RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 BRAPQ7Z569 592 aa7.47□□□□□ -1.21
SPEN-204ENST00000471538 LINC00301Q8NCQ3 95 aa7.47□□□□□ -1.21
SPEN-204ENST00000471538 FLAD1Q8NFF5 587 aa7.47□□□□□ -1.21
SPEN-204ENST00000471538 SETDB2Q96T68 719 aa7.47□□□□□ -1.21
SPEN-204ENST00000471538 NACAP1Q9BZK3 213 aa7.47□□□□□ -1.21
SPEN-204ENST00000471538 KRT23Q9C075 422 aa7.47□□□□□ -1.21
SPEN-204ENST00000471538 GJB4Q9NTQ9 266 aa7.47□□□□□ -1.21
SPEN-204ENST00000471538 GNL3LQ9NVN8 582 aaKnown RBP7.47□□□□□ -1.21
SPEN-204ENST00000471538 POLR3EQ9NVU0 708 aa7.47□□□□□ -1.21
SPEN-204ENST00000471538 LRP2BPQ9P2M1 347 aa7.47□□□□□ -1.21
SPEN-204ENST00000471538 GOLGA8AA7E2F4 631 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 CPLX1O14810 134 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 PPP1R37O75864 691 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 CDKL5O76039 1030 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 FGRP09769 529 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 RXRAP19793 462 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 TDO2P48775 406 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 PSEN2P49810 448 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 RPS8P62241 208 aaKnown RBP7.46□□□□□ -1.21
SPEN-204ENST00000471538 CEBPZQ03701 1054 aaKnown RBP7.46□□□□□ -1.21
SPEN-204ENST00000471538 PPARAQ07869 468 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 SEC23AQ15436 765 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 TMEM67Q5HYA8 995 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 ADALQ6DHV7 355 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 BICDL1Q6ZP65 573 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 MFSD6Q6ZSS7 791 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 NBPF11Q86T75 865 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 CCAR1Q8IX12 1150 aaKnown RBP7.46□□□□□ -1.21
SPEN-204ENST00000471538 CKAP2LQ8IYA6 745 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 FMR1NBQ8N0W7 255 aaPredicted RBP7.46□□□□□ -1.21
SPEN-204ENST00000471538 MIGA1Q8NAN2 632 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 TDRD7Q8NHU6 1098 aaKnown RBP7.46□□□□□ -1.21
SPEN-204ENST00000471538 ARHGEF1Q92888 912 aaKnown RBP7.46□□□□□ -1.21
SPEN-204ENST00000471538 KCTD12Q96CX2 325 aaKnown RBP7.46□□□□□ -1.21
SPEN-204ENST00000471538 AIFM3Q96NN9 605 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 NLRP3Q96P20 1036 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 ALG1Q9BT22 464 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 BRIP1Q9BX63 1249 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 PCDHA7Q9UN72 937 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 IQSEC3Q9UPP2 1182 aaPredicted RBP7.46□□□□□ -1.21
SPEN-204ENST00000471538 RTCBQ9Y3I0 505 aaKnown RBP7.46□□□□□ -1.21
SPEN-204ENST00000471538 CLIC4Q9Y696 253 aa7.46□□□□□ -1.21
SPEN-204ENST00000471538 MAGEB6P1A0A0J9YX57 407 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 IFIT3O14879 490 aaKnown RBP7.45□□□□□ -1.22
SPEN-204ENST00000471538 CTAGE5O15320 804 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 ZPR1O75312 459 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 FMNL1O95466 1100 aaPredicted RBP7.45□□□□□ -1.22
SPEN-204ENST00000471538 IFNAR1P17181 557 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 MSNP26038 577 aaKnown RBP7.45□□□□□ -1.22
SPEN-204ENST00000471538 U2AF2P26368 475 aaKnown RBP eCLIP7.45□□□□□ -1.22
SPEN-204ENST00000471538 HTRA3P83110 453 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 FAM160A1Q05DH4 1040 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 ANO6Q4KMQ2 910 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 CAVIN4Q5BKX8 364 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 KRT40Q6A162 431 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 TMED8Q6PL24 325 aaPredicted RBP7.45□□□□□ -1.22
SPEN-204ENST00000471538 MICU3Q86XE3 530 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 NBPF5PQ86XG9 351 aaPredicted RBP7.45□□□□□ -1.22
SPEN-204ENST00000471538 KCNG4Q8TDN1 519 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 SDR42E1Q8WUS8 393 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 PHKBQ93100 1093 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 NSUN4Q96CB9 384 aaKnown RBP7.45□□□□□ -1.22
SPEN-204ENST00000471538 WDR90Q96KV7 1748 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 MYL10Q9BUA6 226 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 ANKRD2Q9GZV1 360 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 RNF41Q9H4P4 317 aaPredicted RBP7.45□□□□□ -1.22
SPEN-204ENST00000471538 CBX8Q9HC52 389 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 CD2APQ9Y5K6 639 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.45□□□□□ -1.22
SPEN-204ENST00000471538 BAZ2AQ9UIF9 1905 aaKnown RBP7.45□□□□□ -1.22
SPEN-204ENST00000471538 CCDC88AQ3V6T2 1871 aa7.45□□□□□ -1.22
SPEN-204ENST00000471538 FAM237AA0A1B0GTK4 181 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 UBE2Q2LH0YL09 131 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 SMIM22K7EJ46 135 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 IGSF3O75054 1194 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 OFD1O75665 1012 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 CAVIN2O95810 425 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 POLR3DP05423 398 aaPredicted RBP7.44□□□□□ -1.22
SPEN-204ENST00000471538 IARSP41252 1262 aaKnown RBP7.44□□□□□ -1.22
SPEN-204ENST00000471538 DYNLL1P63167 89 aaKnown RBP7.44□□□□□ -1.22
SPEN-204ENST00000471538 IQCB1Q15051 598 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 PTPAQ15257 358 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 AXDND1Q5T1B0 1012 aaPredicted RBP7.44□□□□□ -1.22
SPEN-204ENST00000471538 ANO1Q5XXA6 986 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 CPLX2Q6PUV4 134 aaKnown RBP7.44□□□□□ -1.22
SPEN-204ENST00000471538 TPTE2Q6XPS3 522 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 LUZP1Q86V48 1076 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 VPS37DQ86XT2 251 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 FSIP1Q8NA03 581 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 MRPS27Q92552 414 aaKnown RBP7.44□□□□□ -1.22
SPEN-204ENST00000471538 MAP3K14Q99558 947 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 IRX2Q9BZI1 471 aaPredicted RBP7.44□□□□□ -1.22
SPEN-204ENST00000471538 RAI14Q9P0K7 980 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 ABCF2Q9UG63 623 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.44□□□□□ -1.22
SPEN-204ENST00000471538 SLC12A7Q9Y666 1083 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 LRRC37AA6NMS7 1700 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 CCDC69A6NI79 296 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 SPTLC2O15270 562 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 PPP6R2O75170 966 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms