RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 PRDM5Q9NQX1 630 aaPredicted RBP3.85□□□□□ -1.79
COMMD3-209ENST00000471350 PCDHA4Q9UN74 947 aa3.85□□□□□ -1.79
COMMD3-209ENST00000471350 SPG7Q9UQ90 795 aa3.85□□□□□ -1.79
COMMD3-209ENST00000471350 GFRA2O00451 464 aa3.84□□□□□ -1.79
COMMD3-209ENST00000471350 ESR1P03372 595 aa3.84□□□□□ -1.79
COMMD3-209ENST00000471350 C1QTNF9P0C862 333 aa3.84□□□□□ -1.79
COMMD3-209ENST00000471350 GDNFP39905 211 aa3.84□□□□□ -1.79
COMMD3-209ENST00000471350 MAPK8P45983 427 aa3.84□□□□□ -1.79
COMMD3-209ENST00000471350 KCT2Q8NC54 265 aa3.84□□□□□ -1.79
COMMD3-209ENST00000471350 FAM53CQ9NYF3 392 aa3.84□□□□□ -1.79
COMMD3-209ENST00000471350 CYP8B1Q9UNU6 501 aa3.84□□□□□ -1.79
COMMD3-209ENST00000471350 GNAT3A8MTJ3 354 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 WASH4PA8MWX3 477 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 PATL2C9JE40 543 aaKnown RBP3.83□□□□□ -1.8
COMMD3-209ENST00000471350 H3BS24 57 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 LMNB1P20700 586 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 AFMP43652 599 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 FGD1P98174 961 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 DIEXFQ68CQ4 756 aaKnown RBP3.83□□□□□ -1.8
COMMD3-209ENST00000471350 MFSD4AQ8N468 514 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 ZNF507Q8TCN5 953 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 ELMO3Q96BJ8 720 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 KIRREL1Q96J84 757 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 C12orf49Q9H741 205 aa3.83□□□□□ -1.8
COMMD3-209ENST00000471350 PRAMEF27A3QJZ7 478 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 CST3P01034 146 aaPredicted RBP3.82□□□□□ -1.8
COMMD3-209ENST00000471350 USP17L7P0C7H9 530 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 ERVFC1P60507 584 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 TNK2Q07912 1038 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 PKN1Q16512 942 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 SFRP5Q5T4F7 317 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 CDKAL1Q5VV42 579 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 PRAMEF13Q5VWM6 474 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 KRTAP5-3Q6L8H2 238 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 THAP5Q7Z6K1 395 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 NPAS4Q8IUM7 802 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 Q96M66 194 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 FRMD6Q96NE9 622 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 ASB16Q96NS5 453 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 SLC38A3Q99624 504 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 MIPEPQ99797 713 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 CD320Q9NPF0 282 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 RNF19AQ9NV58 838 aa3.82□□□□□ -1.8
COMMD3-209ENST00000471350 DNAJC25-GNG10A0A024R161 153 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 P4HBP07237 508 aaKnown RBP3.81□□□□□ -1.8
COMMD3-209ENST00000471350 MED14OSP0DP75 135 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 RAP1GAPP47736 663 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 KCNA1Q09470 495 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 GAB4Q2WGN9 574 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 RALGPS1Q5JS13 557 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 WIPI1Q5MNZ9 446 aaPredicted RBP3.81□□□□□ -1.8
COMMD3-209ENST00000471350 LETMD1Q6P1Q0 360 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 SYDE1Q6ZW31 735 aaPredicted RBP3.81□□□□□ -1.8
COMMD3-209ENST00000471350 HDXQ7Z353 690 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 AMIGO3Q86WK7 504 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 LRRC56Q8IYG6 542 aaPredicted RBP3.81□□□□□ -1.8
COMMD3-209ENST00000471350 MFSD2AQ8NA29 543 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 DNAJB8Q8NHS0 232 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 PPP1R13LQ8WUF5 828 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 ALPK1Q96QP1 1244 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 FAM8A1Q9UBU6 413 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 TJP2Q9UDY2 1190 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 PCDHB5Q9Y5E4 795 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 SNCAIPQ9Y6H5 919 aa3.81□□□□□ -1.8
COMMD3-209ENST00000471350 FAM155AB1AL88 458 aaPredicted RBP3.8□□□□□ -1.8
COMMD3-209ENST00000471350 SRFP11831 508 aa3.8□□□□□ -1.8
COMMD3-209ENST00000471350 TMEM67Q5HYA8 995 aa3.8□□□□□ -1.8
COMMD3-209ENST00000471350 ZNF746Q6NUN9 644 aaPredicted RBP3.8□□□□□ -1.8
COMMD3-209ENST00000471350 TTLL10Q6ZVT0 673 aa3.8□□□□□ -1.8
COMMD3-209ENST00000471350 SV2BQ7L1I2 683 aa3.8□□□□□ -1.8
COMMD3-209ENST00000471350 SIAH1Q8IUQ4 282 aa3.8□□□□□ -1.8
COMMD3-209ENST00000471350 HID1Q8IV36 788 aa3.8□□□□□ -1.8
COMMD3-209ENST00000471350 UBE2FQ969M7 185 aa3.8□□□□□ -1.8
COMMD3-209ENST00000471350 DUSP15Q9H1R2 295 aaPredicted RBP3.8□□□□□ -1.8
COMMD3-209ENST00000471350 HPXP02790 462 aa3.79□□□□□ -1.8
COMMD3-209ENST00000471350 ZSCAN22P10073 491 aaPredicted RBP3.79□□□□□ -1.8
COMMD3-209ENST00000471350 GRK4P32298 578 aa3.79□□□□□ -1.8
COMMD3-209ENST00000471350 SEPT6Q14141 434 aa3.79□□□□□ -1.8
COMMD3-209ENST00000471350 TTBK2Q6IQ55 1244 aa3.79□□□□□ -1.8
COMMD3-209ENST00000471350 MRPL41Q8IXM3 137 aaKnown RBP3.79□□□□□ -1.8
COMMD3-209ENST00000471350 TOX2Q96NM4 488 aa3.79□□□□□ -1.8
COMMD3-209ENST00000471350 DIRC2Q96SL1 478 aa3.79□□□□□ -1.8
COMMD3-209ENST00000471350 PPP1R16BQ96T49 567 aa3.79□□□□□ -1.8
COMMD3-209ENST00000471350 DPH2Q9BQC3 489 aaPredicted RBP3.79□□□□□ -1.8
COMMD3-209ENST00000471350 ADAMTS10Q9H324 1103 aa3.79□□□□□ -1.8
COMMD3-209ENST00000471350 TPX2Q9ULW0 747 aaKnown RBP3.79□□□□□ -1.8
COMMD3-209ENST00000471350 TTF2Q9UNY4 1162 aaKnown RBP3.79□□□□□ -1.8
COMMD3-209ENST00000471350 IVNS1ABPQ9Y6Y0 642 aa3.79□□□□□ -1.8
COMMD3-209ENST00000471350 CBX7O95931 251 aa3.78□□□□□ -1.8
COMMD3-209ENST00000471350 LDHBP07195 334 aaKnown RBP3.78□□□□□ -1.8
COMMD3-209ENST00000471350 CYP7A1P22680 504 aa3.78□□□□□ -1.8
COMMD3-209ENST00000471350 GLDCP23378 1020 aa3.78□□□□□ -1.8
COMMD3-209ENST00000471350 EIF4BP23588 611 aaKnown RBP3.78□□□□□ -1.8
COMMD3-209ENST00000471350 ETF1P62495 437 aaKnown RBP3.78□□□□□ -1.8
COMMD3-209ENST00000471350 RPS26P62854 115 aaKnown RBP3.78□□□□□ -1.8
COMMD3-209ENST00000471350 TIGD5Q53EQ6 642 aa3.78□□□□□ -1.8
COMMD3-209ENST00000471350 AGMOQ6ZNB7 445 aa3.78□□□□□ -1.8
COMMD3-209ENST00000471350 TTC6Q86TZ1 520 aa3.78□□□□□ -1.8
COMMD3-209ENST00000471350 CDH24Q86UP0 819 aa3.78□□□□□ -1.8
COMMD3-209ENST00000471350 FBXO15Q8NCQ5 510 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms