RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 WWC3Q9ULE0 1092 aa10.77□□□□□ -0.69
NHLRC3-203ENST00000470258 A0A1B0GTH6 734 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 NEBLO76041 1014 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 MED15Q96RN5 788 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 MYD88Q99836 296 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 VPS16Q9H269 839 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 N4BP3O15049 544 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 GYPCP04921 128 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 ATP1A1P05023 1023 aaKnown RBP10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 ERVK-24P63145 666 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 LRCH2Q5VUJ6 765 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 CNPY4Q8N129 248 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 ANKRD24Q8TF21 1146 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 DSCC1Q9BVC3 393 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 NBPF3Q9H094 633 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 SAR1BQ9Y6B6 198 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 CACNA1FO60840 1977 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 AGPSO00116 658 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 PPP6R2O75170 966 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 TIMM10P62072 90 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 FKBP4Q02790 459 aaKnown RBP eCLIP10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 C2orf54Q08AI8 447 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 NEDD9Q14511 834 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 PTPAQ15257 358 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 ZNF530Q6P9A1 599 aaPredicted RBP10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 RRP36Q96EU6 259 aaKnown RBP10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 JADE2Q9NQC1 790 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 BABAM1Q9NWV8 329 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 HPS5Q9UPZ3 1129 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 MAST3O60307 1309 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 SYNRGQ9UMZ2 1314 aa10.76□□□□□ -0.69
NHLRC3-203ENST00000470258 UBE2Q2LH0YL09 131 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 ZNF185O15231 689 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 HOXC9P31274 260 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 PIP4K2AP48426 406 aaPredicted RBP10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 IMMTQ16891 758 aaKnown RBP10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 UBE3BQ7Z3V4 1068 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 CCDC82Q8N4S0 544 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 ITSN1Q15811 1721 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 SHOX2O60902 331 aaPredicted RBP10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 GPTP24298 496 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 ELF1P32519 619 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 KRT9P35527 623 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 ARHGAP25P42331 645 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 PLCD1P51178 756 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 HDGFP51858 240 aaKnown RBP10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 SATB1Q01826 763 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 CCDC122Q5T0U0 273 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 TMTC1Q8IUR5 882 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 SH2D3CQ8N5H7 860 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 PRPF38AQ8NAV1 312 aaKnown RBP10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 AIDAQ96BJ3 306 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 SEC31BQ9NQW1 1179 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 ODF2LQ9ULJ1 636 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 USP6P35125 1406 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 NCAPD2Q15021 1401 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 M0R2C6 588 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 IGKV5-2P06315 115 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 METAP2P50579 478 aaKnown RBP eCLIP10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 CDR1P51861 262 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 NFXL1Q6ZNB6 911 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 KIRREL3Q8IZU9 778 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 STAMQ92783 540 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 CHP1Q99653 195 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 MYL10Q9BUA6 226 aa10.75□□□□□ -0.69
NHLRC3-203ENST00000470258 AMPD2Q01433 879 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 CCDC70Q6NSX1 233 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 CYP26C1Q6V0L0 522 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 B4GALNT4Q76KP1 1039 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 KIAA1328Q86T90 577 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 ZKSCAN4Q969J2 545 aaPredicted RBP10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 JAKMIP2Q96AA8 810 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 VEZTQ9HBM0 779 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 HELLSQ9NRZ9 838 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 SH3TC1Q8TE82 1336 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 RNF225M0QZC1 329 aaPredicted RBP10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 MORC3Q14149 939 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 USP49Q70CQ1 688 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 SCLT1Q96NL6 688 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 CARD10Q9BWT7 1032 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 TAB2Q9NYJ8 693 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 ZC3H4Q9UPT8 1303 aaKnown RBP10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 MON2Q7Z3U7 1717 aa10.74□□□□□ -0.69
NHLRC3-203ENST00000470258 ATP2C2O75185 946 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 HOXB7P09629 217 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 PAX7P23759 505 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 SLC7A5Q01650 507 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 CEP85LQ5SZL2 805 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 ARL8AQ96BM9 186 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 PSMB7Q99436 277 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 ABHD10Q9NUJ1 306 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 ADD3Q9UEY8 706 aaKnown RBP10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 GRIN2DO15399 1336 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 ATP5J2-PTCD1G3V325 749 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 CHUKO15111 745 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 PTCD1O75127 700 aaKnown RBP10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 IFIT1P09914 478 aaKnown RBP10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 PTPN12Q05209 780 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms