RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 ORC4O43929 436 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 PDE4BQ07343 736 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 CREB3L3Q68CJ9 461 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 RGMBQ6NW40 437 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 NKX2-3Q8TAU0 364 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 HHIPL1Q96JK4 782 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMC1A-206ENST00000470241 USP26Q9BXU7 913 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 ELP3Q9H9T3 547 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 MKNK2Q9HBH9 465 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 CSADQ9Y600 493 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 TRPM7Q96QT4 1865 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 GH2P01242 217 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 PCP11498 1178 aaKnown RBP12.52□□□□□ -0.41
SMC1A-206ENST00000470241 GUCY1A2P33402 732 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 ABCB5Q2M3G0 1257 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 MFSD6Q6ZSS7 791 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 STOX1Q6ZVD7 989 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 CCDC84Q86UT8 332 aaPredicted RBP12.52□□□□□ -0.41
SMC1A-206ENST00000470241 RASAL3Q86YV0 1011 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 KCNB2Q92953 911 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 SLC10A4Q96EP9 437 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 CCDC17Q96LX7 622 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 RNF41Q9H4P4 317 aaPredicted RBP12.52□□□□□ -0.41
SMC1A-206ENST00000470241 ZNF287Q9HBT7 754 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 PICK1Q9NRD5 415 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 GINM1Q9NU53 330 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.52□□□□□ -0.41
SMC1A-206ENST00000470241 NEDD4P46934 1319 aa12.52□□□□□ -0.41
SMC1A-206ENST00000470241 LAMB1P07942 1786 aa12.51□□□□□ -0.41
SMC1A-206ENST00000470241 SPDYE5A6NIY4 337 aa12.51□□□□□ -0.41
SMC1A-206ENST00000470241 E7EWF7 191 aa12.51□□□□□ -0.41
SMC1A-206ENST00000470241 ASNSP08243 561 aa12.51□□□□□ -0.41
SMC1A-206ENST00000470241 PTPRAP18433 802 aa12.51□□□□□ -0.41
SMC1A-206ENST00000470241 HSPA4P34932 840 aa12.51□□□□□ -0.41
SMC1A-206ENST00000470241 GJA5P36382 358 aa12.51□□□□□ -0.41
SMC1A-206ENST00000470241 ZNF157P51786 506 aaPredicted RBP12.51□□□□□ -0.41
SMC1A-206ENST00000470241 FAM47AQ5JRC9 791 aa12.51□□□□□ -0.41
SMC1A-206ENST00000470241 RRP12Q5JTH9 1297 aaKnown RBP12.51□□□□□ -0.41
SMC1A-206ENST00000470241 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
SMC1A-206ENST00000470241 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
SMC1A-206ENST00000470241 IGKV6D-41A0A0C4DH26 115 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 FAM155AB1AL88 458 aaPredicted RBP12.5□□□□□ -0.41
SMC1A-206ENST00000470241 MPHOSPH10O00566 681 aaKnown RBP12.5□□□□□ -0.41
SMC1A-206ENST00000470241 RANBP6O60518 1105 aaKnown RBP12.5□□□□□ -0.41
SMC1A-206ENST00000470241 EIF5BO60841 1220 aaKnown RBP12.5□□□□□ -0.41
SMC1A-206ENST00000470241 SLC10A3P09131 477 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 TFAP4Q01664 338 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 PPATQ06203 517 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 SEPT2Q15019 361 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 DEFB115Q30KQ5 88 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 RNF20Q5VTR2 975 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 CYP4F22Q6NT55 531 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 TMEM179Q6ZVK1 233 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 ERO1BQ86YB8 467 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 NEDD1Q8NHV4 660 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 OPTNQ96CV9 577 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 WNK4Q96J92 1243 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 CABP5Q9NP86 173 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 TOMM22Q9NS69 142 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 ZHX2Q9Y6X8 837 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 OTOFQ9HC10 1997 aa12.5□□□□□ -0.41
SMC1A-206ENST00000470241 PLIN4Q96Q06 1357 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 USP17L5A8MUK1 530 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 B4E1Z4 1266 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 PPIL2Q13356 520 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 TSGA10IPQ3SY00 556 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 SPRYD7Q5W111 196 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 CLEC10AQ8IUN9 316 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 SIAH1Q8IUQ4 282 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 CCDC102AQ96A19 550 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 AFG3L2Q9Y4W6 797 aa12.49□□□□□ -0.41
SMC1A-206ENST00000470241 TSPY2A6NKD2 308 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 IRF6O14896 467 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 KDM4AO75164 1064 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 NT5C2P49902 561 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
SMC1A-206ENST00000470241 COL9A3Q14050 684 aaPredicted RBP12.48□□□□□ -0.41
SMC1A-206ENST00000470241 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
SMC1A-206ENST00000470241 ESR2Q92731 530 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 CEP95Q96GE4 821 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 CAPNS2Q96L46 248 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 WDR18Q9BV38 432 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 KRT23Q9C075 422 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 CNNM2Q9H8M5 875 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 ZSWIM5Q9P217 1185 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 KCNH4Q9UQ05 1017 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 SNX14Q9Y5W7 946 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
SMC1A-206ENST00000470241 A0A1W2PRG0 241 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 NMT2O60551 498 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 ZBTB48P10074 688 aaPredicted RBP12.47□□□□□ -0.41
SMC1A-206ENST00000470241 ZKSCAN1P17029 563 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms