RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 CNNM2Q9H8M5 875 aa15.9■□□□□ 0.14
HDAC7-219ENST00000470668 FAM207AQ9NSI2 230 aaPredicted RBP15.9■□□□□ 0.14
HDAC7-219ENST00000470668 TMEM51Q9NW97 253 aa15.9■□□□□ 0.14
HDAC7-219ENST00000470668 TAF5LO75529 589 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 RESTQ13127 1097 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 SRLQ86TD4 932 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 FCHSD1Q86WN1 690 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 CMTR1Q8N1G2 835 aaKnown RBP15.89■□□□□ 0.13
HDAC7-219ENST00000470668 PRDM15P57071 1507 aaPredicted RBP15.89■□□□□ 0.13
HDAC7-219ENST00000470668 CCDC50Q8IVM0 306 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 IFIH1Q9BYX4 1025 aaKnown RBP15.89■□□□□ 0.13
HDAC7-219ENST00000470668 TSGA10Q9BZW7 698 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 KDM5AP29375 1690 aaKnown RBP15.89■□□□□ 0.13
HDAC7-219ENST00000470668 SBNO1A3KN83 1393 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 TMEM110-MUSTN1A8MSY1 372 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 RUFY4Q6ZNE9 571 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 HEATR3Q7Z4Q2 680 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 CACNA2D3Q8IZS8 1091 aa15.89■□□□□ 0.13
HDAC7-219ENST00000470668 N4BP2L2Q92802 583 aaPredicted RBP15.89■□□□□ 0.13
HDAC7-219ENST00000470668 ZNF594Q96JF6 807 aaPredicted RBP15.89■□□□□ 0.13
HDAC7-219ENST00000470668 SAMSN1Q9NSI8 373 aaKnown RBP15.89■□□□□ 0.13
HDAC7-219ENST00000470668 A0A1W2PQ27 194 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 A0A1W2PQ64 194 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 A0A1W2PQD8 194 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 GPAA1O43292 621 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 PDIA3P30101 505 aaKnown RBP15.88■□□□□ 0.13
HDAC7-219ENST00000470668 CETN2P41208 172 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 DTHD1Q6ZMT9 781 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 NELFBQ8WX92 580 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 KAT14Q9H8E8 782 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 TLR7Q9NYK1 1049 aaKnown RBP15.88■□□□□ 0.13
HDAC7-219ENST00000470668 RTEL1Q9NZ71 1219 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 BTBD18B2RXH4 712 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 MAP3K9P80192 1104 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 SMYD4Q8IYR2 804 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-219ENST00000470668 GRAMD1CQ8IYS0 662 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 RPGRIP1Q96KN7 1286 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 BICDL2A1A5D9 508 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 CYP7A1P22680 504 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 ARID4AP29374 1257 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-219ENST00000470668 RBL2Q08999 1139 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 TRIM68Q6AZZ1 485 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 C2CD5Q86YS7 1000 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 HAUS4Q9H6D7 363 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 SLC24A3Q9HC58 644 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 V9GY48 417 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-219ENST00000470668 TMEM232C9JQI7 657 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 PDE4DQ08499 809 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 VSTM4Q8IW00 320 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 LINC00301Q8NCQ3 95 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 IP6K1Q92551 441 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 LRRC45Q96CN5 670 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 NOX5Q96PH1 765 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 GJB4Q9NTQ9 266 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 TBX22Q9Y458 520 aa15.88■□□□□ 0.13
HDAC7-219ENST00000470668 RNMTO43148 476 aaKnown RBP15.87■□□□□ 0.13
HDAC7-219ENST00000470668 ATP11AP98196 1134 aa15.87■□□□□ 0.13
HDAC7-219ENST00000470668 NEDD9Q14511 834 aa15.87■□□□□ 0.13
HDAC7-219ENST00000470668 CFAP221Q4G0U5 840 aa15.87■□□□□ 0.13
HDAC7-219ENST00000470668 HOOK3Q86VS8 718 aa15.87■□□□□ 0.13
HDAC7-219ENST00000470668 FAM169AQ9Y6X4 670 aa15.87■□□□□ 0.13
HDAC7-219ENST00000470668 E4F1Q66K89 784 aaPredicted RBP15.87■□□□□ 0.13
HDAC7-219ENST00000470668 TCP11Q8WWU5 503 aa15.87■□□□□ 0.13
HDAC7-219ENST00000470668 NLRC4Q9NPP4 1024 aa15.87■□□□□ 0.13
HDAC7-219ENST00000470668 LRRIQ1Q96JM4 1722 aa15.87■□□□□ 0.13
HDAC7-219ENST00000470668 IKBKBO14920 756 aa15.87■□□□□ 0.13
HDAC7-219ENST00000470668 C6orf163Q5TEZ5 329 aa15.87■□□□□ 0.13
HDAC7-219ENST00000470668 IRX2Q9BZI1 471 aaPredicted RBP15.87■□□□□ 0.13
HDAC7-219ENST00000470668 GOLGA8KD6RF30 607 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 CTNNA1P35221 906 aaKnown RBP15.86■□□□□ 0.13
HDAC7-219ENST00000470668 MXRA7P84157 204 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 PIK3AP1Q6ZUJ8 805 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 ZNF274Q96GC6 653 aaPredicted RBP15.86■□□□□ 0.13
HDAC7-219ENST00000470668 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
HDAC7-219ENST00000470668 SNCBQ16143 134 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 AP1ARQ63HQ0 302 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 TOGARAM2Q6ZUX3 1019 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 INTS8Q75QN2 995 aaKnown RBP15.86■□□□□ 0.13
HDAC7-219ENST00000470668 DDX21Q9NR30 783 aaKnown RBP eCLIP15.86■□□□□ 0.13
HDAC7-219ENST00000470668 KIAA0232Q92628 1395 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 SETDB1Q15047 1291 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 VSIG1Q86XK7 387 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 KSR1Q8IVT5 923 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 CCDC51Q96ER9 411 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 IFT74Q96LB3 600 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 RASAL2Q9UJF2 1139 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 PRR36Q9H6K5 1346 aa15.86■□□□□ 0.13
HDAC7-219ENST00000470668 TRAF5O00463 557 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 BUB1O43683 1085 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 NECTIN1Q15223 517 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 CAVIN4Q5BKX8 364 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 MGARPQ8TDB4 240 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 GUCY2DQ02846 1103 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 PDCLQ13371 301 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 ARMCX5Q6P1M9 558 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 LMNTD2Q8IXW0 634 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 UHMK1Q8TAS1 419 aaKnown RBP15.85■□□□□ 0.13
HDAC7-219ENST00000470668 WDR24Q96S15 920 aa15.85■□□□□ 0.13
HDAC7-219ENST00000470668 TADA3O75528 432 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms