RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 SPTLC3Q9NUV7 552 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 RBM28Q9NW13 759 aaKnown RBP21.48■■□□□ 1.03
COL20A1-205ENST00000471582 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.48■■□□□ 1.03
COL20A1-205ENST00000471582 ARPP21Q9UBL0 812 aaPredicted RBP21.48■■□□□ 1.03
COL20A1-205ENST00000471582 MYH2Q9UKX2 1941 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 USP17L12C9JPN9 530 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 USP17L21D6R901 530 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 UBE2Q2LH0YL09 131 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 PRDX5P30044 214 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 CRY2Q49AN0 593 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 CATIPQ7Z7H3 387 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 MPNDQ8N594 471 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 ANKIB1Q9P2G1 1089 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 BECN2A8MW95 431 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 POLRMTO00411 1230 aaKnown RBP21.47■■□□□ 1.03
COL20A1-205ENST00000471582 DDAH1O94760 285 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 SLC3A2P08195 630 aaKnown RBP21.47■■□□□ 1.03
COL20A1-205ENST00000471582 MARCKSP29966 332 aaPredicted RBP21.47■■□□□ 1.03
COL20A1-205ENST00000471582 DDR1Q08345 913 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 ZRSR1Q15695 479 aaKnown RBP21.47■■□□□ 1.03
COL20A1-205ENST00000471582 RILPL1Q5EBL4 403 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 IFIT1BQ5T764 474 aaKnown RBP21.47■■□□□ 1.03
COL20A1-205ENST00000471582 RESP18Q5W5W9 173 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 DHX40Q8IX18 779 aaKnown RBP21.47■■□□□ 1.03
COL20A1-205ENST00000471582 SPC24Q8NBT2 197 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 MRFAP1L1Q96HT8 127 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 KCNF1Q9H3M0 494 aa21.47■■□□□ 1.03
COL20A1-205ENST00000471582 CYP2D7A0A087X1C5 515 aa21.46■■□□□ 1.03
COL20A1-205ENST00000471582 SYKP43405 635 aa21.46■■□□□ 1.03
COL20A1-205ENST00000471582 CHAF1AQ13111 956 aaPredicted RBP21.46■■□□□ 1.03
COL20A1-205ENST00000471582 NOLC1Q14978 699 aaKnown RBP eCLIP21.46■■□□□ 1.03
COL20A1-205ENST00000471582 C15orf52Q6ZUT6 534 aaKnown RBP21.46■■□□□ 1.03
COL20A1-205ENST00000471582 WDR66Q8TBY9 1149 aa21.46■■□□□ 1.03
COL20A1-205ENST00000471582 RBM17Q96I25 401 aaKnown RBP21.46■■□□□ 1.03
COL20A1-205ENST00000471582 AATFQ9NY61 560 aaKnown RBP eCLIP21.46■■□□□ 1.03
COL20A1-205ENST00000471582 XDHP47989 1333 aa21.46■■□□□ 1.03
COL20A1-205ENST00000471582 BTBD18B2RXH4 712 aa21.45■■□□□ 1.02
COL20A1-205ENST00000471582 SMIM22K7EJ46 135 aa21.45■■□□□ 1.02
COL20A1-205ENST00000471582 EN1Q05925 392 aaPredicted RBP21.45■■□□□ 1.02
COL20A1-205ENST00000471582 EZH2Q15910 746 aaKnown RBP21.45■■□□□ 1.02
COL20A1-205ENST00000471582 SHC4Q6S5L8 630 aa21.45■■□□□ 1.02
COL20A1-205ENST00000471582 TXNRD3Q86VQ6 643 aa21.45■■□□□ 1.02
COL20A1-205ENST00000471582 MYH6P13533 1939 aa21.45■■□□□ 1.02
COL20A1-205ENST00000471582 XBP1P17861 261 aa21.45■■□□□ 1.02
COL20A1-205ENST00000471582 KIAA1524Q8TCG1 905 aa21.45■■□□□ 1.02
COL20A1-205ENST00000471582 AKAP17AQ02040 695 aaKnown RBP21.44■■□□□ 1.02
COL20A1-205ENST00000471582 FUT2Q10981 343 aa21.44■■□□□ 1.02
COL20A1-205ENST00000471582 TROAPQ12815 778 aa21.44■■□□□ 1.02
COL20A1-205ENST00000471582 DZIP1Q86YF9 867 aaKnown RBP21.44■■□□□ 1.02
COL20A1-205ENST00000471582 KRI1Q8N9T8 703 aaKnown RBP21.44■■□□□ 1.02
COL20A1-205ENST00000471582 KCNJ14Q9UNX9 436 aa21.44■■□□□ 1.02
COL20A1-205ENST00000471582 MORC2Q9Y6X9 1032 aaPredicted RBP21.44■■□□□ 1.02
COL20A1-205ENST00000471582 PRPF3O43395 683 aaKnown RBP21.43■■□□□ 1.02
COL20A1-205ENST00000471582 ELOA2Q8IYF1 753 aaPredicted RBP21.43■■□□□ 1.02
COL20A1-205ENST00000471582 TOB1P50616 345 aaPredicted RBP21.43■■□□□ 1.02
COL20A1-205ENST00000471582 NLRP12P59046 1061 aa21.43■■□□□ 1.02
COL20A1-205ENST00000471582 SF3B2Q13435 895 aaKnown RBP21.43■■□□□ 1.02
COL20A1-205ENST00000471582 DRC7Q8IY82 874 aa21.43■■□□□ 1.02
COL20A1-205ENST00000471582 CLIP2Q9UDT6 1046 aa21.43■■□□□ 1.02
COL20A1-205ENST00000471582 NRXN2Q9P2S2 1712 aa21.42■■□□□ 1.02
COL20A1-205ENST00000471582 PRDM1O75626 825 aa21.42■■□□□ 1.02
COL20A1-205ENST00000471582 PTGS1P23219 599 aa21.42■■□□□ 1.02
COL20A1-205ENST00000471582 GSTO1P78417 241 aa21.42■■□□□ 1.02
COL20A1-205ENST00000471582 PDE4BQ07343 736 aa21.42■■□□□ 1.02
COL20A1-205ENST00000471582 ZNF804AQ7Z570 1209 aa21.42■■□□□ 1.02
COL20A1-205ENST00000471582 CMTR1Q8N1G2 835 aaKnown RBP21.42■■□□□ 1.02
COL20A1-205ENST00000471582 CCDC82Q8N4S0 544 aa21.42■■□□□ 1.02
COL20A1-205ENST00000471582 TUBE1Q9UJT0 475 aa21.42■■□□□ 1.02
COL20A1-205ENST00000471582 R3HCC1Q9Y3T6 440 aaKnown RBP21.42■■□□□ 1.02
COL20A1-205ENST00000471582 QSER1Q2KHR3 1735 aa21.42■■□□□ 1.02
COL20A1-205ENST00000471582 BBOX1O75936 387 aa21.41■■□□□ 1.02
COL20A1-205ENST00000471582 LDHBP07195 334 aaKnown RBP21.41■■□□□ 1.02
COL20A1-205ENST00000471582 BAG6P46379 1132 aa21.41■■□□□ 1.02
COL20A1-205ENST00000471582 SLC15A2Q16348 729 aa21.41■■□□□ 1.02
COL20A1-205ENST00000471582 DPCR1Q3MIW9 517 aa21.41■■□□□ 1.02
COL20A1-205ENST00000471582 CCDC186Q7Z3E2 898 aa21.41■■□□□ 1.02
COL20A1-205ENST00000471582 AOPEPQ8N6M6 819 aa21.41■■□□□ 1.02
COL20A1-205ENST00000471582 ERCC4Q92889 916 aaPredicted RBP21.41■■□□□ 1.02
COL20A1-205ENST00000471582 CEP131Q9UPN4 1083 aa21.41■■□□□ 1.02
COL20A1-205ENST00000471582 HOXA10P31260 410 aaPredicted RBP21.41■■□□□ 1.02
COL20A1-205ENST00000471582 PKN1Q16512 942 aa21.41■■□□□ 1.02
COL20A1-205ENST00000471582 TMTC3Q6ZXV5 915 aa21.41■■□□□ 1.02
COL20A1-205ENST00000471582 ANO8Q9HCE9 1232 aaPredicted RBP21.41■■□□□ 1.02
COL20A1-205ENST00000471582 STK32BQ9NY57 414 aa21.41■■□□□ 1.02
COL20A1-205ENST00000471582 PTPREP23469 700 aa21.4■■□□□ 1.02
COL20A1-205ENST00000471582 ZNF579Q8NAF0 562 aaKnown RBP21.4■■□□□ 1.02
COL20A1-205ENST00000471582 NOL10Q9BSC4 688 aaKnown RBP21.4■■□□□ 1.02
COL20A1-205ENST00000471582 PHF20Q9BVI0 1012 aa21.4■■□□□ 1.02
COL20A1-205ENST00000471582 MKRN1Q9UHC7 482 aaKnown RBP21.4■■□□□ 1.02
COL20A1-205ENST00000471582 TAOK2Q9UL54 1235 aa21.4■■□□□ 1.02
COL20A1-205ENST00000471582 ROBO3Q96MS0 1386 aa21.4■■□□□ 1.02
COL20A1-205ENST00000471582 CERS3Q8IU89 383 aa21.39■■□□□ 1.02
COL20A1-205ENST00000471582 CLIC6Q96NY7 704 aa21.39■■□□□ 1.02
COL20A1-205ENST00000471582 CRAMP1Q96RY5 1269 aa21.39■■□□□ 1.02
COL20A1-205ENST00000471582 KCNH3Q9ULD8 1083 aa21.39■■□□□ 1.02
COL20A1-205ENST00000471582 PYCARDQ9ULZ3 195 aa21.39■■□□□ 1.02
COL20A1-205ENST00000471582 A0A087WWV3 80 aa21.39■■□□□ 1.01
COL20A1-205ENST00000471582 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.39■■□□□ 1.01
COL20A1-205ENST00000471582 KLRG2A4D1S0 409 aaPredicted RBP21.39■■□□□ 1.01
COL20A1-205ENST00000471582 NR5A1Q13285 461 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms