RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 ZBTB21Q9ULJ3 1066 aa11.62□□□□□ -0.55
POLR1A-206ENST00000471427 PHIPQ8WWQ0 1821 aa11.62□□□□□ -0.55
POLR1A-206ENST00000471427 MAST2Q6P0Q8 1798 aa11.62□□□□□ -0.55
POLR1A-206ENST00000471427 DOCK1Q14185 1865 aa11.61□□□□□ -0.55
POLR1A-206ENST00000471427 PLCD1P51178 756 aa11.61□□□□□ -0.55
POLR1A-206ENST00000471427 HMGCS2P54868 508 aa11.61□□□□□ -0.55
POLR1A-206ENST00000471427 FAM110CQ1W6H9 321 aa11.61□□□□□ -0.55
POLR1A-206ENST00000471427 ZSCAN25Q6NSZ9 544 aa11.61□□□□□ -0.55
POLR1A-206ENST00000471427 DCP1AQ9NPI6 582 aaPredicted RBP11.61□□□□□ -0.55
POLR1A-206ENST00000471427 ECHDC1Q9NTX5 307 aa11.61□□□□□ -0.55
POLR1A-206ENST00000471427 PCDHB15Q9Y5E8 787 aa11.61□□□□□ -0.55
POLR1A-206ENST00000471427 PDE4DIPQ5VU43 2346 aa11.61□□□□□ -0.55
POLR1A-206ENST00000471427 PTPRFP10586 1907 aa11.6□□□□□ -0.55
POLR1A-206ENST00000471427 POTEFA5A3E0 1075 aa11.6□□□□□ -0.55
POLR1A-206ENST00000471427 POLR3DP05423 398 aaPredicted RBP11.6□□□□□ -0.55
POLR1A-206ENST00000471427 CAPN2P17655 700 aa11.6□□□□□ -0.55
POLR1A-206ENST00000471427 CERKLQ49MI3 558 aaPredicted RBP11.6□□□□□ -0.55
POLR1A-206ENST00000471427 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
POLR1A-206ENST00000471427 EDC3Q96F86 508 aaKnown RBP11.6□□□□□ -0.55
POLR1A-206ENST00000471427 C12orf42Q96LP6 360 aa11.6□□□□□ -0.55
POLR1A-206ENST00000471427 ASCC2Q9H1I8 757 aaPredicted RBP11.6□□□□□ -0.55
POLR1A-206ENST00000471427 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
POLR1A-206ENST00000471427 MCM9Q9NXL9 1143 aa11.6□□□□□ -0.55
POLR1A-206ENST00000471427 TMOD4Q9NZQ9 345 aa11.6□□□□□ -0.55
POLR1A-206ENST00000471427 FOCADQ5VW36 1801 aa11.6□□□□□ -0.55
POLR1A-206ENST00000471427 CDK5RAP2Q96SN8 1893 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 TNRC18O15417 2968 aaPredicted RBP11.59□□□□□ -0.55
POLR1A-206ENST00000471427 SIPA1L1O43166 1804 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 SMARCA5O60264 1052 aaPredicted RBP11.59□□□□□ -0.55
POLR1A-206ENST00000471427 GDF11O95390 407 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 GH2P01242 217 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 GRK4P32298 578 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 SHMT1P34896 483 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 RRP1P56182 461 aaKnown RBP11.59□□□□□ -0.55
POLR1A-206ENST00000471427 IRF5Q13568 498 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 MTMR2Q13614 643 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 AAMPQ13685 434 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 USP17L2Q6R6M4 530 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 LCORLQ8N3X6 602 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 ANKRD13CQ8N6S4 541 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 RAET1EQ8TD07 263 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 GTF3C2Q8WUA4 911 aaPredicted RBP11.59□□□□□ -0.55
POLR1A-206ENST00000471427 GPATCH3Q96I76 525 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 CABP5Q9NP86 173 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 MORF4L1Q9UBU8 362 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 SWAP70Q9UH65 585 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 MYPNQ86TC9 1320 aa11.59□□□□□ -0.55
POLR1A-206ENST00000471427 FLT3LGP49771 235 aa11.58□□□□□ -0.56
POLR1A-206ENST00000471427 USP14P54578 494 aa11.58□□□□□ -0.56
POLR1A-206ENST00000471427 ABCB5Q2M3G0 1257 aa11.58□□□□□ -0.56
POLR1A-206ENST00000471427 KBTBD3Q8NAB2 608 aa11.58□□□□□ -0.56
POLR1A-206ENST00000471427 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
POLR1A-206ENST00000471427 SH3TC2Q8TF17 1288 aa11.58□□□□□ -0.56
POLR1A-206ENST00000471427 COA7Q96BR5 231 aa11.58□□□□□ -0.56
POLR1A-206ENST00000471427 P2RX7Q99572 595 aaKnown RBP11.58□□□□□ -0.56
POLR1A-206ENST00000471427 KIAA1683Q9H0B3 1180 aa11.58□□□□□ -0.56
POLR1A-206ENST00000471427 MYH1P12882 1939 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 TNPO2O14787 897 aaKnown RBP11.57□□□□□ -0.56
POLR1A-206ENST00000471427 ZFYP08048 801 aaPredicted RBP11.57□□□□□ -0.56
POLR1A-206ENST00000471427 EN2P19622 333 aaPredicted RBP11.57□□□□□ -0.56
POLR1A-206ENST00000471427 GUCY1A2P33402 732 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 IRX3P78415 501 aaPredicted RBP11.57□□□□□ -0.56
POLR1A-206ENST00000471427 PRKCZQ05513 592 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 SHROOM1Q2M3G4 852 aaPredicted RBP11.57□□□□□ -0.56
POLR1A-206ENST00000471427 SLC4A8Q2Y0W8 1093 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 C12orf60Q5U649 245 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 GIMAP6Q6P9H5 292 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 NKX2-3Q8TAU0 364 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 SDR42E1Q8WUS8 393 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 ARMT1Q9H993 441 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 GJD2Q9UKL4 321 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 GABRQQ9UN88 632 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 TTC41PQ6P2S7 1318 aa11.57□□□□□ -0.56
POLR1A-206ENST00000471427 USP17L15C9J2P7 530 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 USP17L13C9JLJ4 530 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 USP17L11C9JVI0 530 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 USP17L18D6R9N7 530 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 USP17L22D6RA61 530 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 USP17L17D6RBQ6 530 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 USP17L19D6RCP7 530 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 USP17L20D6RJB6 530 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 PRKAB2O43741 272 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 MBD4O95243 580 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 GJB1P08034 283 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 HERVK_113P62684 666 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 UBXN2AP68543 259 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 USP17L24Q0WX57 530 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 HDAC1Q13547 482 aaPredicted RBP11.56□□□□□ -0.56
POLR1A-206ENST00000471427 RAB3GAP1Q15042 981 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 LRRFIP1Q32MZ4 808 aaKnown RBP11.56□□□□□ -0.56
POLR1A-206ENST00000471427 SLFNL1Q499Z3 407 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 LBX2Q6XYB7 198 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 CATSPERGQ6ZRH7 1159 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 GPRC5AQ8NFJ5 357 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 DDRGK1Q96HY6 314 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 CCDC17Q96LX7 622 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 STRBPQ96SI9 672 aaKnown RBP11.56□□□□□ -0.56
POLR1A-206ENST00000471427 PUS7LQ9H0K6 701 aaKnown RBP11.56□□□□□ -0.56
POLR1A-206ENST00000471427 BCL11AQ9H165 835 aa11.56□□□□□ -0.56
POLR1A-206ENST00000471427 RBPJLQ9UBG7 517 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms