RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 SAP30BPQ9UHR5 308 aaKnown RBP22.88■■□□□ 1.25
COMMD1-207ENST00000471704 PNMA3Q9UL41 463 aa22.88■■□□□ 1.25
COMMD1-207ENST00000471704 TCRBV5S4A2TA0A5A2 114 aa22.87■■□□□ 1.25
COMMD1-207ENST00000471704 ASNSP08243 561 aa22.87■■□□□ 1.25
COMMD1-207ENST00000471704 FLT3LGP49771 235 aa22.87■■□□□ 1.25
COMMD1-207ENST00000471704 FAM110CQ1W6H9 321 aa22.87■■□□□ 1.25
COMMD1-207ENST00000471704 SHROOM1Q2M3G4 852 aaPredicted RBP22.87■■□□□ 1.25
COMMD1-207ENST00000471704 TMED8Q6PL24 325 aaPredicted RBP22.87■■□□□ 1.25
COMMD1-207ENST00000471704 ANKRD13CQ8N6S4 541 aa22.87■■□□□ 1.25
COMMD1-207ENST00000471704 SLAIN1Q8ND83 568 aa22.87■■□□□ 1.25
COMMD1-207ENST00000471704 YTHDC1Q96MU7 727 aaKnown RBP22.87■■□□□ 1.25
COMMD1-207ENST00000471704 LRRCC1Q9C099 1032 aa22.87■■□□□ 1.25
COMMD1-207ENST00000471704 AS3MTQ9HBK9 375 aa22.87■■□□□ 1.25
COMMD1-207ENST00000471704 GINM1Q9NU53 330 aa22.87■■□□□ 1.25
COMMD1-207ENST00000471704 CCL5P13501 91 aa22.86■■□□□ 1.25
COMMD1-207ENST00000471704 PDE6AP16499 860 aa22.86■■□□□ 1.25
COMMD1-207ENST00000471704 ATP5JP18859 108 aa22.86■■□□□ 1.25
COMMD1-207ENST00000471704 GCLCP48506 637 aaPredicted RBP22.86■■□□□ 1.25
COMMD1-207ENST00000471704 IRF5Q13568 498 aa22.86■■□□□ 1.25
COMMD1-207ENST00000471704 TTF1Q15361 905 aaPredicted RBP22.86■■□□□ 1.25
COMMD1-207ENST00000471704 CERS3Q8IU89 383 aa22.86■■□□□ 1.25
COMMD1-207ENST00000471704 BOLA2Q9H3K6 86 aa22.86■■□□□ 1.25
COMMD1-207ENST00000471704 PCDHB15Q9Y5E8 787 aa22.86■■□□□ 1.25
COMMD1-207ENST00000471704 TNPO2O14787 897 aaKnown RBP22.85■■□□□ 1.25
COMMD1-207ENST00000471704 GJB1P08034 283 aa22.85■■□□□ 1.25
COMMD1-207ENST00000471704 BACE1P56817 501 aa22.85■■□□□ 1.25
COMMD1-207ENST00000471704 PABPC4Q13310 644 aaKnown RBP eCLIP22.85■■□□□ 1.257e-6■■□□□ 14.2
COMMD1-207ENST00000471704 SLFNL1Q499Z3 407 aa22.85■■□□□ 1.25
COMMD1-207ENST00000471704 SLC9C2Q5TAH2 1124 aa22.85■■□□□ 1.25
COMMD1-207ENST00000471704 CRACR2BQ8N4Y2 399 aaPredicted RBP22.85■■□□□ 1.25
COMMD1-207ENST00000471704 GCC1Q96CN9 775 aa22.85■■□□□ 1.25
COMMD1-207ENST00000471704 ASCC2Q9H1I8 757 aaPredicted RBP22.85■■□□□ 1.25
COMMD1-207ENST00000471704 DCTPP1Q9H773 170 aa22.85■■□□□ 1.25
COMMD1-207ENST00000471704 ZNF532Q9HCE3 1301 aa22.84■■□□□ 1.25
COMMD1-207ENST00000471704 BAZ2AQ9UIF9 1905 aaKnown RBP22.84■■□□□ 1.25
COMMD1-207ENST00000471704 ADCY3O60266 1144 aa22.84■■□□□ 1.25
COMMD1-207ENST00000471704 CHGBP05060 677 aa22.84■■□□□ 1.25
COMMD1-207ENST00000471704 GJA8P48165 433 aa22.84■■□□□ 1.25
COMMD1-207ENST00000471704 PXYLP1Q8TE99 480 aa22.84■■□□□ 1.25
COMMD1-207ENST00000471704 PAG1Q9NWQ8 432 aa22.84■■□□□ 1.25
COMMD1-207ENST00000471704 HOXA7P31268 230 aaPredicted RBP22.83■■□□□ 1.25
COMMD1-207ENST00000471704 UBXN2AP68543 259 aa22.83■■□□□ 1.25
COMMD1-207ENST00000471704 MTMR2Q13614 643 aa22.83■■□□□ 1.25
COMMD1-207ENST00000471704 UBE2Q1Q7Z7E8 422 aa22.83■■□□□ 1.25
COMMD1-207ENST00000471704 NKX2-3Q8TAU0 364 aa22.83■■□□□ 1.25
COMMD1-207ENST00000471704 HAUS7Q99871 368 aa22.83■■□□□ 1.25
COMMD1-207ENST00000471704 RNF208Q9H0X6 261 aa22.83■■□□□ 1.25
COMMD1-207ENST00000471704 BIN2Q9UBW5 565 aaPredicted RBP22.83■■□□□ 1.25
COMMD1-207ENST00000471704 ZBTB21Q9ULJ3 1066 aa22.83■■□□□ 1.25
COMMD1-207ENST00000471704 MAGEB6P1A0A0J9YX57 407 aa22.82■■□□□ 1.24
COMMD1-207ENST00000471704 C19orf81C9J6K1 198 aa22.82■■□□□ 1.24
COMMD1-207ENST00000471704 HLA-DOAP06340 250 aa22.82■■□□□ 1.24
COMMD1-207ENST00000471704 USP5P45974 858 aa22.82■■□□□ 1.24
COMMD1-207ENST00000471704 TATDN1Q6P1N9 297 aa22.82■■□□□ 1.24
COMMD1-207ENST00000471704 MYH8P13535 1937 aa22.82■■□□□ 1.24
COMMD1-207ENST00000471704 GDF11O95390 407 aa22.81■■□□□ 1.24
COMMD1-207ENST00000471704 ELNP15502 786 aa22.81■■□□□ 1.24
COMMD1-207ENST00000471704 EVX2Q03828 476 aa22.81■■□□□ 1.24
COMMD1-207ENST00000471704 LCORLQ8N3X6 602 aa22.81■■□□□ 1.24
COMMD1-207ENST00000471704 COA7Q96BR5 231 aa22.81■■□□□ 1.24
COMMD1-207ENST00000471704 TRIM34Q9BYJ4 488 aa22.81■■□□□ 1.24
COMMD1-207ENST00000471704 UNC93B1Q9H1C4 597 aa22.81■■□□□ 1.24
COMMD1-207ENST00000471704 EHD4Q9H223 541 aa22.81■■□□□ 1.24
COMMD1-207ENST00000471704 MORF4L1Q9UBU8 362 aa22.81■■□□□ 1.24
COMMD1-207ENST00000471704 USP17L10C9JJH3 530 aa22.8■■□□□ 1.24
COMMD1-207ENST00000471704 ADD2P35612 726 aa22.8■■□□□ 1.24
COMMD1-207ENST00000471704 CRBNQ96SW2 442 aa22.8■■□□□ 1.24
COMMD1-207ENST00000471704 TMOD4Q9NZQ9 345 aa22.8■■□□□ 1.24
COMMD1-207ENST00000471704 GJD2Q9UKL4 321 aa22.8■■□□□ 1.24
COMMD1-207ENST00000471704 INHAP05111 366 aa22.79■■□□□ 1.24
COMMD1-207ENST00000471704 PLCD1P51178 756 aa22.79■■□□□ 1.24
COMMD1-207ENST00000471704 P2RX7Q99572 595 aaKnown RBP22.79■■□□□ 1.24
COMMD1-207ENST00000471704 SERPINB13Q9UIV8 391 aa22.79■■□□□ 1.24
COMMD1-207ENST00000471704 PLXNB2O15031 1838 aa22.78■■□□□ 1.24
COMMD1-207ENST00000471704 HABP4Q5JVS0 413 aaKnown RBP22.78■■□□□ 1.24
COMMD1-207ENST00000471704 TSHZ3Q63HK5 1081 aa22.78■■□□□ 1.24
COMMD1-207ENST00000471704 U2AF1L4Q8WU68 220 aaKnown RBP22.78■■□□□ 1.24
COMMD1-207ENST00000471704 SDR42E1Q8WUS8 393 aa22.78■■□□□ 1.24
COMMD1-207ENST00000471704 EMILIN3Q9NT22 766 aa22.78■■□□□ 1.24
COMMD1-207ENST00000471704 SGPL1O95470 568 aa22.77■■□□□ 1.24
COMMD1-207ENST00000471704 GH2P01242 217 aa22.77■■□□□ 1.24
COMMD1-207ENST00000471704 IRX3P78415 501 aaPredicted RBP22.77■■□□□ 1.24
COMMD1-207ENST00000471704 TTC6Q86TZ1 520 aa22.77■■□□□ 1.24
COMMD1-207ENST00000471704 ARMT1Q9H993 441 aa22.77■■□□□ 1.24
COMMD1-207ENST00000471704 HERVK_113P62684 666 aa22.76■■□□□ 1.23
COMMD1-207ENST00000471704 CRNKL1Q9BZJ0 848 aaKnown RBP22.76■■□□□ 1.23
COMMD1-207ENST00000471704 TXNRD2Q9NNW7 524 aa22.76■■□□□ 1.23
COMMD1-207ENST00000471704 PAK6Q9NQU5 681 aaPredicted RBP22.76■■□□□ 1.23
COMMD1-207ENST00000471704 ECHDC1Q9NTX5 307 aa22.76■■□□□ 1.23
COMMD1-207ENST00000471704 H0YGN5 161 aa22.75■■□□□ 1.23
COMMD1-207ENST00000471704 PRKAB2O43741 272 aa22.75■■□□□ 1.23
COMMD1-207ENST00000471704 CAPN2P17655 700 aa22.75■■□□□ 1.23
COMMD1-207ENST00000471704 SHMT1P34896 483 aa22.75■■□□□ 1.23
COMMD1-207ENST00000471704 GABPAQ06546 454 aa22.75■■□□□ 1.23
COMMD1-207ENST00000471704 USP17L2Q6R6M4 530 aa22.75■■□□□ 1.23
COMMD1-207ENST00000471704 POTEEQ6S8J3 1075 aa22.75■■□□□ 1.23
COMMD1-207ENST00000471704 C12orf42Q96LP6 360 aa22.75■■□□□ 1.23
COMMD1-207ENST00000471704 DCP1AQ9NPI6 582 aaPredicted RBP22.75■■□□□ 1.23
COMMD1-207ENST00000471704 RBPJLQ9UBG7 517 aa22.75■■□□□ 1.23
COMMD1-207ENST00000471704 MBD4O95243 580 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms