RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 NR2E3Q9Y5X4 410 aa7.41□□□□□ -1.22
ITGB1-209ENST00000472147 COL1A1P02452 1464 aaPredicted RBP7.41□□□□□ -1.22
ITGB1-209ENST00000472147 LAMB4A4D0S4 1761 aa7.41□□□□□ -1.22
ITGB1-209ENST00000472147 ANKRD18BA2A2Z9 1011 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 NEURL1BA8MQ27 555 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 WFS1O76024 890 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 GJB1P08034 283 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 FBXO45P0C2W1 286 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 TNNI2P48788 182 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 RBM5P52756 815 aaKnown RBP eCLIP7.4□□□□□ -1.22
ITGB1-209ENST00000472147 PTK2Q05397 1052 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 CHRNDQ07001 517 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 WDR43Q15061 677 aaKnown RBP eCLIP7.4□□□□□ -1.22
ITGB1-209ENST00000472147 TAF1CQ15572 869 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-209ENST00000472147 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-209ENST00000472147 ZNF804AQ7Z570 1209 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 CCDC146Q8IYE0 955 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 CERS5Q8N5B7 392 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 C8orf58Q8NAV2 365 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 BRI3BPQ8WY22 251 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 HOOK2Q96ED9 719 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 VEZTQ9HBM0 779 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 CSADQ9Y600 493 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 PTCH2Q9Y6C5 1203 aa7.4□□□□□ -1.22
ITGB1-209ENST00000472147 LRRC37AA6NMS7 1700 aa7.4□□□□□ -1.23
ITGB1-209ENST00000472147 TAF1P21675 1872 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 FAM205AQ6ZU69 1335 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 CCL15-CCL14A0A0B4J2E2 113 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 ZBBXA8MT70 800 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 GJA8P48165 433 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 LACTBP83111 547 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-209ENST00000472147 HDLBPQ00341 1268 aaKnown RBP7.39□□□□□ -1.23
ITGB1-209ENST00000472147 CAP1Q01518 475 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 NR1H3Q13133 447 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 IFIT5Q13325 482 aaKnown RBP7.39□□□□□ -1.23
ITGB1-209ENST00000472147 SNAPC2Q13487 334 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 GCKRQ14397 625 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 CCL15Q16663 113 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 C17orf99Q6UX52 265 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 BPHLQ86WA6 291 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-209ENST00000472147 ERO1BQ86YB8 467 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 DZIP1LQ8IYY4 767 aaKnown RBP7.39□□□□□ -1.23
ITGB1-209ENST00000472147 TRIM47Q96LD4 638 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 TEPSINQ96N21 525 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 STK31Q9BXU1 1019 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 PRO3102Q9H379 93 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 ELP3Q9H9T3 547 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 ZNF70Q9UC06 446 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-209ENST00000472147 LAMA3Q16787 3333 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 SCN9AQ15858 1988 aa7.39□□□□□ -1.23
ITGB1-209ENST00000472147 CLRN2A0PK11 232 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 F8W031 263 aaPredicted RBP7.38□□□□□ -1.23
ITGB1-209ENST00000472147 SIAH2O43255 324 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 TRAK2O60296 914 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 KLRK1P26718 216 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 INSM1Q01101 510 aaPredicted RBP7.38□□□□□ -1.23
ITGB1-209ENST00000472147 CWF19L2Q2TBE0 894 aaKnown RBP7.38□□□□□ -1.23
ITGB1-209ENST00000472147 ZNF697Q5TEC3 545 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 FKBP1CQ5VVH2 108 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 UBE3BQ7Z3V4 1068 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 UBE2Q1Q7Z7E8 422 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 FAM43AQ8N2R8 423 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 LINS1Q8NG48 757 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.38□□□□□ -1.23
ITGB1-209ENST00000472147 TDRD7Q8NHU6 1098 aaKnown RBP7.38□□□□□ -1.23
ITGB1-209ENST00000472147 SH3TC2Q8TF17 1288 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 ARHGAP9Q9BRR9 750 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 C1QTNF2Q9BXJ5 285 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 MYH16Q9H6N6 1097 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 PKD2L1Q9P0L9 805 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 SRRDQ9UH36 339 aa7.38□□□□□ -1.23
ITGB1-209ENST00000472147 IRS2Q9Y4H2 1338 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 WNT7AO00755 349 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 APAF1O14727 1248 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 GDF9O60383 454 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 TAF5LO75529 589 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 HIBADHP31937 336 aaKnown RBP7.37□□□□□ -1.23
ITGB1-209ENST00000472147 GRK4P32298 578 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 PSMC4P43686 418 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 CASP7P55210 303 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 PPATQ06203 517 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 VGLL4Q14135 290 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 UBE4AQ14139 1066 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 LDHAL6AQ6ZMR3 332 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 FAM83AQ86UY5 434 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 TDRD3Q9H7E2 651 aaKnown RBP7.37□□□□□ -1.23
ITGB1-209ENST00000472147 TTF2Q9UNY4 1162 aaKnown RBP7.37□□□□□ -1.23
ITGB1-209ENST00000472147 PCDHAC2Q9Y5I4 1007 aa7.37□□□□□ -1.23
ITGB1-209ENST00000472147 LAMB2P55268 1798 aa7.36□□□□□ -1.23
ITGB1-209ENST00000472147 MYBBP1AQ9BQG0 1328 aaKnown RBP7.36□□□□□ -1.23
ITGB1-209ENST00000472147 FAM187AA6NFU0 413 aa7.36□□□□□ -1.23
ITGB1-209ENST00000472147 BTBD19C9JJ37 291 aa7.36□□□□□ -1.23
ITGB1-209ENST00000472147 WIPF1O43516 503 aa7.36□□□□□ -1.23
ITGB1-209ENST00000472147 SGPL1O95470 568 aa7.36□□□□□ -1.23
ITGB1-209ENST00000472147 VARSP26640 1264 aaKnown RBP7.36□□□□□ -1.23
ITGB1-209ENST00000472147 UBXN2AP68543 259 aa7.36□□□□□ -1.23
ITGB1-209ENST00000472147 PRR20EP86478 221 aa7.36□□□□□ -1.23
ITGB1-209ENST00000472147 PRR20CP86479 221 aa7.36□□□□□ -1.23
ITGB1-209ENST00000472147 PRR20DP86480 221 aa7.36□□□□□ -1.23
ITGB1-209ENST00000472147 PRR20BP86481 221 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms