RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 USP17L5A8MUK1 530 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 M0R2C6 588 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 GPAA1O43292 621 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 CYP2D6P10635 497 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 GNAT2P19087 354 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 SHMT1P34896 483 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 JAG1P78504 1218 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 EVX2Q03828 476 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 SPP2Q13103 211 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 SHROOM1Q2M3G4 852 aaPredicted RBP11.68□□□□□ -0.54
SRRT-208ENST00000469602 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 GIMAP6Q6P9H5 292 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 FASTKD5Q7L8L6 764 aaKnown RBP11.68□□□□□ -0.54
SRRT-208ENST00000469602 TICAM2Q86XR7 235 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 AMOTL1Q8IY63 956 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 WDR18Q9BV38 432 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 AS3MTQ9HBK9 375 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 ZFYVE28Q9HCC9 887 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 ZBTB21Q9ULJ3 1066 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 HTTP42858 3142 aa11.68□□□□□ -0.54
SRRT-208ENST00000469602 GSG1L2A8MUP6 293 aa11.67□□□□□ -0.54
SRRT-208ENST00000469602 USP17L12C9JPN9 530 aa11.67□□□□□ -0.54
SRRT-208ENST00000469602 USP17L21D6R901 530 aa11.67□□□□□ -0.54
SRRT-208ENST00000469602 PDHXO00330 501 aa11.67□□□□□ -0.54
SRRT-208ENST00000469602 FKTNO75072 461 aa11.67□□□□□ -0.54
SRRT-208ENST00000469602 GH2P01242 217 aa11.67□□□□□ -0.54
SRRT-208ENST00000469602 CERKLQ49MI3 558 aaPredicted RBP11.67□□□□□ -0.54
SRRT-208ENST00000469602 C12orf60Q5U649 245 aa11.67□□□□□ -0.54
SRRT-208ENST00000469602 GPAT2Q6NUI2 795 aa11.67□□□□□ -0.54
SRRT-208ENST00000469602 CTR9Q6PD62 1173 aa11.67□□□□□ -0.54
SRRT-208ENST00000469602 SEC62Q99442 399 aaKnown RBP11.67□□□□□ -0.54
SRRT-208ENST00000469602 ARPP21Q9UBL0 812 aaPredicted RBP11.67□□□□□ -0.54
SRRT-208ENST00000469602 SWAP70Q9UH65 585 aa11.67□□□□□ -0.54
SRRT-208ENST00000469602 CYP2D7A0A087X1C5 515 aa11.66□□□□□ -0.54
SRRT-208ENST00000469602 TRIM6-TRIM34B2RNG4 842 aa11.66□□□□□ -0.54
SRRT-208ENST00000469602 TLR2O60603 784 aa11.66□□□□□ -0.54
SRRT-208ENST00000469602 ABCB5Q2M3G0 1257 aa11.66□□□□□ -0.54
SRRT-208ENST00000469602 GADL1Q6ZQY3 521 aa11.66□□□□□ -0.54
SRRT-208ENST00000469602 CTU1Q7Z7A3 348 aaKnown RBP11.66□□□□□ -0.54
SRRT-208ENST00000469602 PROCA1Q8NCQ7 364 aaPredicted RBP11.66□□□□□ -0.54
SRRT-208ENST00000469602 SLC45A1Q9Y2W3 748 aa11.66□□□□□ -0.54
SRRT-208ENST00000469602 CENPFP49454 3210 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 PATL2C9JE40 543 aaKnown RBP11.65□□□□□ -0.54
SRRT-208ENST00000469602 SMIM22K7EJ46 135 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 APPP05067 770 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 PDE4AP27815 886 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 TDO2P48775 406 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 HMGCS2P54868 508 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 BACE1P56817 501 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 DGKZQ13574 1117 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 MTMR2Q13614 643 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 RAB3GAP1Q15042 981 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 SBK1Q52WX2 424 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 SH3D19Q5HYK7 790 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 SLC44A5Q8NCS7 719 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 RILPL2Q969X0 211 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 DYNLL2Q96FJ2 89 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 PARK7Q99497 189 aaKnown RBP11.65□□□□□ -0.54
SRRT-208ENST00000469602 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 MCOLN1Q9GZU1 580 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 EPB41L4AQ9HCS5 686 aaPredicted RBP11.65□□□□□ -0.54
SRRT-208ENST00000469602 CABP5Q9NP86 173 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 AGTPBP1Q9UPW5 1226 aa11.65□□□□□ -0.54
SRRT-208ENST00000469602 ADGRA2Q96PE1 1338 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 C19orf81C9J6K1 198 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 USP17L10C9JJH3 530 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 CYP2C8P10632 490 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 CDK8P49336 464 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 SP3Q02447 781 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 TREML2Q5T2D2 321 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 CCDC129Q6ZRS4 1044 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 IFNL3Q8IZI9 196 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 ERO1AQ96HE7 468 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 HELLSQ9NRZ9 838 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 ROBO3Q96MS0 1386 aa11.64□□□□□ -0.55
SRRT-208ENST00000469602 GREB1LQ9C091 1923 aaPredicted RBP11.63□□□□□ -0.55
SRRT-208ENST00000469602 A0A0D9SFI3 127 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 MINDY4BA8MYZ0 360 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 MPHOSPH10O00566 681 aaKnown RBP11.63□□□□□ -0.55
SRRT-208ENST00000469602 GUCY1A2P33402 732 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 SEPT2Q15019 361 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 PKN2Q16513 984 aaKnown RBP11.63□□□□□ -0.55
SRRT-208ENST00000469602 MCMDC2Q4G0Z9 681 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 C17orf99Q6UX52 265 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 TMEM179Q6ZVK1 233 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 CD99L2Q8TCZ2 262 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 FAM227BQ96M60 508 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 FEZ1Q99689 392 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 TMOD4Q9NZQ9 345 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 PNMA3Q9UL41 463 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 MGAMO43451 1857 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 ZSWIM8A7E2V4 1837 aa11.63□□□□□ -0.55
SRRT-208ENST00000469602 FOXP2O15409 715 aa11.62□□□□□ -0.55
SRRT-208ENST00000469602 AKR1B1P15121 316 aa11.62□□□□□ -0.55
SRRT-208ENST00000469602 SDSP20132 328 aa11.62□□□□□ -0.55
SRRT-208ENST00000469602 NMIQ13287 307 aaPredicted RBP11.62□□□□□ -0.55
SRRT-208ENST00000469602 PABPC4Q13310 644 aaKnown RBP eCLIP11.62□□□□□ -0.551e-6■□□□□ 9.7
SRRT-208ENST00000469602 TTC22Q5TAA0 569 aa11.62□□□□□ -0.55
SRRT-208ENST00000469602 IFFO2Q5TF58 517 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms