RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MAP3K10Q02779 954 aa22.67■■□□□ 1.22
PSPC1-203ENST00000471658 TATDN1Q6P1N9 297 aa22.67■■□□□ 1.22
PSPC1-203ENST00000471658 CDC37L1Q7L3B6 337 aa22.67■■□□□ 1.22
PSPC1-203ENST00000471658 LDHDQ86WU2 507 aa22.67■■□□□ 1.22
PSPC1-203ENST00000471658 ESR2Q92731 530 aa22.67■■□□□ 1.22
PSPC1-203ENST00000471658 GPBP1L1Q9HC44 474 aaPredicted RBP22.67■■□□□ 1.22
PSPC1-203ENST00000471658 PDRG1Q9NUG6 133 aa22.67■■□□□ 1.22
PSPC1-203ENST00000471658 HMGB1P09429 215 aaKnown RBP22.66■■□□□ 1.22
PSPC1-203ENST00000471658 MCM5P33992 734 aa22.66■■□□□ 1.22
PSPC1-203ENST00000471658 JAG1P78504 1218 aa22.66■■□□□ 1.22
PSPC1-203ENST00000471658 CDCA5Q96FF9 252 aa22.66■■□□□ 1.22
PSPC1-203ENST00000471658 LARP6Q9BRS8 491 aaKnown RBP22.66■■□□□ 1.22
PSPC1-203ENST00000471658 ZNF287Q9HBT7 754 aa22.66■■□□□ 1.22
PSPC1-203ENST00000471658 SSC5DA1L4H1 1573 aa22.66■■□□□ 1.22
PSPC1-203ENST00000471658 TSPY2A6NKD2 308 aa22.65■■□□□ 1.22
PSPC1-203ENST00000471658 TRAF5O00463 557 aa22.65■■□□□ 1.22
PSPC1-203ENST00000471658 NMT2O60551 498 aa22.65■■□□□ 1.22
PSPC1-203ENST00000471658 CD2BP2O95400 341 aaKnown RBP22.65■■□□□ 1.22
PSPC1-203ENST00000471658 PRKG1Q13976 671 aa22.65■■□□□ 1.22
PSPC1-203ENST00000471658 TTC14Q96N46 770 aa22.65■■□□□ 1.22
PSPC1-203ENST00000471658 GDF11O95390 407 aa22.64■■□□□ 1.22
PSPC1-203ENST00000471658 CERKLQ49MI3 558 aaPredicted RBP22.64■■□□□ 1.22
PSPC1-203ENST00000471658 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.64■■□□□ 1.22
PSPC1-203ENST00000471658 PHF20L1A8MW92 1017 aa22.64■■□□□ 1.21
PSPC1-203ENST00000471658 TSPY3P0CV98 308 aa22.64■■□□□ 1.21
PSPC1-203ENST00000471658 TSPY8P0CW00 308 aa22.64■■□□□ 1.21
PSPC1-203ENST00000471658 SUPT20HL1Q3ZLR7 823 aa22.64■■□□□ 1.21
PSPC1-203ENST00000471658 Q6ZUG5 572 aa22.64■■□□□ 1.21
PSPC1-203ENST00000471658 SENP2Q9HC62 589 aa22.63■■□□□ 1.21
PSPC1-203ENST00000471658 IL17RBQ9NRM6 502 aa22.63■■□□□ 1.21
PSPC1-203ENST00000471658 MPHOSPH10O00566 681 aaKnown RBP22.62■■□□□ 1.21
PSPC1-203ENST00000471658 KIF3CO14782 793 aa22.62■■□□□ 1.21
PSPC1-203ENST00000471658 AK2P54819 239 aa22.62■■□□□ 1.21
PSPC1-203ENST00000471658 NOL8Q76FK4 1167 aaKnown RBP22.62■■□□□ 1.21
PSPC1-203ENST00000471658 NEDD1Q8NHV4 660 aa22.62■■□□□ 1.21
PSPC1-203ENST00000471658 IGDCC4Q8TDY8 1250 aa22.62■■□□□ 1.21
PSPC1-203ENST00000471658 IFIT3O14879 490 aaKnown RBP22.61■■□□□ 1.21
PSPC1-203ENST00000471658 YY1P25490 414 aa22.61■■□□□ 1.21
PSPC1-203ENST00000471658 TOB2Q14106 344 aaPredicted RBP22.61■■□□□ 1.21
PSPC1-203ENST00000471658 DCAF15Q66K64 600 aa22.61■■□□□ 1.21
PSPC1-203ENST00000471658 CLEC10AQ8IUN9 316 aa22.61■■□□□ 1.21
PSPC1-203ENST00000471658 ZNF341Q9BYN7 854 aa22.61■■□□□ 1.21
PSPC1-203ENST00000471658 USP2O75604 605 aaPredicted RBP22.6■■□□□ 1.21
PSPC1-203ENST00000471658 INPP5BP32019 993 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 GUCY1A2P33402 732 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 HOOK2Q96ED9 719 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 CCDC17Q96LX7 622 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 ZSCAN10Q96SZ4 725 aaPredicted RBP22.6■■□□□ 1.21
PSPC1-203ENST00000471658 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.6■■□□□ 1.21
PSPC1-203ENST00000471658 TAOK2Q9UL54 1235 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 TNKSO95271 1327 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 SH2B2O14492 632 aaPredicted RBP22.6■■□□□ 1.21
PSPC1-203ENST00000471658 GH2P01242 217 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 SEC23AQ15436 765 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 ABCB5Q2M3G0 1257 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 TMEM67Q5HYA8 995 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 CHADLQ6NUI6 762 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 BRF1Q92994 677 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 UBAC1Q9BSL1 405 aa22.6■■□□□ 1.21
PSPC1-203ENST00000471658 WDR19Q8NEZ3 1342 aa22.59■■□□□ 1.21
PSPC1-203ENST00000471658 CAP2P40123 477 aa22.59■■□□□ 1.21
PSPC1-203ENST00000471658 FGD1P98174 961 aa22.59■■□□□ 1.21
PSPC1-203ENST00000471658 MOB2Q70IA6 237 aa22.59■■□□□ 1.21
PSPC1-203ENST00000471658 IQCA1Q86XH1 822 aa22.59■■□□□ 1.21
PSPC1-203ENST00000471658 ENAHQ8N8S7 591 aaPredicted RBP22.59■■□□□ 1.21
PSPC1-203ENST00000471658 ALDH8A1Q9H2A2 487 aaPredicted RBP22.59■■□□□ 1.21
PSPC1-203ENST00000471658 ZNF112Q9UJU3 913 aa22.59■■□□□ 1.21
PSPC1-203ENST00000471658 IGKV6D-41A0A0C4DH26 115 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 ST18O60284 1047 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 APOBRQ0VD83 1088 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 SEPT2Q15019 361 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 ZKSCAN4Q969J2 545 aaPredicted RBP22.58■■□□□ 1.21
PSPC1-203ENST00000471658 KLRG1Q96E93 195 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 CEP95Q96GE4 821 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 TMEM87BQ96K49 555 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 AGXT2Q9BYV1 514 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 ZNF408Q9H9D4 720 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 LY9Q9HBG7 655 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 TCP11L1Q9NUJ3 509 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 MYH8P13535 1937 aa22.58■■□□□ 1.21
PSPC1-203ENST00000471658 ITGBL1O95965 494 aaPredicted RBP22.57■■□□□ 1.2
PSPC1-203ENST00000471658 RCSD1Q6JBY9 416 aa22.57■■□□□ 1.2
PSPC1-203ENST00000471658 WRNIP1Q96S55 665 aa22.57■■□□□ 1.2
PSPC1-203ENST00000471658 WTAPQ15007 396 aa22.57■■□□□ 1.2
PSPC1-203ENST00000471658 RAB3GAP1Q15042 981 aa22.57■■□□□ 1.2
PSPC1-203ENST00000471658 CCDC84Q86UT8 332 aaPredicted RBP22.57■■□□□ 1.2
PSPC1-203ENST00000471658 CABP5Q9NP86 173 aa22.57■■□□□ 1.2
PSPC1-203ENST00000471658 ZBTB21Q9ULJ3 1066 aa22.57■■□□□ 1.2
PSPC1-203ENST00000471658 ANGEL1Q9UNK9 670 aaKnown RBP22.57■■□□□ 1.2
PSPC1-203ENST00000471658 PLIN4Q96Q06 1357 aa22.56■■□□□ 1.2
PSPC1-203ENST00000471658 NF2P35240 595 aa22.56■■□□□ 1.2
PSPC1-203ENST00000471658 NT5C2P49902 561 aa22.56■■□□□ 1.2
PSPC1-203ENST00000471658 SART3Q15020 963 aaKnown RBP22.56■■□□□ 1.2
PSPC1-203ENST00000471658 TMEM179Q6ZVK1 233 aa22.56■■□□□ 1.2
PSPC1-203ENST00000471658 ZNF784Q8NCA9 323 aaPredicted RBP22.56■■□□□ 1.2
PSPC1-203ENST00000471658 MTMR4Q9NYA4 1195 aa22.56■■□□□ 1.2
PSPC1-203ENST00000471658 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.56■■□□□ 1.2
PSPC1-203ENST00000471658 BRPF3Q9ULD4 1205 aa22.56■■□□□ 1.2
PSPC1-203ENST00000471658 TPCN1Q9ULQ1 816 aa22.56■■□□□ 1.2
PSPC1-203ENST00000471658 ERICH2A1L162 156 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms