RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 TUBB4AP04350 444 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 ECE1P42892 770 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 RNF169Q8NCN4 708 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 EXOC7Q9UPT5 735 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 HLA-DPA1P20036 260 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 RUFY4Q6ZNE9 571 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 CDAN1Q8IWY9 1227 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 RASEFQ8IZ41 740 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 KLHDC4Q8TBB5 520 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 TBC1D2Q9BYX2 928 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 SPTLC2O15270 562 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 EEF1B2P24534 225 aaKnown RBP7.62□□□□□ -1.19
BRCA1-210ENST00000471181 ARHGAP4P98171 946 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 TMTC2Q8N394 836 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.62□□□□□ -1.19
BRCA1-210ENST00000471181 CDC26Q8NHZ8 85 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 CCDC124Q96CT7 223 aaKnown RBP7.62□□□□□ -1.19
BRCA1-210ENST00000471181 IWS1Q96ST2 819 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 VPS16Q9H269 839 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 THEGQ9P2T0 379 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 GJA3Q9Y6H8 435 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 FYCO1Q9BQS8 1478 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 RAB3GAP1Q15042 981 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 RYBPQ8N488 228 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 POLR3CQ9BUI4 534 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 METTL14Q9HCE5 456 aaKnown RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 TMOD4Q9NZQ9 345 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 NFKBIL1Q9UBC1 381 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 CAPN7Q9Y6W3 813 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 SH3BGRP55822 239 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 ZNF174Q15697 407 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 LRRC23Q53EV4 343 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 ZC3H12BQ5HYM0 836 aaKnown RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 P3H4Q92791 437 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 SECISBP2LQ93073 1101 aaKnown RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 UIMC1Q96RL1 719 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 SYNDIG1LA6NDD5 238 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 PFDN6O15212 129 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 ARHGDIAP52565 204 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 CWF19L2Q2TBE0 894 aaKnown RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 LETM2Q2VYF4 491 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 TRIM60Q495X7 471 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 FCHSD1Q86WN1 690 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 PPWD1Q96BP3 646 aaKnown RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 BEGAINQ9BUH8 593 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 GPCPD1Q9NPB8 672 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 SAP30BPQ9UHR5 308 aaKnown RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 PNMA2Q9UL42 364 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 FIS1Q9Y3D6 152 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 SYNJ2BP-COX16A0A087WUM0 186 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 PPFIA4O75335 1185 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 XPAP23025 273 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 PDE4DQ08499 809 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 IQCB1Q15051 598 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 RINLQ6ZS11 566 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 TRMT10CQ7L0Y3 403 aaKnown RBP7.61□□□□□ -1.19
BRCA1-210ENST00000471181 CHST3Q7LGC8 479 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 RPAINQ86UA6 219 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 ATP6V1E2Q96A05 226 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 COX16Q9P0S2 106 aa7.61□□□□□ -1.19
BRCA1-210ENST00000471181 FAM95CA0A1B0GW59 222 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 VWA3AA6NCI4 1184 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 RXRAP19793 462 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 YARSP54577 528 aaKnown RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 FLOT2Q14254 428 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 LONRF2Q1L5Z9 754 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 NCAPH2Q6IBW4 605 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 CYP26C1Q6V0L0 522 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 SND1Q7KZF4 910 aaKnown RBP eCLIP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 UBE2Q2Q8WVN8 375 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 JPH4Q96JJ6 628 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 TBC1D7Q9P0N9 293 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 KLHL14Q9P2G3 628 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 SLC13A4Q9UKG4 626 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 JAG2Q9Y219 1238 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 FNDC3AQ9Y2H6 1198 aaKnown RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 PTPDC1A2A3K4 754 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 GOLGA8CPA6NN73 597 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 DNM1Q05193 864 aaKnown RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 TYRO3Q06418 890 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 LRMPQ12912 555 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 PGBD1Q96JS3 809 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 IFT122Q9HBG6 1241 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 ST7Q9NRC1 585 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 MCM9Q9NXL9 1143 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 DDX41Q9UJV9 622 aaKnown RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 NUP160Q12769 1436 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 EXOC5O00471 708 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 PHBP35232 272 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 GUCY2FP51841 1108 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 PMS1P54277 932 aaKnown RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 MTMR3Q13615 1198 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 RCN2Q14257 317 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 OSCARQ8IYS5 282 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 NME8Q8N427 588 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 UBN1Q9NPG3 1134 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 ANAPC5Q9UJX4 755 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 MAGI1Q96QZ7 1491 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 DHX29Q7Z478 1369 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms