RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 MYH2Q9UKX2 1941 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 LDHCP07864 332 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 CNGA1P29973 690 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 BTDP43251 543 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 ATN1P54259 1190 aaPredicted RBP11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 BACE1P56817 501 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 RTP1P59025 263 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 HERVK_113P62684 666 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 CCNA1P78396 465 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 ATP2B3Q16720 1220 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 ERICH6BQ5W0A0 696 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 GPR142Q7Z601 462 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 ARRDC4Q8NCT1 418 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 LPAR1Q92633 364 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 USP6NLQ92738 828 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 WDR18Q9BV38 432 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 DDX4Q9NQI0 724 aaKnown RBP11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 ABCF2Q9UG63 623 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 HERC5Q9UII4 1024 aaKnown RBP11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 ZBED9Q6R2W3 1325 aa11.03□□□□□ -0.64
SYNGAP1-205ENST00000470232 DNM1LO00429 736 aa11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 ERVK-9P63128 1117 aa11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 ERVK-24P63145 666 aa11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 IRX6P78412 446 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 GSTO1P78417 241 aa11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 ATP2B2Q01814 1243 aa11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 MORN1Q5T089 497 aa11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 GINM1Q9NU53 330 aa11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 DDX20Q9UHI6 824 aaKnown RBP11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 ATP11BQ9Y2G3 1177 aa11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 PLXNB2O15031 1838 aa11.02□□□□□ -0.65
SYNGAP1-205ENST00000470232 MUC3AQ02505 3323 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 LOC285556D6RIA3 1793 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 GPR75-ASB3A0A0A6YYF3 556 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP17L10C9JJH3 530 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 ASNSP08243 561 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 SLURP2P0DP57 97 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 PLA2G5P39877 138 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 MAP2K5Q13163 448 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 CCL14Q16627 93 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 ERICH6Q7L0X2 663 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 TTYH1Q9H313 450 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 PRDM5Q9NQX1 630 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 RBPJLQ9UBG7 517 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 TTC28Q96AY4 2481 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 MROH7-TTC4A0A0A0MT08 1334 aa11.01□□□□□ -0.65
SYNGAP1-205ENST00000470232 KBTBD13C9JR72 458 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 CIAO1O76071 339 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 PHKA1P46020 1223 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 MTMR2Q13614 643 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 Q3C1V9 767 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 C9orf50Q5SZB4 431 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 SLC39A5Q6ZMH5 540 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 BADQ92934 168 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 PAGR1Q9BTK6 254 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 TRIM34Q9BYJ4 488 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 TXNRD2Q9NNW7 524 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 PI4KBQ9UBF8 816 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 IVNS1ABPQ9Y6Y0 642 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 PDS5AQ29RF7 1337 aaKnown RBP11□□□□□ -0.65
SYNGAP1-205ENST00000470232 RFX7Q2KHR2 1363 aa11□□□□□ -0.65
SYNGAP1-205ENST00000470232 SLC15A5A6NIM6 579 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 FAM196BA6NMK8 535 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 IL15P40933 162 aaPredicted RBP10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 RHBDL3P58872 404 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 CCDC102BQ68D86 513 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 ATG9AQ7Z3C6 839 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 ATXN2LQ8WWM7 1075 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 NOL10Q9BSC4 688 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 PORCNQ9H237 461 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 DHX36Q9H2U1 1008 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 PPP4R2Q9NY27 417 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 HDAC5Q9UQL6 1122 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 RABGAP1Q9Y3P9 1069 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 CDH23Q9H251 3354 aa10.99□□□□□ -0.65
SYNGAP1-205ENST00000470232 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 RFX5P48382 616 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 WDR78Q5VTH9 848 aa10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 FOXP4Q8IVH2 680 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 RNPC3Q96LT9 517 aaKnown RBP10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 GAS2L1Q99501 681 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP44Q9H0E7 712 aa10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 SIL1Q9H173 461 aa10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 TACC3Q9Y6A5 838 aa10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 MAST2Q6P0Q8 1798 aa10.98□□□□□ -0.65
SYNGAP1-205ENST00000470232 PTPREP23469 700 aa10.97□□□□□ -0.65
SYNGAP1-205ENST00000470232 MECOMQ03112 1051 aa10.97□□□□□ -0.65
SYNGAP1-205ENST00000470232 GJC2Q5T442 439 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-205ENST00000470232 TEX11Q8IYF3 940 aa10.97□□□□□ -0.65
SYNGAP1-205ENST00000470232 CRACR2BQ8N4Y2 399 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-205ENST00000470232 AKAP2Q9Y2D5 859 aa10.97□□□□□ -0.65
SYNGAP1-205ENST00000470232 RBM19Q9Y4C8 960 aaKnown RBP10.97□□□□□ -0.65
SYNGAP1-205ENST00000470232 PTPRCP08575 1304 aa10.97□□□□□ -0.65
SYNGAP1-205ENST00000470232 ATAD5Q96QE3 1844 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms