RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 TTF1Q15361 905 aaPredicted RBP27.41■■□□□ 1.98
C9orf3-213ENST00000471978 SHROOM1Q2M3G4 852 aaPredicted RBP27.41■■□□□ 1.98
C9orf3-213ENST00000471978 SLAIN1Q8ND83 568 aa27.41■■□□□ 1.98
C9orf3-213ENST00000471978 GINM1Q9NU53 330 aa27.41■■□□□ 1.98
C9orf3-213ENST00000471978 GCLCP48506 637 aaPredicted RBP27.4■■□□□ 1.98
C9orf3-213ENST00000471978 FLT3LGP49771 235 aa27.4■■□□□ 1.98
C9orf3-213ENST00000471978 FAM110CQ1W6H9 321 aa27.4■■□□□ 1.98
C9orf3-213ENST00000471978 ASCC2Q9H1I8 757 aaPredicted RBP27.4■■□□□ 1.98
C9orf3-213ENST00000471978 TMOD4Q9NZQ9 345 aa27.4■■□□□ 1.98
C9orf3-213ENST00000471978 ZBTB21Q9ULJ3 1066 aa27.4■■□□□ 1.98
C9orf3-213ENST00000471978 RAB11FIP3O75154 756 aa27.39■■□□□ 1.98
C9orf3-213ENST00000471978 UBXN2AP68543 259 aa27.39■■□□□ 1.98
C9orf3-213ENST00000471978 CCL5P13501 91 aa27.38■■□□□ 1.97
C9orf3-213ENST00000471978 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.38■■□□□ 1.97
C9orf3-213ENST00000471978 COA7Q96BR5 231 aa27.38■■□□□ 1.97
C9orf3-213ENST00000471978 DNAJC2Q99543 621 aaKnown RBP27.38■■□□□ 1.97
C9orf3-213ENST00000471978 RIOK1Q9BRS2 568 aaKnown RBP27.38■■□□□ 1.97
C9orf3-213ENST00000471978 C19orf81C9J6K1 198 aa27.37■■□□□ 1.97
C9orf3-213ENST00000471978 USP17L10C9JJH3 530 aa27.37■■□□□ 1.97
C9orf3-213ENST00000471978 ADCY3O60266 1144 aa27.37■■□□□ 1.97
C9orf3-213ENST00000471978 SLC9C2Q5TAH2 1124 aa27.37■■□□□ 1.97
C9orf3-213ENST00000471978 MYH1P12882 1939 aa27.37■■□□□ 1.97
C9orf3-213ENST00000471978 MAGEB6P1A0A0J9YX57 407 aa27.36■■□□□ 1.97
C9orf3-213ENST00000471978 GOLIM4O00461 696 aa27.36■■□□□ 1.97
C9orf3-213ENST00000471978 PDE6AP16499 860 aa27.36■■□□□ 1.97
C9orf3-213ENST00000471978 TTC6Q86TZ1 520 aa27.36■■□□□ 1.97
C9orf3-213ENST00000471978 RNF208Q9H0X6 261 aa27.36■■□□□ 1.97
C9orf3-213ENST00000471978 EHD4Q9H223 541 aa27.36■■□□□ 1.97
C9orf3-213ENST00000471978 SERPINB13Q9UIV8 391 aa27.36■■□□□ 1.97
C9orf3-213ENST00000471978 GH2P01242 217 aa27.35■■□□□ 1.97
C9orf3-213ENST00000471978 ELNP15502 786 aa27.35■■□□□ 1.97
C9orf3-213ENST00000471978 IRX3P78415 501 aaPredicted RBP27.35■■□□□ 1.97
C9orf3-213ENST00000471978 IRF5Q13568 498 aa27.35■■□□□ 1.97
C9orf3-213ENST00000471978 C20orf194Q5TEA3 1177 aa27.35■■□□□ 1.97
C9orf3-213ENST00000471978 TATDN1Q6P1N9 297 aa27.35■■□□□ 1.97
C9orf3-213ENST00000471978 NKX2-3Q8TAU0 364 aa27.35■■□□□ 1.97
C9orf3-213ENST00000471978 SHISA4Q96DD7 197 aa27.35■■□□□ 1.97
C9orf3-213ENST00000471978 GJB1P08034 283 aa27.34■■□□□ 1.97
C9orf3-213ENST00000471978 HOXA7P31268 230 aaPredicted RBP27.34■■□□□ 1.97
C9orf3-213ENST00000471978 PDE3AQ14432 1141 aa27.34■■□□□ 1.97
C9orf3-213ENST00000471978 PXYLP1Q8TE99 480 aa27.34■■□□□ 1.97
C9orf3-213ENST00000471978 TAOK2Q9UL54 1235 aa27.34■■□□□ 1.97
C9orf3-213ENST00000471978 GJA8P48165 433 aa27.33■■□□□ 1.97
C9orf3-213ENST00000471978 P2RX7Q99572 595 aaKnown RBP27.33■■□□□ 1.97
C9orf3-213ENST00000471978 ZNF532Q9HCE3 1301 aa27.33■■□□□ 1.97
C9orf3-213ENST00000471978 INHAP05111 366 aa27.32■■□□□ 1.96
C9orf3-213ENST00000471978 GCC1Q96CN9 775 aa27.32■■□□□ 1.96
C9orf3-213ENST00000471978 EDC3Q96F86 508 aaKnown RBP27.32■■□□□ 1.96
C9orf3-213ENST00000471978 CRNKL1Q9BZJ0 848 aaKnown RBP27.32■■□□□ 1.96
C9orf3-213ENST00000471978 UNC93B1Q9H1C4 597 aa27.32■■□□□ 1.96
C9orf3-213ENST00000471978 POLR3DP05423 398 aaPredicted RBP27.31■■□□□ 1.96
C9orf3-213ENST00000471978 PLCD1P51178 756 aa27.31■■□□□ 1.96
C9orf3-213ENST00000471978 CERKLQ49MI3 558 aaPredicted RBP27.31■■□□□ 1.96
C9orf3-213ENST00000471978 USP17L2Q6R6M4 530 aa27.31■■□□□ 1.96
C9orf3-213ENST00000471978 MORF4L1Q9UBU8 362 aa27.31■■□□□ 1.96
C9orf3-213ENST00000471978 TCRBV5S4A2TA0A5A2 114 aa27.3■■□□□ 1.96
C9orf3-213ENST00000471978 BOLA2Q9H3K6 86 aa27.3■■□□□ 1.96
C9orf3-213ENST00000471978 EMILIN3Q9NT22 766 aa27.3■■□□□ 1.96
C9orf3-213ENST00000471978 PAG1Q9NWQ8 432 aa27.3■■□□□ 1.96
C9orf3-213ENST00000471978 ATP5JP18859 108 aa27.29■■□□□ 1.96
C9orf3-213ENST00000471978 HERVK_113P62684 666 aa27.29■■□□□ 1.96
C9orf3-213ENST00000471978 RAB3GAP1Q15042 981 aa27.29■■□□□ 1.96
C9orf3-213ENST00000471978 ABCB5Q2M3G0 1257 aa27.29■■□□□ 1.96
C9orf3-213ENST00000471978 U2AF1L4Q8WU68 220 aaKnown RBP27.29■■□□□ 1.96
C9orf3-213ENST00000471978 DOCK3Q8IZD9 2030 aa27.28■■□□□ 1.96
C9orf3-213ENST00000471978 SHMT1P34896 483 aa27.28■■□□□ 1.96
C9orf3-213ENST00000471978 FEZ1Q99689 392 aa27.28■■□□□ 1.96
C9orf3-213ENST00000471978 LRRCC1Q9C099 1032 aa27.28■■□□□ 1.96
C9orf3-213ENST00000471978 CABP5Q9NP86 173 aa27.28■■□□□ 1.96
C9orf3-213ENST00000471978 MCM9Q9NXL9 1143 aa27.28■■□□□ 1.96
C9orf3-213ENST00000471978 PEX10O60683 326 aa27.27■■□□□ 1.96
C9orf3-213ENST00000471978 ZYXQ15942 572 aaKnown RBP27.27■■□□□ 1.96
C9orf3-213ENST00000471978 LCORLQ8N3X6 602 aa27.27■■□□□ 1.96
C9orf3-213ENST00000471978 GPRC5AQ8NFJ5 357 aa27.27■■□□□ 1.96
C9orf3-213ENST00000471978 SDR42E1Q8WUS8 393 aa27.27■■□□□ 1.96
C9orf3-213ENST00000471978 TXNRD2Q9NNW7 524 aa27.27■■□□□ 1.96
C9orf3-213ENST00000471978 GJD2Q9UKL4 321 aa27.27■■□□□ 1.96
C9orf3-213ENST00000471978 DDX60LQ5H9U9 1706 aaKnown RBP27.27■■□□□ 1.96
C9orf3-213ENST00000471978 NAV1Q8NEY1 1877 aa27.26■■□□□ 1.95
C9orf3-213ENST00000471978 SGPL1O95470 568 aa27.26■■□□□ 1.95
C9orf3-213ENST00000471978 HAUS7Q99871 368 aa27.26■■□□□ 1.95
C9orf3-213ENST00000471978 USP14P54578 494 aa27.25■■□□□ 1.95
C9orf3-213ENST00000471978 GABPAQ06546 454 aa27.25■■□□□ 1.95
C9orf3-213ENST00000471978 C12orf42Q96LP6 360 aa27.25■■□□□ 1.95
C9orf3-213ENST00000471978 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.25■■□□□ 1.95
C9orf3-213ENST00000471978 ARMT1Q9H993 441 aa27.25■■□□□ 1.95
C9orf3-213ENST00000471978 DCP1AQ9NPI6 582 aaPredicted RBP27.25■■□□□ 1.95
C9orf3-213ENST00000471978 RBPJLQ9UBG7 517 aa27.25■■□□□ 1.95
C9orf3-213ENST00000471978 CEP290O15078 2479 aa27.24■■□□□ 1.95
C9orf3-213ENST00000471978 SMARCA5O60264 1052 aaPredicted RBP27.24■■□□□ 1.95
C9orf3-213ENST00000471978 ADD2P35612 726 aa27.24■■□□□ 1.95
C9orf3-213ENST00000471978 EVX2Q03828 476 aa27.24■■□□□ 1.95
C9orf3-213ENST00000471978 SLFNL1Q499Z3 407 aa27.24■■□□□ 1.95
C9orf3-213ENST00000471978 UBE2Q1Q7Z7E8 422 aa27.24■■□□□ 1.95
C9orf3-213ENST00000471978 ACER1Q8TDN7 264 aa27.24■■□□□ 1.95
C9orf3-213ENST00000471978 GTF3C2Q8WUA4 911 aaPredicted RBP27.24■■□□□ 1.95
C9orf3-213ENST00000471978 KIAA1683Q9H0B3 1180 aa27.24■■□□□ 1.95
C9orf3-213ENST00000471978 DEFB118Q96PH6 123 aa27.23■■□□□ 1.95
C9orf3-213ENST00000471978 PAGR1Q9BTK6 254 aa27.23■■□□□ 1.95
C9orf3-213ENST00000471978 USP17L15C9J2P7 530 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms