RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 TRIM47Q96LD4 638 aa28.32■■■□□ 2.12
RNF220-208ENST00000471494 WDR18Q9BV38 432 aa28.32■■■□□ 2.12
RNF220-208ENST00000471494 FMNL1O95466 1100 aaPredicted RBP28.31■■■□□ 2.12
RNF220-208ENST00000471494 ADD2P35612 726 aa28.31■■■□□ 2.12
RNF220-208ENST00000471494 PABPC4Q13310 644 aaKnown RBP eCLIP28.31■■■□□ 2.12
RNF220-208ENST00000471494 GPATCH3Q96I76 525 aa28.31■■■□□ 2.12
RNF220-208ENST00000471494 ECHDC1Q9NTX5 307 aa28.31■■■□□ 2.12
RNF220-208ENST00000471494 CENPFP49454 3210 aa28.3■■■□□ 2.12
RNF220-208ENST00000471494 BAZ2AQ9UIF9 1905 aaKnown RBP28.3■■■□□ 2.12
RNF220-208ENST00000471494 POLR3DP05423 398 aaPredicted RBP28.3■■■□□ 2.12
RNF220-208ENST00000471494 HOXD10P28358 340 aa28.3■■■□□ 2.12
RNF220-208ENST00000471494 CTGFP29279 349 aa28.3■■■□□ 2.12
RNF220-208ENST00000471494 JAG1P78504 1218 aa28.3■■■□□ 2.12
RNF220-208ENST00000471494 MTMR2Q13614 643 aa28.3■■■□□ 2.12
RNF220-208ENST00000471494 SHROOM1Q2M3G4 852 aaPredicted RBP28.3■■■□□ 2.12
RNF220-208ENST00000471494 SH3D19Q5HYK7 790 aa28.3■■■□□ 2.12
RNF220-208ENST00000471494 NBPF11Q86T75 865 aa28.3■■■□□ 2.12
RNF220-208ENST00000471494 TNRC18O15417 2968 aaPredicted RBP28.29■■■□□ 2.12
RNF220-208ENST00000471494 FCGRTP55899 365 aa28.29■■■□□ 2.12
RNF220-208ENST00000471494 LCORLQ8N3X6 602 aa28.29■■■□□ 2.12
RNF220-208ENST00000471494 SRRDQ9UH36 339 aa28.29■■■□□ 2.12
RNF220-208ENST00000471494 PCDHB15Q9Y5E8 787 aa28.29■■■□□ 2.12
RNF220-208ENST00000471494 BACE1P56817 501 aa28.28■■■□□ 2.12
RNF220-208ENST00000471494 TATDN1Q6P1N9 297 aa28.28■■■□□ 2.12
RNF220-208ENST00000471494 MCM9Q9NXL9 1143 aa28.28■■■□□ 2.12
RNF220-208ENST00000471494 TMOD4Q9NZQ9 345 aa28.28■■■□□ 2.12
RNF220-208ENST00000471494 GH2P01242 217 aa28.27■■■□□ 2.12
RNF220-208ENST00000471494 OSBPP22059 807 aa28.27■■■□□ 2.12
RNF220-208ENST00000471494 SDR42E1Q8WUS8 393 aa28.27■■■□□ 2.12
RNF220-208ENST00000471494 ZNF333Q96JL9 665 aa28.27■■■□□ 2.12
RNF220-208ENST00000471494 ARMT1Q9H993 441 aa28.27■■■□□ 2.12
RNF220-208ENST00000471494 MYPNQ86TC9 1320 aa28.26■■■□□ 2.11
RNF220-208ENST00000471494 C19orf81C9J6K1 198 aa28.26■■■□□ 2.11
RNF220-208ENST00000471494 USP17L10C9JJH3 530 aa28.26■■■□□ 2.11
RNF220-208ENST00000471494 MBD4O95243 580 aa28.26■■■□□ 2.11
RNF220-208ENST00000471494 PLCD1P51178 756 aa28.26■■■□□ 2.11
RNF220-208ENST00000471494 ZSCAN25Q6NSZ9 544 aa28.26■■■□□ 2.11
RNF220-208ENST00000471494 SLFNL1Q499Z3 407 aa28.25■■■□□ 2.11
RNF220-208ENST00000471494 CERKLQ49MI3 558 aaPredicted RBP28.25■■■□□ 2.11
RNF220-208ENST00000471494 ANKRD13CQ8N6S4 541 aa28.25■■■□□ 2.11
RNF220-208ENST00000471494 RAET1EQ8TD07 263 aa28.25■■■□□ 2.11
RNF220-208ENST00000471494 SH3TC2Q8TF17 1288 aa28.25■■■□□ 2.11
RNF220-208ENST00000471494 CRBNQ96SW2 442 aa28.25■■■□□ 2.11
RNF220-208ENST00000471494 ASCC2Q9H1I8 757 aaPredicted RBP28.25■■■□□ 2.11
RNF220-208ENST00000471494 DCP1AQ9NPI6 582 aaPredicted RBP28.25■■■□□ 2.11
RNF220-208ENST00000471494 POTEFA5A3E0 1075 aa28.24■■■□□ 2.11
RNF220-208ENST00000471494 GCLCP48506 637 aaPredicted RBP28.24■■■□□ 2.11
RNF220-208ENST00000471494 UBE3CQ15386 1083 aa28.24■■■□□ 2.11
RNF220-208ENST00000471494 TMEM106CQ9BVX2 250 aa28.24■■■□□ 2.11
RNF220-208ENST00000471494 DOCK3Q8IZD9 2030 aa28.24■■■□□ 2.11
RNF220-208ENST00000471494 IRX3P78415 501 aaPredicted RBP28.23■■■□□ 2.11
RNF220-208ENST00000471494 FAM110CQ1W6H9 321 aa28.23■■■□□ 2.11
RNF220-208ENST00000471494 ABCB5Q2M3G0 1257 aa28.23■■■□□ 2.11
RNF220-208ENST00000471494 SHMT1P34896 483 aa28.22■■■□□ 2.11
RNF220-208ENST00000471494 RAB3GAP1Q15042 981 aa28.22■■■□□ 2.11
RNF220-208ENST00000471494 TSHZ3Q63HK5 1081 aa28.22■■■□□ 2.11
RNF220-208ENST00000471494 FEZ1Q99689 392 aa28.22■■■□□ 2.11
RNF220-208ENST00000471494 CABP5Q9NP86 173 aa28.22■■■□□ 2.11
RNF220-208ENST00000471494 TNPO2O14787 897 aaKnown RBP28.21■■■□□ 2.11
RNF220-208ENST00000471494 CHGBP05060 677 aa28.21■■■□□ 2.11
RNF220-208ENST00000471494 PRKCZQ05513 592 aa28.21■■■□□ 2.11
RNF220-208ENST00000471494 GABPAQ06546 454 aa28.21■■■□□ 2.11
RNF220-208ENST00000471494 DDRGK1Q96HY6 314 aa28.21■■■□□ 2.11
RNF220-208ENST00000471494 ATP8A2Q9NTI2 1148 aa28.21■■■□□ 2.11
RNF220-208ENST00000471494 PRKAB2O43741 272 aa28.2■■■□□ 2.1
RNF220-208ENST00000471494 MYCP01106 439 aaPredicted RBP28.2■■■□□ 2.1
RNF220-208ENST00000471494 USP17L2Q6R6M4 530 aa28.2■■■□□ 2.1
RNF220-208ENST00000471494 CYP2D6P10635 497 aa28.19■■■□□ 2.1
RNF220-208ENST00000471494 HOXA7P31268 230 aaPredicted RBP28.19■■■□□ 2.1
RNF220-208ENST00000471494 AMOTL1Q8IY63 956 aa28.19■■■□□ 2.1
RNF220-208ENST00000471494 KBTBD3Q8NAB2 608 aa28.19■■■□□ 2.1
RNF220-208ENST00000471494 GRK4P32298 578 aa28.18■■■□□ 2.1
RNF220-208ENST00000471494 EVX2Q03828 476 aa28.18■■■□□ 2.1
RNF220-208ENST00000471494 TTC41PQ6P2S7 1318 aa28.18■■■□□ 2.1
RNF220-208ENST00000471494 MPHOSPH10O00566 681 aaKnown RBP28.17■■■□□ 2.1
RNF220-208ENST00000471494 ZYXQ15942 572 aaKnown RBP28.17■■■□□ 2.1
RNF220-208ENST00000471494 COA7Q96BR5 231 aa28.17■■■□□ 2.1
RNF220-208ENST00000471494 PUS7LQ9H0K6 701 aaKnown RBP28.17■■■□□ 2.1
RNF220-208ENST00000471494 EMILIN3Q9NT22 766 aa28.17■■■□□ 2.1
RNF220-208ENST00000471494 ZBTB47Q9UFB7 747 aaPredicted RBP28.17■■■□□ 2.1
RNF220-208ENST00000471494 SWAP70Q9UH65 585 aa28.17■■■□□ 2.1
RNF220-208ENST00000471494 TAOK2Q9UL54 1235 aa28.17■■■□□ 2.1
RNF220-208ENST00000471494 GABRQQ9UN88 632 aa28.17■■■□□ 2.1
RNF220-208ENST00000471494 SLC4A4Q9Y6R1 1079 aa28.17■■■□□ 2.1
RNF220-208ENST00000471494 ERC2O15083 957 aa28.16■■■□□ 2.1
RNF220-208ENST00000471494 USP14P54578 494 aa28.16■■■□□ 2.1
RNF220-208ENST00000471494 SLAIN1Q8ND83 568 aa28.16■■■□□ 2.1
RNF220-208ENST00000471494 BIN2Q9UBW5 565 aaPredicted RBP28.16■■■□□ 2.1
RNF220-208ENST00000471494 EN2P19622 333 aaPredicted RBP28.15■■■□□ 2.1
RNF220-208ENST00000471494 FLT3LGP49771 235 aa28.15■■■□□ 2.1
RNF220-208ENST00000471494 HERVK_113P62684 666 aa28.15■■■□□ 2.1
RNF220-208ENST00000471494 SLC44A5Q8NCS7 719 aa28.15■■■□□ 2.1
RNF220-208ENST00000471494 C12orf42Q96LP6 360 aa28.15■■■□□ 2.1
RNF220-208ENST00000471494 P2RX7Q99572 595 aaKnown RBP28.15■■■□□ 2.1
RNF220-208ENST00000471494 KIAA1683Q9H0B3 1180 aa28.15■■■□□ 2.1
RNF220-208ENST00000471494 SEPT2Q15019 361 aa28.14■■■□□ 2.1
RNF220-208ENST00000471494 ACER1Q8TDN7 264 aa28.14■■■□□ 2.1
RNF220-208ENST00000471494 DYNLL2Q96FJ2 89 aa28.14■■■□□ 2.1
RNF220-208ENST00000471494 MORF4L1Q9UBU8 362 aa28.14■■■□□ 2.1
RNF220-208ENST00000471494 USP17L12C9JPN9 530 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms