RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 PDE4BQ07343 736 aa7.04□□□□□ -1.28
ITGA6-209ENST00000470259 NKPD1Q17RQ9 610 aa7.04□□□□□ -1.28
ITGA6-209ENST00000470259 CDKAL1Q5VV42 579 aa7.04□□□□□ -1.28
ITGA6-209ENST00000470259 FBXO33Q7Z6M2 555 aa7.04□□□□□ -1.28
ITGA6-209ENST00000470259 RIN3Q8TB24 985 aa7.04□□□□□ -1.28
ITGA6-209ENST00000470259 MBNL3Q9NUK0 354 aaKnown RBP7.04□□□□□ -1.28
ITGA6-209ENST00000470259 CST3P01034 146 aaPredicted RBP7.03□□□□□ -1.28
ITGA6-209ENST00000470259 CTSHP09668 335 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 ITGB5P18084 799 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 ERCC3P19447 782 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 CAP2P40123 477 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 CLCN7P51798 805 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 ZP2Q05996 745 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 ZNF746Q6NUN9 644 aaPredicted RBP7.03□□□□□ -1.28
ITGA6-209ENST00000470259 RELL1Q8IUW5 271 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 MFSD4AQ8N468 514 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 PHC3Q8NDX5 983 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 CRELD1Q96HD1 420 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 DPH2Q9BQC3 489 aaPredicted RBP7.03□□□□□ -1.28
ITGA6-209ENST00000470259 PRDM7Q9NQW5 492 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 TACC3Q9Y6A5 838 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 USP31Q70CQ4 1352 aa7.03□□□□□ -1.28
ITGA6-209ENST00000470259 PRR33A8MZF0 331 aa7.02□□□□□ -1.29
ITGA6-209ENST00000470259 BPNT1O95861 308 aa7.02□□□□□ -1.29
ITGA6-209ENST00000470259 CYP7A1P22680 504 aa7.02□□□□□ -1.29
ITGA6-209ENST00000470259 RPL6Q02878 288 aaKnown RBP7.02□□□□□ -1.29
ITGA6-209ENST00000470259 SLC23A3Q6PIS1 610 aa7.02□□□□□ -1.29
ITGA6-209ENST00000470259 CDH24Q86UP0 819 aa7.02□□□□□ -1.29
ITGA6-209ENST00000470259 HSPA12BQ96MM6 686 aa7.02□□□□□ -1.29
ITGA6-209ENST00000470259 TJP2Q9UDY2 1190 aa7.02□□□□□ -1.29
ITGA6-209ENST00000470259 ADAMTS6Q9UKP5 1117 aa7.02□□□□□ -1.29
ITGA6-209ENST00000470259 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
ITGA6-209ENST00000470259 PAPLNO95428 1278 aa7.01□□□□□ -1.29
ITGA6-209ENST00000470259 GBP2P32456 591 aaPredicted RBP7.01□□□□□ -1.29
ITGA6-209ENST00000470259 SLC6A19Q695T7 634 aa7.01□□□□□ -1.29
ITGA6-209ENST00000470259 ATG4DQ86TL0 474 aaPredicted RBP7.01□□□□□ -1.29
ITGA6-209ENST00000470259 LRRN4CLQ8ND94 238 aa7.01□□□□□ -1.29
ITGA6-209ENST00000470259 TMEM87BQ96K49 555 aa7.01□□□□□ -1.29
ITGA6-209ENST00000470259 PITPNM2Q9BZ72 1349 aa7.01□□□□□ -1.29
ITGA6-209ENST00000470259 H3BS24 57 aa7□□□□□ -1.29
ITGA6-209ENST00000470259 CAMK2GQ13555 558 aaPredicted RBP7□□□□□ -1.29
ITGA6-209ENST00000470259 BNC2Q6ZN30 1099 aaPredicted RBP7□□□□□ -1.29
ITGA6-209ENST00000470259 MRPL41Q8IXM3 137 aaKnown RBP7□□□□□ -1.29
ITGA6-209ENST00000470259 MINDY4BA8MYZ0 360 aa6.99□□□□□ -1.29
ITGA6-209ENST00000470259 PF4P02776 101 aa6.99□□□□□ -1.29
ITGA6-209ENST00000470259 PLCG1P19174 1290 aa6.99□□□□□ -1.29
ITGA6-209ENST00000470259 CCDC84Q86UT8 332 aaPredicted RBP6.99□□□□□ -1.29
ITGA6-209ENST00000470259 KRTAP4-12Q9BQ66 201 aa6.99□□□□□ -1.29
ITGA6-209ENST00000470259 ATP13A1Q9HD20 1204 aa6.99□□□□□ -1.29
ITGA6-209ENST00000470259 CORINQ9Y5Q5 1042 aa6.99□□□□□ -1.29
ITGA6-209ENST00000470259 ZNF865P0CJ78 1059 aaPredicted RBP6.98□□□□□ -1.29
ITGA6-209ENST00000470259 YBX3P16989 372 aaKnown RBP eCLIP6.98□□□□□ -1.29
ITGA6-209ENST00000470259 ETV3P41162 512 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 LMNB2Q03252 620 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 FAM160A1Q05DH4 1040 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 PWP1Q13610 501 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 OGFOD2Q6N063 350 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 C22orf34Q6ZV56 151 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 MCATQ8IVS2 390 aaKnown RBP6.98□□□□□ -1.29
ITGA6-209ENST00000470259 FAM168AQ92567 244 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 TMEM74Q96NL1 305 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 BCL2L13Q9BXK5 485 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 BCL11AQ9H165 835 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 CARS2Q9HA77 564 aaKnown RBP6.98□□□□□ -1.29
ITGA6-209ENST00000470259 ZSWIM5Q9P217 1185 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 ADAM30Q9UKF2 790 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 CAPN6Q9Y6Q1 641 aa6.98□□□□□ -1.29
ITGA6-209ENST00000470259 F13A1P00488 732 aa6.97□□□□□ -1.29
ITGA6-209ENST00000470259 ZNF326Q5BKZ1 582 aaKnown RBP6.97□□□□□ -1.29
ITGA6-209ENST00000470259 SNAP47Q5SQN1 464 aa6.97□□□□□ -1.29
ITGA6-209ENST00000470259 FAM13CQ8NE31 585 aa6.97□□□□□ -1.29
ITGA6-209ENST00000470259 GATAD2BQ8WXI9 593 aa6.97□□□□□ -1.29
ITGA6-209ENST00000470259 UBE2FQ969M7 185 aa6.97□□□□□ -1.29
ITGA6-209ENST00000470259 ACSF2Q96CM8 615 aaPredicted RBP6.97□□□□□ -1.29
ITGA6-209ENST00000470259 COX4I2Q96KJ9 171 aa6.97□□□□□ -1.29
ITGA6-209ENST00000470259 RSRP1Q9BUV0 290 aa6.97□□□□□ -1.29
ITGA6-209ENST00000470259 SEMA3GQ9NS98 782 aa6.97□□□□□ -1.29
ITGA6-209ENST00000470259 LMCD1Q9NZU5 365 aa6.97□□□□□ -1.29
ITGA6-209ENST00000470259 CILPO75339 1184 aa6.96□□□□□ -1.3
ITGA6-209ENST00000470259 KIR3DL1P43629 444 aa6.96□□□□□ -1.3
ITGA6-209ENST00000470259 GIPC2Q8TF65 315 aa6.96□□□□□ -1.3
ITGA6-209ENST00000470259 ST14Q9Y5Y6 855 aa6.96□□□□□ -1.3
ITGA6-209ENST00000470259 UPK3BL1B0FP48 263 aa6.95□□□□□ -1.3
ITGA6-209ENST00000470259 UPK3BL2E5RIL1 263 aa6.95□□□□□ -1.3
ITGA6-209ENST00000470259 GRIN3BO60391 1043 aa6.95□□□□□ -1.3
ITGA6-209ENST00000470259 TNNI2P48788 182 aa6.95□□□□□ -1.3
ITGA6-209ENST00000470259 YARSP54577 528 aaKnown RBP6.95□□□□□ -1.3
ITGA6-209ENST00000470259 TNK2Q07912 1038 aa6.95□□□□□ -1.3
ITGA6-209ENST00000470259 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
ITGA6-209ENST00000470259 GOLM1Q8NBJ4 401 aa6.95□□□□□ -1.3
ITGA6-209ENST00000470259 KLHL3Q9UH77 587 aa6.95□□□□□ -1.3
ITGA6-209ENST00000470259 CEP131Q9UPN4 1083 aa6.95□□□□□ -1.3
ITGA6-209ENST00000470259 CARMIL2Q6F5E8 1435 aa6.94□□□□□ -1.3
ITGA6-209ENST00000470259 FAM221AA4D161 298 aa6.94□□□□□ -1.3
ITGA6-209ENST00000470259 RBAK-RBAKDNI3L0D1 243 aa6.94□□□□□ -1.3
ITGA6-209ENST00000470259 THAP5Q7Z6K1 395 aa6.94□□□□□ -1.3
ITGA6-209ENST00000470259 KRTAP1-3Q8IUG1 177 aa6.94□□□□□ -1.3
ITGA6-209ENST00000470259 RHOVQ96L33 236 aa6.94□□□□□ -1.3
ITGA6-209ENST00000470259 AFMP43652 599 aa6.93□□□□□ -1.3
ITGA6-209ENST00000470259 CHMP4BP1P59074 171 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms