RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 PSEN1P49768 467 aa11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 ZNF75DP51815 510 aa11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 CCDC144BQ3MJ40 725 aa11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 CCDC181Q5TID7 509 aa11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 CCDC144CPQ8IYA2 1237 aa11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 CACTINQ8WUQ7 758 aaKnown RBP11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 IDH1O75874 414 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 LDHBP07195 334 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 PAX3P23760 479 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 FKBP1AP62942 108 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 LARP1BQ659C4 914 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 GPC2Q8N158 579 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 BICD2Q8TD16 824 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 KCNB2Q92953 911 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 SH2B1Q9NRF2 756 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 RAI14Q9P0K7 980 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 TTC36A6NLP5 189 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 DDNO94850 711 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 KRT85P78386 507 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 DPY19L2Q6NUT2 758 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 KIAA0825Q8IV33 1275 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 WDR70Q9NW82 654 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 CYP46A1Q9Y6A2 500 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 MYH2Q9UKX2 1941 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 MYO3BQ8WXR4 1341 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 NECTIN1Q15223 517 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 SYCP1Q15431 976 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 HSP90AA4PQ58FG1 418 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 ZSCAN31Q96LW9 406 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 TM6SF1Q9BZW5 370 aa11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 DDX41Q9UJV9 622 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-215ENST00000469653 ELP1O95163 1332 aa11.52□□□□□ -0.56
SEMA4D-215ENST00000469653 KBTBD3Q8NAB2 608 aa11.52□□□□□ -0.56
SEMA4D-215ENST00000469653 AGBL3Q8NEM8 1001 aa11.52□□□□□ -0.56
SEMA4D-215ENST00000469653 TNMDQ9H2S6 317 aa11.52□□□□□ -0.56
SEMA4D-215ENST00000469653 TTF2Q9UNY4 1162 aaKnown RBP11.52□□□□□ -0.56
SEMA4D-215ENST00000469653 GMPSP49915 693 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-215ENST00000469653 RBM43Q6ZSC3 357 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-215ENST00000469653 GMLQ99445 158 aa11.52□□□□□ -0.57
SEMA4D-215ENST00000469653 SUGT1Q9Y2Z0 365 aa11.52□□□□□ -0.57
SEMA4D-215ENST00000469653 MECOMQ03112 1051 aa11.52□□□□□ -0.57
SEMA4D-215ENST00000469653 MAP3K12Q12852 859 aa11.52□□□□□ -0.57
SEMA4D-215ENST00000469653 DZIP1Q86YF9 867 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-215ENST00000469653 BANK1Q8NDB2 785 aa11.52□□□□□ -0.57
SEMA4D-215ENST00000469653 TAF6LQ9Y6J9 622 aa11.52□□□□□ -0.57
SEMA4D-215ENST00000469653 NR1I2O75469 434 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 SCNN1DP51172 638 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 ARID5BQ14865 1188 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 DNAJC25Q9H1X3 360 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 MAST2Q6P0Q8 1798 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 ADAMTSL1Q8N6G6 1762 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 ANKRD62A6NC57 917 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 GLTPD2A6NH11 291 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 USP27XA6NNY8 438 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 SLFN14P0C7P3 912 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 SLC9C2Q5TAH2 1124 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 MAGEB6Q8N7X4 407 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 RETREG2Q8NC44 543 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 SHTN1A0MZ66 631 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 CHGBP05060 677 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 USP17L8P0C7I0 530 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 ZNF384Q8TF68 577 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 NSUN4Q96CB9 384 aaKnown RBP11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 PGBD1Q96JS3 809 aa11.51□□□□□ -0.57
SEMA4D-215ENST00000469653 DIXDC1Q155Q3 683 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 TPD52L1Q16890 204 aaPredicted RBP11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 SLFNL1Q499Z3 407 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 CREB3L3Q68CJ9 461 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 CLSTN2Q9H4D0 955 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 RBM8AQ9Y5S9 174 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 ZNF165P49910 485 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 NAA16Q6N069 864 aaPredicted RBP11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 CCAR2Q8N163 923 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 OGFOD1Q8N543 542 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 CCDC112Q8NEF3 446 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 DPF2Q92785 391 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 CLIP2Q9UDT6 1046 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 CNOT7Q9UIV1 285 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 MORC2Q9Y6X9 1032 aaPredicted RBP11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 CCDC171Q6TFL3 1326 aa11.5□□□□□ -0.57
SEMA4D-215ENST00000469653 PDE6AP16499 860 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 DNAJC14Q6Y2X3 702 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 MICALL2Q8IY33 904 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 SPATA32Q96LK8 384 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 FAM227BQ96M60 508 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 HDAC9Q9UKV0 1011 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 PAXBP1Q9Y5B6 917 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 MAST3O60307 1309 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 IRF5Q13568 498 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 NBPF11Q86T75 865 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 ZNF532Q9HCE3 1301 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 RNF113AO15541 343 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 CYP7A1P22680 504 aa11.49□□□□□ -0.57
SEMA4D-215ENST00000469653 ADD2P35612 726 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms