RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 NAPBQ9H115 298 aa10.8□□□□□ -0.68
PTPRE-207ENST00000471218 CSADQ9Y600 493 aa10.8□□□□□ -0.68
PTPRE-207ENST00000471218 GAKO14976 1311 aa10.8□□□□□ -0.68
PTPRE-207ENST00000471218 KIAA0100Q14667 2235 aaKnown RBP10.8□□□□□ -0.68
PTPRE-207ENST00000471218 WTIPA6NIX2 430 aaPredicted RBP10.79□□□□□ -0.68
PTPRE-207ENST00000471218 GSG1L2A8MUP6 293 aa10.79□□□□□ -0.68
PTPRE-207ENST00000471218 E7EWF7 191 aa10.79□□□□□ -0.68
PTPRE-207ENST00000471218 MCM5P33992 734 aa10.79□□□□□ -0.68
PTPRE-207ENST00000471218 RCAN1P53805 252 aa10.79□□□□□ -0.68
PTPRE-207ENST00000471218 CRHR2Q13324 411 aa10.79□□□□□ -0.68
PTPRE-207ENST00000471218 RALYLQ86SE5 291 aaKnown RBP10.79□□□□□ -0.68
PTPRE-207ENST00000471218 IFNL3Q8IZI9 196 aa10.79□□□□□ -0.68
PTPRE-207ENST00000471218 NCOA7Q8NI08 942 aa10.79□□□□□ -0.68
PTPRE-207ENST00000471218 CLRN2A0PK11 232 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 F8W031 263 aaPredicted RBP10.78□□□□□ -0.68
PTPRE-207ENST00000471218 IGF2BP3O00425 579 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTPRE-207ENST00000471218 CAPN2P17655 700 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 PTMSP20962 102 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 AK2P54819 239 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 EXOSC10Q01780 885 aaKnown RBP10.78□□□□□ -0.68
PTPRE-207ENST00000471218 ADCK5Q3MIX3 580 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 SLC9C1Q4G0N8 1177 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 SBK1Q52WX2 424 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 HABP4Q5JVS0 413 aaKnown RBP10.78□□□□□ -0.68
PTPRE-207ENST00000471218 MFSD14BQ5SR56 506 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 NBPF12Q5TAG4 269 aaPredicted RBP10.78□□□□□ -0.68
PTPRE-207ENST00000471218 STAG1Q8WVM7 1258 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 KRT23Q9C075 422 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 R3HDMLQ9H3Y0 253 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 TMOD2Q9NZR1 351 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 ARPP21Q9UBL0 812 aaPredicted RBP10.78□□□□□ -0.68
PTPRE-207ENST00000471218 SLC4A4Q9Y6R1 1079 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 LAMA4Q16363 1823 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 MROH7-TTC4A0A0A0MT08 1334 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 MYH13Q9UKX3 1938 aa10.78□□□□□ -0.68
PTPRE-207ENST00000471218 MKI67P46013 3256 aaKnown RBP10.78□□□□□ -0.68
PTPRE-207ENST00000471218 GPR75-ASB3A0A0A6YYF3 556 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 CHGBP05060 677 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 SLC3A2P08195 630 aaKnown RBP10.77□□□□□ -0.69
PTPRE-207ENST00000471218 FGRP09769 529 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 CETPP11597 493 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 HOXD10P28358 340 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 PRDX5P30044 214 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 TDO2P48775 406 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 CHAF1AQ13111 956 aaPredicted RBP10.77□□□□□ -0.69
PTPRE-207ENST00000471218 TAF1CQ15572 869 aaPredicted RBP10.77□□□□□ -0.69
PTPRE-207ENST00000471218 CLEC17AQ6ZS10 378 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 AMOTL1Q8IY63 956 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 MB21D2Q8IYB1 491 aaPredicted RBP10.77□□□□□ -0.69
PTPRE-207ENST00000471218 LCORLQ8N3X6 602 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 CERS5Q8N5B7 392 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 CD99L2Q8TCZ2 262 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 ZNF384Q8TF68 577 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 OPTNQ96CV9 577 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 ZNF274Q96GC6 653 aaPredicted RBP10.77□□□□□ -0.69
PTPRE-207ENST00000471218 CLMNQ96JQ2 1002 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 TMEM87BQ96K49 555 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 LLPHQ9BRT6 129 aaKnown RBP10.77□□□□□ -0.69
PTPRE-207ENST00000471218 EPB41L4AQ9HCS5 686 aaPredicted RBP10.77□□□□□ -0.69
PTPRE-207ENST00000471218 ZNF70Q9UC06 446 aaPredicted RBP10.77□□□□□ -0.69
PTPRE-207ENST00000471218 TTF2Q9UNY4 1162 aaKnown RBP10.77□□□□□ -0.69
PTPRE-207ENST00000471218 IQSEC3Q9UPP2 1182 aaPredicted RBP10.77□□□□□ -0.69
PTPRE-207ENST00000471218 KIF3AQ9Y496 699 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 ROBO3Q96MS0 1386 aa10.77□□□□□ -0.69
PTPRE-207ENST00000471218 CENPFP49454 3210 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 NPM3O75607 178 aaKnown RBP10.76□□□□□ -0.69
PTPRE-207ENST00000471218 APPP05067 770 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 PDCP20941 246 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 LIFRP42702 1097 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 SLC4A3P48751 1232 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 SART3Q15020 963 aaKnown RBP10.76□□□□□ -0.69
PTPRE-207ENST00000471218 SLC4A8Q2Y0W8 1093 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 AKNAD1Q5T1N1 836 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 FKBP1CQ5VVH2 108 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 HHIPL2Q6UWX4 724 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 TMTC2Q8N394 836 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 NKX2-3Q8TAU0 364 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 ARMT1Q9H993 441 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 ZNF287Q9HBT7 754 aa10.76□□□□□ -0.69
PTPRE-207ENST00000471218 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.76□□□□□ -0.69
PTPRE-207ENST00000471218 CCL15-CCL14A0A0B4J2E2 113 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 POTEFA5A3E0 1075 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 ORC4O43929 436 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 DHX16O60231 1041 aaKnown RBP10.75□□□□□ -0.69
PTPRE-207ENST00000471218 SNAPC2Q13487 334 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 PPP2R5BQ15173 497 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 CCL15Q16663 113 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 SLFNL1Q499Z3 407 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 CCDC178Q5BJE1 867 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 DCAF15Q66K64 600 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 MFSD6Q6ZSS7 791 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 STOX1Q6ZVD7 989 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 ADGRA1Q86SQ6 560 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 FAM83AQ86UY5 434 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 ERO1BQ86YB8 467 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 TEKT1Q969V4 418 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 ZNF333Q96JL9 665 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms