RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 MFSD4AQ8N468 514 aa6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 RIN3Q8TB24 985 aa6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 XAGE3Q8WTP9 111 aa6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 GAL3ST3Q96A11 431 aa6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 FAM53CQ9NYF3 392 aa6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 PITPNM2Q9BZ72 1349 aa6.4□□□□□ -1.39
PRPF40A-207ENST00000471701 CST3P01034 146 aaPredicted RBP6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 PDIA4P13667 645 aaKnown RBP6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 CDK8P49336 464 aa6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 LIG3P49916 1009 aa6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 PDE4BQ07343 736 aa6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 PSMD2Q13200 908 aa6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 SEPT6Q14141 434 aa6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 TAF1CQ15572 869 aaPredicted RBP6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 PKN1Q16512 942 aa6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 ZNF648Q5T619 568 aaPredicted RBP6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 KSR1Q8IVT5 923 aa6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 FLAD1Q8NFF5 587 aa6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 JARID2Q92833 1246 aaPredicted RBP6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 COX4I2Q96KJ9 171 aa6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 SLC38A3Q99624 504 aa6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.39□□□□□ -1.39
PRPF40A-207ENST00000471701 PRR33A8MZF0 331 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 GFRA2O00451 464 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 PGRP06401 933 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 KCNMB1Q16558 191 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 TSNAXIP1Q2TAA8 658 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 PRAMEF13Q5VWM6 474 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 C22orf34Q6ZV56 151 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 SND1Q7KZF4 910 aaKnown RBP eCLIP6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 CDH24Q86UP0 819 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 ZSWIM9Q86XI8 627 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 CCDC120Q96HB5 630 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 KRTAP9-9Q9BYP9 154 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 KRTAP9-4Q9BYQ2 154 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 CARS2Q9HA77 564 aaKnown RBP6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 PARP2Q9UGN5 583 aa6.38□□□□□ -1.39
PRPF40A-207ENST00000471701 CNTNAP4Q9C0A0 1308 aa6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 H3BS24 57 aa6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 ZNF865P0CJ78 1059 aaPredicted RBP6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 KIR3DL1P43629 444 aa6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 SLC6A19Q695T7 634 aa6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 UBE2FQ969M7 185 aa6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 ATP13A1Q9HD20 1204 aa6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 SEMA3GQ9NS98 782 aa6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 RNF19AQ9NV58 838 aa6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 CTNND2Q9UQB3 1225 aa6.37□□□□□ -1.39
PRPF40A-207ENST00000471701 LRRC10BA6NIK2 292 aa6.36□□□□□ -1.39
PRPF40A-207ENST00000471701 DAB2P98082 770 aa6.36□□□□□ -1.39
PRPF40A-207ENST00000471701 THAP5Q7Z6K1 395 aa6.36□□□□□ -1.39
PRPF40A-207ENST00000471701 NOC4LQ9BVI4 516 aaKnown RBP6.36□□□□□ -1.39
PRPF40A-207ENST00000471701 TJP2Q9UDY2 1190 aa6.36□□□□□ -1.39
PRPF40A-207ENST00000471701 CAPN6Q9Y6Q1 641 aa6.36□□□□□ -1.39
PRPF40A-207ENST00000471701 TFE3P19532 575 aaPredicted RBP6.35□□□□□ -1.39
PRPF40A-207ENST00000471701 ETV3P41162 512 aa6.35□□□□□ -1.39
PRPF40A-207ENST00000471701 RPL6Q02878 288 aaKnown RBP6.35□□□□□ -1.39
PRPF40A-207ENST00000471701 MEI1Q5TIA1 1274 aa6.35□□□□□ -1.39
PRPF40A-207ENST00000471701 RELL1Q8IUW5 271 aa6.35□□□□□ -1.39
PRPF40A-207ENST00000471701 MCATQ8IVS2 390 aaKnown RBP6.35□□□□□ -1.39
PRPF40A-207ENST00000471701 MRPL41Q8IXM3 137 aaKnown RBP6.35□□□□□ -1.39
PRPF40A-207ENST00000471701 TMEM87BQ96K49 555 aa6.35□□□□□ -1.39
PRPF40A-207ENST00000471701 FAM84AQ96KN4 292 aa6.35□□□□□ -1.39
PRPF40A-207ENST00000471701 GDNFP39905 211 aa6.34□□□□□ -1.39
PRPF40A-207ENST00000471701 ST13P50502 369 aaKnown RBP6.34□□□□□ -1.39
PRPF40A-207ENST00000471701 ZNF124Q15973 351 aa6.34□□□□□ -1.39
PRPF40A-207ENST00000471701 MLANAQ16655 118 aa6.34□□□□□ -1.39
PRPF40A-207ENST00000471701 TMEM67Q5HYA8 995 aa6.34□□□□□ -1.39
PRPF40A-207ENST00000471701 KIRREL1Q96J84 757 aa6.34□□□□□ -1.39
PRPF40A-207ENST00000471701 CEP131Q9UPN4 1083 aa6.34□□□□□ -1.39
PRPF40A-207ENST00000471701 TLR6Q9Y2C9 796 aa6.34□□□□□ -1.39
PRPF40A-207ENST00000471701 ST14Q9Y5Y6 855 aa6.34□□□□□ -1.39
PRPF40A-207ENST00000471701 USP31Q70CQ4 1352 aa6.33□□□□□ -1.4
PRPF40A-207ENST00000471701 BPNT1O95861 308 aa6.33□□□□□ -1.4
PRPF40A-207ENST00000471701 ITGAEP38570 1179 aa6.33□□□□□ -1.4
PRPF40A-207ENST00000471701 JAG1P78504 1218 aa6.33□□□□□ -1.4
PRPF40A-207ENST00000471701 TNK2Q07912 1038 aa6.33□□□□□ -1.4
PRPF40A-207ENST00000471701 MPZL3Q6UWV2 235 aa6.33□□□□□ -1.4
PRPF40A-207ENST00000471701 CCDC84Q86UT8 332 aaPredicted RBP6.33□□□□□ -1.4
PRPF40A-207ENST00000471701 PIWIL2Q8TC59 973 aaKnown RBP6.33□□□□□ -1.4
PRPF40A-207ENST00000471701 DPH2Q9BQC3 489 aaPredicted RBP6.33□□□□□ -1.4
PRPF40A-207ENST00000471701 ADAM30Q9UKF2 790 aa6.33□□□□□ -1.4
PRPF40A-207ENST00000471701 DBX1A6NMT0 343 aa6.32□□□□□ -1.4
PRPF40A-207ENST00000471701 GLI1P08151 1106 aa6.32□□□□□ -1.4
PRPF40A-207ENST00000471701 PLCG1P19174 1290 aa6.32□□□□□ -1.4
PRPF40A-207ENST00000471701 FYB2Q5VWT5 728 aa6.32□□□□□ -1.4
PRPF40A-207ENST00000471701 TMC4Q7Z404 712 aa6.32□□□□□ -1.4
PRPF40A-207ENST00000471701 ALPK1Q96QP1 1244 aa6.32□□□□□ -1.4
PRPF40A-207ENST00000471701 MRS2Q9HD23 443 aa6.32□□□□□ -1.4
PRPF40A-207ENST00000471701 ZNF503-AS2A6NEH8 195 aa6.31□□□□□ -1.4
PRPF40A-207ENST00000471701 SORBS3O60504 671 aa6.31□□□□□ -1.4
PRPF40A-207ENST00000471701 RAC2P15153 192 aa6.31□□□□□ -1.4
PRPF40A-207ENST00000471701 YARSP54577 528 aaKnown RBP6.31□□□□□ -1.4
PRPF40A-207ENST00000471701 TMPRSS7Q7RTY8 843 aa6.31□□□□□ -1.4
PRPF40A-207ENST00000471701 TTC6Q86TZ1 520 aa6.31□□□□□ -1.4
PRPF40A-207ENST00000471701 PHC3Q8NDX5 983 aa6.31□□□□□ -1.4
PRPF40A-207ENST00000471701 ACSF2Q96CM8 615 aaPredicted RBP6.31□□□□□ -1.4
PRPF40A-207ENST00000471701 LIN37Q96GY3 246 aaPredicted RBP6.31□□□□□ -1.4
PRPF40A-207ENST00000471701 TRIT1Q9H3H1 467 aaKnown RBP6.31□□□□□ -1.4
PRPF40A-207ENST00000471701 KCNH3Q9ULD8 1083 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms