RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 SCAF11Q99590 1463 aaKnown RBP4.81□□□□□ -1.64
CSMD2-208ENST00000471438 ANKRD50Q9ULJ7 1429 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 GPRASP1Q5JY77 1395 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 KIF15Q9NS87 1388 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 IQGAP1P46940 1657 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 ZNF503-AS2A6NEH8 195 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 SOX4Q06945 474 aaPredicted RBP4.81□□□□□ -1.64
CSMD2-208ENST00000471438 KCNMB1Q16558 191 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 EXOSC6Q5RKV6 272 aaKnown RBP4.81□□□□□ -1.64
CSMD2-208ENST00000471438 HGSNATQ68CP4 663 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 DBX2Q6ZNG2 339 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 GPR152Q8TDT2 470 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 PREX2Q70Z35 1606 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 IQGAP3Q86VI3 1631 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 PLXNC1O60486 1568 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 AGLP35573 1532 aa4.81□□□□□ -1.64
CSMD2-208ENST00000471438 PRDM15P57071 1507 aaPredicted RBP4.81□□□□□ -1.64
CSMD2-208ENST00000471438 NPHP4O75161 1426 aaPredicted RBP4.8□□□□□ -1.64
CSMD2-208ENST00000471438 PARD3Q8TEW0 1356 aa4.8□□□□□ -1.64
CSMD2-208ENST00000471438 EIF2AK4Q9P2K8 1649 aaKnown RBP4.8□□□□□ -1.64
CSMD2-208ENST00000471438 ZNF644Q9H582 1327 aaPredicted RBP4.8□□□□□ -1.64
CSMD2-208ENST00000471438 LOC100289279A0A1B0GTE1 492 aa4.8□□□□□ -1.64
CSMD2-208ENST00000471438 TMEM88BA6NKF7 163 aa4.8□□□□□ -1.64
CSMD2-208ENST00000471438 NFICP08651 508 aa4.8□□□□□ -1.64
CSMD2-208ENST00000471438 ATP2B4P23634 1241 aa4.8□□□□□ -1.64
CSMD2-208ENST00000471438 AMIGO3Q86WK7 504 aa4.8□□□□□ -1.64
CSMD2-208ENST00000471438 ABI2Q9NYB9 513 aaPredicted RBP4.8□□□□□ -1.64
CSMD2-208ENST00000471438 VIRMAQ69YN4 1812 aaKnown RBP4.8□□□□□ -1.64
CSMD2-208ENST00000471438 A2ML1A8K2U0 1454 aa4.8□□□□□ -1.64
CSMD2-208ENST00000471438 KIAA1210Q9ULL0 1709 aa4.8□□□□□ -1.64
CSMD2-208ENST00000471438 MYBBP1AQ9BQG0 1328 aaKnown RBP4.79□□□□□ -1.64
CSMD2-208ENST00000471438 NFIBO00712 420 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 TCERG1O14776 1098 aaKnown RBP4.79□□□□□ -1.64
CSMD2-208ENST00000471438 DLGAP3O95886 979 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 CYP2E1P05181 493 aaPredicted RBP4.79□□□□□ -1.64
CSMD2-208ENST00000471438 C1QTNF9P0C862 333 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 RAB6AP20340 208 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 PDE12Q6L8Q7 609 aaKnown RBP4.79□□□□□ -1.64
CSMD2-208ENST00000471438 B4GALNT3Q6L9W6 998 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 FAM9BQ8IZU0 186 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 CCDC82Q8N4S0 544 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 FLAD1Q8NFF5 587 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 NETO1Q8TDF5 533 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 C8orf37Q96NL8 207 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 IPO9Q96P70 1041 aaKnown RBP4.79□□□□□ -1.64
CSMD2-208ENST00000471438 NOP58Q9Y2X3 529 aaKnown RBP4.79□□□□□ -1.64
CSMD2-208ENST00000471438 ATP10BO94823 1461 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 PLEKHH2Q8IVE3 1493 aa4.79□□□□□ -1.64
CSMD2-208ENST00000471438 SAMD9LQ8IVG5 1584 aa4.78□□□□□ -1.64
CSMD2-208ENST00000471438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.78□□□□□ -1.64
CSMD2-208ENST00000471438 FAM135AQ9P2D6 1515 aa4.78□□□□□ -1.64
CSMD2-208ENST00000471438 ZBTB39O15060 712 aa4.78□□□□□ -1.64
CSMD2-208ENST00000471438 OGFOD3Q6PK18 319 aa4.78□□□□□ -1.64
CSMD2-208ENST00000471438 PLD6Q8N2A8 252 aaKnown RBP4.78□□□□□ -1.64
CSMD2-208ENST00000471438 RELTQ969Z4 430 aa4.78□□□□□ -1.64
CSMD2-208ENST00000471438 LIN37Q96GY3 246 aaPredicted RBP4.78□□□□□ -1.64
CSMD2-208ENST00000471438 ELP3Q9H9T3 547 aa4.78□□□□□ -1.64
CSMD2-208ENST00000471438 USP35Q9P2H5 1018 aa4.78□□□□□ -1.64
CSMD2-208ENST00000471438 CFDP1Q9UEE9 299 aaPredicted RBP4.78□□□□□ -1.64
CSMD2-208ENST00000471438 SEPT3Q9UH03 358 aa4.78□□□□□ -1.64
CSMD2-208ENST00000471438 VAV3Q9UKW4 847 aa4.78□□□□□ -1.64
CSMD2-208ENST00000471438 PRAG1Q86YV5 1406 aa4.78□□□□□ -1.64
CSMD2-208ENST00000471438 CEP152O94986 1710 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 SHANK3Q9BYB0 1731 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 CCDC141Q6ZP82 1450 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 DEPDC5O75140 1603 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 SOX1O00570 391 aaPredicted RBP4.77□□□□□ -1.65
CSMD2-208ENST00000471438 CD96P40200 585 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 IRX6P78412 446 aaPredicted RBP4.77□□□□□ -1.65
CSMD2-208ENST00000471438 PRKCQQ04759 706 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 IKBKEQ14164 716 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 CYP27C1Q4G0S4 372 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 ZNF438Q7Z4V0 828 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 PMEPA1Q969W9 287 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 NUDT16Q96DE0 195 aaKnown RBP4.77□□□□□ -1.65
CSMD2-208ENST00000471438 SEMA6CQ9H3T2 930 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 CRIM1Q9NZV1 1036 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 SOX13Q9UN79 622 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 ACTL7BQ9Y614 415 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 DIP2CQ9Y2E4 1556 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 SPHKAPQ2M3C7 1700 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 AATKQ6ZMQ8 1374 aa4.77□□□□□ -1.65
CSMD2-208ENST00000471438 MED14O60244 1454 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 UTRNP46939 3433 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 PDE2AO00408 941 aaPredicted RBP4.76□□□□□ -1.65
CSMD2-208ENST00000471438 ADH5P11766 374 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 HOXA5P20719 270 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 RRP1P56182 461 aaKnown RBP4.76□□□□□ -1.65
CSMD2-208ENST00000471438 AAMPQ13685 434 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 ERICH6Q7L0X2 663 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 TMC1Q8TDI8 760 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 CCDC136Q96JN2 1154 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 C20orf173Q96LM9 149 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 REREQ9P2R6 1566 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 ABCC1P33527 1531 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 NUP155O75694 1391 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 NPC1L1Q9UHC9 1359 aa4.76□□□□□ -1.65
CSMD2-208ENST00000471438 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.75□□□□□ -1.65
CSMD2-208ENST00000471438 NPIPB6E9PJ23 425 aa4.75□□□□□ -1.65
CSMD2-208ENST00000471438 CES1P23141 567 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms