RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 POLR3DP05423 398 aaPredicted RBP22.07■■□□□ 1.12
PHGDH-204ENST00000469443 BCRP11274 1271 aa22.07■■□□□ 1.12
PHGDH-204ENST00000469443 HMGCS2P54868 508 aa22.07■■□□□ 1.12
PHGDH-204ENST00000469443 MLLT1Q03111 559 aaPredicted RBP22.07■■□□□ 1.12
PHGDH-204ENST00000469443 SHROOM1Q2M3G4 852 aaPredicted RBP22.07■■□□□ 1.12
PHGDH-204ENST00000469443 SH3D19Q5HYK7 790 aa22.07■■□□□ 1.12
PHGDH-204ENST00000469443 TREML2Q5T2D2 321 aa22.07■■□□□ 1.12
PHGDH-204ENST00000469443 TATDN1Q6P1N9 297 aa22.07■■□□□ 1.12
PHGDH-204ENST00000469443 SDR42E1Q8WUS8 393 aa22.07■■□□□ 1.12
PHGDH-204ENST00000469443 ARMT1Q9H993 441 aa22.07■■□□□ 1.12
PHGDH-204ENST00000469443 MCM9Q9NXL9 1143 aa22.07■■□□□ 1.12
PHGDH-204ENST00000469443 CENPFP49454 3210 aa22.07■■□□□ 1.12
PHGDH-204ENST00000469443 DOCK3Q8IZD9 2030 aa22.06■■□□□ 1.12
PHGDH-204ENST00000469443 MBD4O95243 580 aa22.06■■□□□ 1.12
PHGDH-204ENST00000469443 PLCD1P51178 756 aa22.06■■□□□ 1.12
PHGDH-204ENST00000469443 DCP1AQ9NPI6 582 aaPredicted RBP22.06■■□□□ 1.12
PHGDH-204ENST00000469443 PNMA3Q9UL41 463 aa22.06■■□□□ 1.12
PHGDH-204ENST00000469443 KIAA0100Q14667 2235 aaKnown RBP22.05■■□□□ 1.12
PHGDH-204ENST00000469443 CHGBP05060 677 aa22.05■■□□□ 1.12
PHGDH-204ENST00000469443 PSMC4P43686 418 aa22.05■■□□□ 1.12
PHGDH-204ENST00000469443 PRMT2P55345 433 aa22.05■■□□□ 1.12
PHGDH-204ENST00000469443 BACE1P56817 501 aa22.05■■□□□ 1.12
PHGDH-204ENST00000469443 TSHZ3Q63HK5 1081 aa22.05■■□□□ 1.12
PHGDH-204ENST00000469443 SMCR8Q8TEV9 937 aaPredicted RBP22.05■■□□□ 1.12
PHGDH-204ENST00000469443 GH2P01242 217 aa22.04■■□□□ 1.12
PHGDH-204ENST00000469443 CTGFP29279 349 aa22.04■■□□□ 1.12
PHGDH-204ENST00000469443 PABPC4Q13310 644 aaKnown RBP eCLIP22.04■■□□□ 1.12
PHGDH-204ENST00000469443 MTMR2Q13614 643 aa22.04■■□□□ 1.12
PHGDH-204ENST00000469443 KBTBD3Q8NAB2 608 aa22.04■■□□□ 1.12
PHGDH-204ENST00000469443 ARMC5Q96C12 935 aa22.04■■□□□ 1.12
PHGDH-204ENST00000469443 ATP8A2Q9NTI2 1148 aa22.04■■□□□ 1.12
PHGDH-204ENST00000469443 PTCH2Q9Y6C5 1203 aa22.04■■□□□ 1.12
PHGDH-204ENST00000469443 TTC41PQ6P2S7 1318 aa22.04■■□□□ 1.12
PHGDH-204ENST00000469443 C19orf81C9J6K1 198 aa22.03■■□□□ 1.12
PHGDH-204ENST00000469443 USP17L10C9JJH3 530 aa22.03■■□□□ 1.12
PHGDH-204ENST00000469443 ECM2O94769 699 aaPredicted RBP22.03■■□□□ 1.12
PHGDH-204ENST00000469443 SHMT1P34896 483 aa22.03■■□□□ 1.12
PHGDH-204ENST00000469443 GABPAQ06546 454 aa22.03■■□□□ 1.12
PHGDH-204ENST00000469443 AAMPQ13685 434 aa22.03■■□□□ 1.12
PHGDH-204ENST00000469443 CERKLQ49MI3 558 aaPredicted RBP22.03■■□□□ 1.12
PHGDH-204ENST00000469443 TRIM47Q96LD4 638 aa22.03■■□□□ 1.12
PHGDH-204ENST00000469443 PRKAB2O43741 272 aa22.02■■□□□ 1.12
PHGDH-204ENST00000469443 FMNL1O95466 1100 aaPredicted RBP22.02■■□□□ 1.12
PHGDH-204ENST00000469443 HDAC1Q13547 482 aaPredicted RBP22.02■■□□□ 1.12
PHGDH-204ENST00000469443 PUS7LQ9H0K6 701 aaKnown RBP22.02■■□□□ 1.12
PHGDH-204ENST00000469443 TMOD4Q9NZQ9 345 aa22.02■■□□□ 1.12
PHGDH-204ENST00000469443 ERC2O15083 957 aa22.01■■□□□ 1.11
PHGDH-204ENST00000469443 OSBPP22059 807 aa22.01■■□□□ 1.11
PHGDH-204ENST00000469443 HOXD10P28358 340 aa22.01■■□□□ 1.11
PHGDH-204ENST00000469443 EVX2Q03828 476 aa22.01■■□□□ 1.11
PHGDH-204ENST00000469443 ABCB5Q2M3G0 1257 aa22.01■■□□□ 1.11
PHGDH-204ENST00000469443 SLC9C1Q4G0N8 1177 aa22.01■■□□□ 1.11
PHGDH-204ENST00000469443 GCC1Q96CN9 775 aa22.01■■□□□ 1.11
PHGDH-204ENST00000469443 CABP5Q9NP86 173 aa22.01■■□□□ 1.11
PHGDH-204ENST00000469443 ZBTB47Q9UFB7 747 aaPredicted RBP22.01■■□□□ 1.11
PHGDH-204ENST00000469443 SRRDQ9UH36 339 aa22.01■■□□□ 1.11
PHGDH-204ENST00000469443 TAOK2Q9UL54 1235 aa22.01■■□□□ 1.11
PHGDH-204ENST00000469443 TNRC18O15417 2968 aaPredicted RBP22■■□□□ 1.11
PHGDH-204ENST00000469443 CYP2D6P10635 497 aa22■■□□□ 1.11
PHGDH-204ENST00000469443 FCGRTP55899 365 aa22■■□□□ 1.11
PHGDH-204ENST00000469443 NBPF11Q86T75 865 aa22■■□□□ 1.11
PHGDH-204ENST00000469443 PI4K2BQ8TCG2 481 aa22■■□□□ 1.11
PHGDH-204ENST00000469443 OTUD7AQ8TE49 926 aaPredicted RBP22■■□□□ 1.11
PHGDH-204ENST00000469443 ASCC2Q9H1I8 757 aaPredicted RBP22■■□□□ 1.11
PHGDH-204ENST00000469443 SLC4A4Q9Y6R1 1079 aa22■■□□□ 1.11
PHGDH-204ENST00000469443 GLRX3O76003 335 aaKnown RBP21.99■■□□□ 1.11
PHGDH-204ENST00000469443 ZFYP08048 801 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-204ENST00000469443 MX1P20591 662 aa21.99■■□□□ 1.11
PHGDH-204ENST00000469443 HOXA7P31268 230 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-204ENST00000469443 GCLCP48506 637 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-204ENST00000469443 RAB3GAP1Q15042 981 aa21.99■■□□□ 1.11
PHGDH-204ENST00000469443 ANKRD45Q5TZF3 282 aa21.99■■□□□ 1.11
PHGDH-204ENST00000469443 USP17L2Q6R6M4 530 aa21.99■■□□□ 1.11
PHGDH-204ENST00000469443 DDRGK1Q96HY6 314 aa21.99■■□□□ 1.11
PHGDH-204ENST00000469443 RNF113AO15541 343 aaKnown RBP21.98■■□□□ 1.11
PHGDH-204ENST00000469443 IRX3P78415 501 aaPredicted RBP21.98■■□□□ 1.11
PHGDH-204ENST00000469443 FAM110CQ1W6H9 321 aa21.98■■□□□ 1.11
PHGDH-204ENST00000469443 AMOTL1Q8IY63 956 aa21.98■■□□□ 1.11
PHGDH-204ENST00000469443 ANKRD13CQ8N6S4 541 aa21.98■■□□□ 1.11
PHGDH-204ENST00000469443 APPBP2Q92624 585 aa21.98■■□□□ 1.11
PHGDH-204ENST00000469443 ZNF333Q96JL9 665 aa21.98■■□□□ 1.11
PHGDH-204ENST00000469443 SWAP70Q9UH65 585 aa21.98■■□□□ 1.11
PHGDH-204ENST00000469443 MYPNQ86TC9 1320 aa21.98■■□□□ 1.11
PHGDH-204ENST00000469443 PDE4DIPQ5VU43 2346 aa21.97■■□□□ 1.11
PHGDH-204ENST00000469443 GUCY1A2P33402 732 aa21.97■■□□□ 1.11
PHGDH-204ENST00000469443 LRRFIP1Q32MZ4 808 aaKnown RBP21.97■■□□□ 1.11
PHGDH-204ENST00000469443 C12orf60Q5U649 245 aa21.97■■□□□ 1.11
PHGDH-204ENST00000469443 STRBPQ96SI9 672 aaKnown RBP21.97■■□□□ 1.11
PHGDH-204ENST00000469443 FEZ1Q99689 392 aa21.97■■□□□ 1.11
PHGDH-204ENST00000469443 EMILIN3Q9NT22 766 aa21.97■■□□□ 1.11
PHGDH-204ENST00000469443 SALL3Q9BXA9 1300 aa21.97■■□□□ 1.11
PHGDH-204ENST00000469443 USP17L12C9JPN9 530 aa21.96■■□□□ 1.11
PHGDH-204ENST00000469443 USP17L21D6R901 530 aa21.96■■□□□ 1.11
PHGDH-204ENST00000469443 SLC44A5Q8NCS7 719 aa21.96■■□□□ 1.11
PHGDH-204ENST00000469443 RAET1EQ8TD07 263 aa21.96■■□□□ 1.11
PHGDH-204ENST00000469443 OSBP2Q969R2 916 aa21.96■■□□□ 1.11
PHGDH-204ENST00000469443 DYNLL2Q96FJ2 89 aa21.96■■□□□ 1.11
PHGDH-204ENST00000469443 C12orf42Q96LP6 360 aa21.96■■□□□ 1.11
PHGDH-204ENST00000469443 USP14P54578 494 aa21.95■■□□□ 1.1
PHGDH-204ENST00000469443 PRKCZQ05513 592 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms