RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 EXOC5O00471 708 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 FANCGO15287 622 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 POLR2DO15514 142 aaKnown RBP15.64■□□□□ 0.09
BRCA1-209ENST00000470026 NTSR2O95665 410 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 FUT2Q10981 343 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 NR5A1Q13285 461 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 SPECC1Q5M775 1068 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 ZKSCAN3Q9BRR0 538 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 CACNA1SQ13698 1873 aa15.63■□□□□ 0.09
BRCA1-209ENST00000470026 DUOX1Q9NRD9 1551 aa15.63■□□□□ 0.09
BRCA1-209ENST00000470026 ERCC5P28715 1186 aaPredicted RBP15.63■□□□□ 0.09
BRCA1-209ENST00000470026 IGHMBP2P38935 993 aaKnown RBP15.63■□□□□ 0.09
BRCA1-209ENST00000470026 RRP12Q5JTH9 1297 aaKnown RBP15.63■□□□□ 0.09
BRCA1-209ENST00000470026 OXER1Q8TDS5 423 aa15.63■□□□□ 0.09
BRCA1-209ENST00000470026 SMARCE1Q969G3 411 aa15.63■□□□□ 0.09
BRCA1-209ENST00000470026 SRRTQ9BXP5 876 aaKnown RBP15.63■□□□□ 0.09
BRCA1-209ENST00000470026 CCDC87Q9NVE4 849 aa15.63■□□□□ 0.09
BRCA1-209ENST00000470026 AATFQ9NY61 560 aaKnown RBP eCLIP15.63■□□□□ 0.09
BRCA1-209ENST00000470026 COL16A1Q07092 1604 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-209ENST00000470026 ZSCAN12O43309 604 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 STX10O60499 249 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 KIF20AO95235 890 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 FGRP09769 529 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 PKN1Q16512 942 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 SH3RF1Q7Z6J0 888 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 LRRN4CLQ8ND94 238 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 NFE2L3Q9Y4A8 694 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 COL4A1P02462 1669 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 CHRNDQ07001 517 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 SPECC1LQ69YQ0 1117 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 ADGRA1Q86SQ6 560 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 KRT222Q8N1A0 295 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 TC2NQ8N9U0 490 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 RIOK1Q9BRS2 568 aaKnown RBP15.62■□□□□ 0.09
BRCA1-209ENST00000470026 PHF20Q9BVI0 1012 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 ZNF446Q9NWS9 450 aa15.62■□□□□ 0.09
BRCA1-209ENST00000470026 VWA3AA6NCI4 1184 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 PLCD1P51178 756 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 ERCC6LQ2NKX8 1250 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 HOMER1Q86YM7 354 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 NUTM2AQ8IVF1 878 aaPredicted RBP15.61■□□□□ 0.09
BRCA1-209ENST00000470026 ESR2Q92731 530 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 SYTL4Q96C24 671 aaPredicted RBP15.61■□□□□ 0.09
BRCA1-209ENST00000470026 UBAC1Q9BSL1 405 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 CSRNP2Q9H175 543 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 LRP2BPQ9P2M1 347 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 DNAI1Q9UI46 699 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 PPP2R2CQ9Y2T4 447 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 TNKSO95271 1327 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 GOLGA6L9A6NEM1 432 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 PRPF3O43395 683 aaKnown RBP15.61■□□□□ 0.09
BRCA1-209ENST00000470026 COL1A1P02452 1464 aaPredicted RBP15.61■□□□□ 0.09
BRCA1-209ENST00000470026 CYP7A1P22680 504 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 NR1I3Q14994 352 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 MIGA1Q8NAN2 632 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 CABP5Q9NP86 173 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 PARP3Q9Y6F1 533 aa15.61■□□□□ 0.09
BRCA1-209ENST00000470026 A0A1B0GTH6 734 aa15.6■□□□□ 0.09
BRCA1-209ENST00000470026 PCP11498 1178 aaKnown RBP15.6■□□□□ 0.09
BRCA1-209ENST00000470026 CRKLP46109 303 aaKnown RBP15.6■□□□□ 0.09
BRCA1-209ENST00000470026 GOLGA8FQ08AF8 430 aa15.6■□□□□ 0.09
BRCA1-209ENST00000470026 GOLGA8DPQ0D2H9 430 aa15.6■□□□□ 0.09
BRCA1-209ENST00000470026 USP49Q70CQ1 688 aa15.6■□□□□ 0.09
BRCA1-209ENST00000470026 APTXQ7Z2E3 356 aaKnown RBP15.6■□□□□ 0.09
BRCA1-209ENST00000470026 CMTR1Q8N1G2 835 aaKnown RBP15.6■□□□□ 0.09
BRCA1-209ENST00000470026 CDC5LQ99459 802 aaKnown RBP15.6■□□□□ 0.09
BRCA1-209ENST00000470026 BAG1Q99933 345 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-209ENST00000470026 TOMM22Q9NS69 142 aa15.6■□□□□ 0.09
BRCA1-209ENST00000470026 MYH14Q7Z406 1995 aaKnown RBP15.6■□□□□ 0.09
BRCA1-209ENST00000470026 MAGEB6P1A0A0J9YX57 407 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 TRIM75PA6NK02 468 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 BMP15O95972 392 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 ENAHQ8N8S7 591 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-209ENST00000470026 NUP133Q8WUM0 1156 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 TNFRSF25Q93038 417 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 BRIP1Q9BX63 1249 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 TAOK2Q9UL54 1235 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 SCN7AQ01118 1682 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 TADA3O75528 432 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 SLFN14P0C7P3 912 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 XBP1P17861 261 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 ZNF827Q17R98 1081 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 GRAMD1CQ8IYS0 662 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 CCDC82Q8N4S0 544 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 SDR42E1Q8WUS8 393 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 ZSCAN10Q96SZ4 725 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-209ENST00000470026 RBM28Q9NW13 759 aaKnown RBP15.59■□□□□ 0.09
BRCA1-209ENST00000470026 KAT6BQ8WYB5 2073 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 MYH2Q9UKX2 1941 aa15.59■□□□□ 0.09
BRCA1-209ENST00000470026 A0A087X0B3 334 aa15.58■□□□□ 0.08
BRCA1-209ENST00000470026 CUL4BQ13620 913 aa15.58■□□□□ 0.08
BRCA1-209ENST00000470026 NPY5RQ15761 445 aa15.58■□□□□ 0.08
BRCA1-209ENST00000470026 EARS2Q5JPH6 523 aaKnown RBP15.58■□□□□ 0.08
BRCA1-209ENST00000470026 FERMT2Q96AC1 680 aa15.58■□□□□ 0.08
BRCA1-209ENST00000470026 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
BRCA1-209ENST00000470026 RAI14Q9P0K7 980 aa15.58■□□□□ 0.08
BRCA1-209ENST00000470026 EFCAB8A8MWE9 144 aa15.58■□□□□ 0.08
BRCA1-209ENST00000470026 KRT2P35908 639 aa15.58■□□□□ 0.08
BRCA1-209ENST00000470026 PBX1P40424 430 aa15.58■□□□□ 0.08
BRCA1-209ENST00000470026 TROAPQ12815 778 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms