RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 TNIP1Q15025 636 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 TSGA10IPQ3SY00 556 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 EAPPQ56P03 285 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-216ENST00000470998 TNNI3KQ59H18 835 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 UBE3BQ7Z3V4 1068 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 ZBTB38Q8NAP3 1195 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-216ENST00000470998 HPS1Q92902 700 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 TNPO1Q92973 898 aaKnown RBP6.75□□□□□ -1.33
HDAC8-216ENST00000470998 CDK15Q96Q40 435 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 LSG1Q9H089 658 aaKnown RBP6.75□□□□□ -1.33
HDAC8-216ENST00000470998 ALDH8A1Q9H2A2 487 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-216ENST00000470998 ADARB2Q9NS39 739 aaKnown RBP6.75□□□□□ -1.33
HDAC8-216ENST00000470998 AKAP2Q9Y2D5 859 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-216ENST00000470998 GJA3Q9Y6H8 435 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 FPGT-TNNI3KV9GXZ4 949 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 SCN4AP35499 1836 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 NUP98P52948 1817 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 CCDC171Q6TFL3 1326 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 CNTNAP1P78357 1384 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 MED23Q9ULK4 1368 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 IRS4O14654 1257 aaPredicted RBP6.74□□□□□ -1.33
HDAC8-216ENST00000470998 ST8SIA5O15466 376 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 TRAK2O60296 914 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 MBD3O95983 291 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 ZFYP08048 801 aaPredicted RBP6.74□□□□□ -1.33
HDAC8-216ENST00000470998 HMGB1P09429 215 aaKnown RBP6.74□□□□□ -1.33
HDAC8-216ENST00000470998 HSPA1AP0DMV8 641 aaKnown RBP6.74□□□□□ -1.33
HDAC8-216ENST00000470998 HSPA1BP0DMV9 641 aaKnown RBP6.74□□□□□ -1.33
HDAC8-216ENST00000470998 SCNN1DP51172 638 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 NR1H3Q13133 447 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 AOC3Q16853 763 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 KLHL40Q2TBA0 621 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 VPS53Q5VIR6 699 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 TSHZ3Q63HK5 1081 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 CIAPIN1Q6FI81 312 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 EAF2Q96CJ1 260 aaPredicted RBP6.74□□□□□ -1.33
HDAC8-216ENST00000470998 FAM89AQ96GI7 184 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 TMX3Q96JJ7 454 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 EYA3Q99504 573 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 HAUS7Q99871 368 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 FSD1Q9BTV5 496 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 ATP6V1DQ9Y5K8 247 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 ZNF609O15014 1411 aa6.74□□□□□ -1.33
HDAC8-216ENST00000470998 WDR33Q9C0J8 1336 aaKnown RBP6.74□□□□□ -1.33
HDAC8-216ENST00000470998 RPAP1Q9BWH6 1393 aaPredicted RBP6.73□□□□□ -1.33
HDAC8-216ENST00000470998 RASSF10A6NK89 507 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 ATP5J2-PTCD1G3V325 749 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 EYA2O00167 538 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 CAPN5O15484 640 aaPredicted RBP6.73□□□□□ -1.33
HDAC8-216ENST00000470998 PDE8AO60658 829 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 FBXO45P0C2W1 286 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 MRE11P49959 708 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 WDR4P57081 412 aaKnown RBP6.73□□□□□ -1.33
HDAC8-216ENST00000470998 RAB15P59190 212 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 RPS8P62241 208 aaKnown RBP6.73□□□□□ -1.33
HDAC8-216ENST00000470998 CXCL9Q07325 125 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 DHX9Q08211 1270 aaKnown RBP6.73□□□□□ -1.33
HDAC8-216ENST00000470998 WASHC4Q2M389 1173 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 CCDC57Q2TAC2 916 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 DEFB115Q30KQ5 88 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 LMBR1LQ6UX01 489 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 CCDC116Q8IYX3 515 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 MAP4K1Q92918 833 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 KCTD15Q96SI1 283 aaPredicted RBP6.73□□□□□ -1.33
HDAC8-216ENST00000470998 GDPD2Q9HCC8 539 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 PODXL2Q9NZ53 605 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 GPRC5DQ9NZD1 345 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 LIMCH1Q9UPQ0 1083 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 PA2G4Q9UQ80 394 aaKnown RBP6.73□□□□□ -1.33
HDAC8-216ENST00000470998 CYP46A1Q9Y6A2 500 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 CCDC88AQ3V6T2 1871 aa6.73□□□□□ -1.33
HDAC8-216ENST00000470998 SPEF2Q9C093 1822 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 GOLGA6L3A6NEY3 463 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 BAG4O95429 457 aaKnown RBP6.72□□□□□ -1.33
HDAC8-216ENST00000470998 BRD1O95696 1058 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 PDCP20941 246 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 RPS12P25398 132 aaKnown RBP6.72□□□□□ -1.33
HDAC8-216ENST00000470998 EPS15P42566 896 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 ECE1P42892 770 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 FOXO4P98177 505 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 NECTIN1Q15223 517 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 CCDC152Q4G0S7 254 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 MAP1SQ66K74 1059 aaPredicted RBP6.72□□□□□ -1.33
HDAC8-216ENST00000470998 CWC27Q6UX04 472 aaKnown RBP6.72□□□□□ -1.33
HDAC8-216ENST00000470998 CRIPAKQ8N1N5 446 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 KBTBD3Q8NAB2 608 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 DPF2Q92785 391 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 CELF1Q92879 486 aaKnown RBP6.72□□□□□ -1.33
HDAC8-216ENST00000470998 ZNF512BQ96KM6 892 aaPredicted RBP6.72□□□□□ -1.33
HDAC8-216ENST00000470998 TTC14Q96N46 770 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 HELLSQ9NRZ9 838 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 PGPEP1Q9NXJ5 209 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 MKRN1Q9UHC7 482 aaKnown RBP6.72□□□□□ -1.33
HDAC8-216ENST00000470998 PGAP2Q9UHJ9 254 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 DBNLQ9UJU6 430 aaKnown RBP6.72□□□□□ -1.33
HDAC8-216ENST00000470998 NSFL1CQ9UNZ2 370 aaKnown RBP6.72□□□□□ -1.33
HDAC8-216ENST00000470998 SNX14Q9Y5W7 946 aa6.72□□□□□ -1.33
HDAC8-216ENST00000470998 RTL9Q8NET4 1388 aa6.71□□□□□ -1.33
HDAC8-216ENST00000470998 CEP350Q5VT06 3117 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms