RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 CRACR2BQ8N4Y2 399 aaPredicted RBP13.93□□□□□ -0.18
MRPL40-203ENST00000471259 SPATA5Q8NB90 893 aa13.93□□□□□ -0.18
MRPL40-203ENST00000471259 TRIB2Q92519 343 aa13.93□□□□□ -0.18
MRPL40-203ENST00000471259 NEUROD6Q96NK8 337 aa13.93□□□□□ -0.18
MRPL40-203ENST00000471259 LRP2BPQ9P2M1 347 aa13.93□□□□□ -0.18
MRPL40-203ENST00000471259 ADORA1P30542 326 aa13.92□□□□□ -0.18
MRPL40-203ENST00000471259 HERVK_113P62684 666 aa13.92□□□□□ -0.18
MRPL40-203ENST00000471259 MTMR2Q13614 643 aa13.92□□□□□ -0.18
MRPL40-203ENST00000471259 CCDC84Q86UT8 332 aaPredicted RBP13.92□□□□□ -0.18
MRPL40-203ENST00000471259 NSUN4Q96CB9 384 aaKnown RBP13.92□□□□□ -0.18
MRPL40-203ENST00000471259 PA2G4Q9UQ80 394 aaKnown RBP13.92□□□□□ -0.18
MRPL40-203ENST00000471259 DDX60LQ5H9U9 1706 aaKnown RBP13.92□□□□□ -0.18
MRPL40-203ENST00000471259 SRGAP3O43295 1099 aa13.91□□□□□ -0.18
MRPL40-203ENST00000471259 HLA-DOAP06340 250 aa13.91□□□□□ -0.18
MRPL40-203ENST00000471259 MFSD14CQ5VZR4 134 aa13.91□□□□□ -0.18
MRPL40-203ENST00000471259 PLEKHH3Q7Z736 793 aa13.91□□□□□ -0.18
MRPL40-203ENST00000471259 CERS3Q8IU89 383 aa13.91□□□□□ -0.18
MRPL40-203ENST00000471259 APBA2Q99767 749 aa13.91□□□□□ -0.18
MRPL40-203ENST00000471259 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.91□□□□□ -0.18
MRPL40-203ENST00000471259 ATAD5Q96QE3 1844 aa13.91□□□□□ -0.18
MRPL40-203ENST00000471259 FAM196BA6NMK8 535 aa13.9□□□□□ -0.18
MRPL40-203ENST00000471259 COL6A1P12109 1028 aa13.9□□□□□ -0.18
MRPL40-203ENST00000471259 ERVK-9P63128 1117 aa13.9□□□□□ -0.18
MRPL40-203ENST00000471259 ERVK-24P63145 666 aa13.9□□□□□ -0.18
MRPL40-203ENST00000471259 CACNB2Q08289 660 aaPredicted RBP13.9□□□□□ -0.18
MRPL40-203ENST00000471259 USP17L2Q6R6M4 530 aa13.9□□□□□ -0.18
MRPL40-203ENST00000471259 Q7L0L9 218 aa13.9□□□□□ -0.18
MRPL40-203ENST00000471259 P2RX7Q99572 595 aaKnown RBP13.9□□□□□ -0.18
MRPL40-203ENST00000471259 HMG20BQ9P0W2 317 aa13.9□□□□□ -0.18
MRPL40-203ENST00000471259 IVNS1ABPQ9Y6Y0 642 aa13.9□□□□□ -0.18
MRPL40-203ENST00000471259 PFASO15067 1338 aa13.9□□□□□ -0.19
MRPL40-203ENST00000471259 ARID4AP29374 1257 aaPredicted RBP13.89□□□□□ -0.19
MRPL40-203ENST00000471259 SLFN5Q08AF3 891 aa13.89□□□□□ -0.19
MRPL40-203ENST00000471259 TFCP2Q12800 502 aa13.89□□□□□ -0.19
MRPL40-203ENST00000471259 TRIM32Q13049 653 aa13.89□□□□□ -0.19
MRPL40-203ENST00000471259 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
MRPL40-203ENST00000471259 NAA16Q6N069 864 aaPredicted RBP13.89□□□□□ -0.19
MRPL40-203ENST00000471259 GPR142Q7Z601 462 aa13.89□□□□□ -0.19
MRPL40-203ENST00000471259 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.89□□□□□ -0.19
MRPL40-203ENST00000471259 EDC3Q96F86 508 aaKnown RBP13.89□□□□□ -0.19
MRPL40-203ENST00000471259 RABGAP1Q9Y3P9 1069 aa13.89□□□□□ -0.19
MRPL40-203ENST00000471259 USP14P54578 494 aa13.88□□□□□ -0.19
MRPL40-203ENST00000471259 MAP2K5Q13163 448 aa13.88□□□□□ -0.19
MRPL40-203ENST00000471259 MTX1Q13505 466 aa13.88□□□□□ -0.19
MRPL40-203ENST00000471259 CCDC158Q5M9N0 1113 aa13.88□□□□□ -0.19
MRPL40-203ENST00000471259 ZNF697Q5TEC3 545 aa13.88□□□□□ -0.19
MRPL40-203ENST00000471259 PAGR1Q9BTK6 254 aa13.88□□□□□ -0.19
MRPL40-203ENST00000471259 NOB1Q9ULX3 412 aaKnown RBP13.88□□□□□ -0.19
MRPL40-203ENST00000471259 COL6A3P12111 3177 aa13.88□□□□□ -0.19
MRPL40-203ENST00000471259 USP17L15C9J2P7 530 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 USP17L13C9JLJ4 530 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 USP17L11C9JVI0 530 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 USP17L18D6R9N7 530 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 USP17L22D6RA61 530 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 USP17L17D6RBQ6 530 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 USP17L19D6RCP7 530 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 USP17L20D6RJB6 530 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 SLURP2P0DP57 97 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 PPP4CP60510 307 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 MDM2Q00987 491 aaPredicted RBP13.87□□□□□ -0.19
MRPL40-203ENST00000471259 ATP2B2Q01814 1243 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 USP17L24Q0WX57 530 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 MORN1Q5T089 497 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 LHX8Q68G74 356 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 METTL16Q86W50 562 aaKnown RBP13.87□□□□□ -0.19
MRPL40-203ENST00000471259 ARHGAP45Q92619 1136 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 USP6NLQ92738 828 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 FEZ1Q99689 392 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 RBPJLQ9UBG7 517 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 LAMA3Q16787 3333 aa13.87□□□□□ -0.19
MRPL40-203ENST00000471259 SLC15A5A6NIM6 579 aa13.86□□□□□ -0.19
MRPL40-203ENST00000471259 POTEB2H3BUK9 544 aa13.86□□□□□ -0.19
MRPL40-203ENST00000471259 LRRC26Q2I0M4 334 aa13.86□□□□□ -0.19
MRPL40-203ENST00000471259 WDR78Q5VTH9 848 aa13.86□□□□□ -0.19
MRPL40-203ENST00000471259 TMED8Q6PL24 325 aaPredicted RBP13.86□□□□□ -0.19
MRPL40-203ENST00000471259 ARRDC4Q8NCT1 418 aa13.86□□□□□ -0.19
MRPL40-203ENST00000471259 SH3RF3Q8TEJ3 882 aaPredicted RBP13.86□□□□□ -0.19
MRPL40-203ENST00000471259 TGFBRAP1Q8WUH2 860 aa13.86□□□□□ -0.19
MRPL40-203ENST00000471259 LPAR1Q92633 364 aa13.86□□□□□ -0.19
MRPL40-203ENST00000471259 SENP6Q9GZR1 1112 aaPredicted RBP13.86□□□□□ -0.19
MRPL40-203ENST00000471259 AATFQ9NY61 560 aaKnown RBP eCLIP13.86□□□□□ -0.19
MRPL40-203ENST00000471259 SLC5A4Q9NY91 659 aa13.86□□□□□ -0.19
MRPL40-203ENST00000471259 ZBTB21Q9ULJ3 1066 aa13.86□□□□□ -0.19
MRPL40-203ENST00000471259 PLXNB2O15031 1838 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 DNM1LO00429 736 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 IPO8O15397 1037 aaKnown RBP13.85□□□□□ -0.19
MRPL40-203ENST00000471259 CNGA1P29973 690 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 CCND3P30281 292 aaPredicted RBP13.85□□□□□ -0.19
MRPL40-203ENST00000471259 TTC39AQ5SRH9 613 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 TBC1D9Q6ZT07 1266 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 ZNF384Q8TF68 577 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 C12orf42Q96LP6 360 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 MEIS3Q99687 375 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 COL25A1Q9BXS0 654 aaPredicted RBP13.85□□□□□ -0.19
MRPL40-203ENST00000471259 TXNRD2Q9NNW7 524 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 CABP5Q9NP86 173 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 DDX20Q9UHI6 824 aaKnown RBP13.85□□□□□ -0.19
MRPL40-203ENST00000471259 CUL9Q8IWT3 2517 aa13.85□□□□□ -0.19
MRPL40-203ENST00000471259 KBTBD13C9JR72 458 aa13.84□□□□□ -0.19
MRPL40-203ENST00000471259 GNAI2P04899 355 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms