07□□□□□ -0.968e-10■□□□□ 10.6
CLK1-209ENST00000472679 ADAM23O75077 832 aa9.06□□□□□ -0.96
CLK1-209ENST00000472679 ACRP10323 421 aa9.06□□□□□ -0.96
CLK1-209ENST00000472679 RAG1P15918 1043 aa9.06□□□□□ -0.96
CLK1-209ENST00000472679 GIPRP48546 466 aa9.06□□□□□ -0.96
CLK1-209ENST00000472679 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
CLK1-209ENST00000472679 DUSP27Q5VZP5 1158 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms