RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.04■□□□□ -0
HDAC3-204ENST00000469207 DHX36Q9H2U1 1008 aaKnown RBP15.04■□□□□ -0
HDAC3-204ENST00000469207 AS3MTQ9HBK9 375 aa15.04■□□□□ -0
HDAC3-204ENST00000469207 DBNLQ9UJU6 430 aaKnown RBP15.04■□□□□ -0
HDAC3-204ENST00000469207 NR2E3Q9Y5X4 410 aa15.04■□□□□ -0
HDAC3-204ENST00000469207 COL2A1P02458 1487 aaPredicted RBP15.03■□□□□ -0
HDAC3-204ENST00000469207 EVI5O60447 810 aa15.03■□□□□ -0
HDAC3-204ENST00000469207 CYP7A1P22680 504 aa15.03■□□□□ -0
HDAC3-204ENST00000469207 PABPC4Q13310 644 aaKnown RBP eCLIP15.03■□□□□ -06e-8■■■□□ 17.1
HDAC3-204ENST00000469207 METTL16Q86W50 562 aaKnown RBP15.03■□□□□ -0
HDAC3-204ENST00000469207 CRACR2BQ8N4Y2 399 aaPredicted RBP15.03■□□□□ -0
HDAC3-204ENST00000469207 ANTXR1Q9H6X2 564 aa15.03■□□□□ -0
HDAC3-204ENST00000469207 RBPJLQ9UBG7 517 aa15.03■□□□□ -0
HDAC3-204ENST00000469207 STAP2Q9UGK3 403 aa15.03■□□□□ -0
HDAC3-204ENST00000469207 ASNSP08243 561 aa15.02■□□□□ -0
HDAC3-204ENST00000469207 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
HDAC3-204ENST00000469207 TRIB2Q92519 343 aa15.02■□□□□ -0
HDAC3-204ENST00000469207 TBC1D2Q9BYX2 928 aa15.02■□□□□ -0
HDAC3-204ENST00000469207 EMILIN3Q9NT22 766 aa15.02■□□□□ -0
HDAC3-204ENST00000469207 TMOD4Q9NZQ9 345 aa15.02■□□□□ -0
HDAC3-204ENST00000469207 NOP58Q9Y2X3 529 aaKnown RBP15.02■□□□□ -0
HDAC3-204ENST00000469207 LOC285556D6RIA3 1793 aa15.01□□□□□ -0.01
HDAC3-204ENST00000469207 USP17L10C9JJH3 530 aa15.01□□□□□ -0.01
HDAC3-204ENST00000469207 IDH1O75874 414 aaKnown RBP15.01□□□□□ -0.01
HDAC3-204ENST00000469207 HMGCRP04035 888 aa15.01□□□□□ -0.01
HDAC3-204ENST00000469207 PLCG2P16885 1265 aa15.01□□□□□ -0.01
HDAC3-204ENST00000469207 HOXA7P31268 230 aaPredicted RBP15.01□□□□□ -0.01
HDAC3-204ENST00000469207 HERVK_113P62684 666 aa15.01□□□□□ -0.01
HDAC3-204ENST00000469207 IRX3P78415 501 aaPredicted RBP15.01□□□□□ -0.01
HDAC3-204ENST00000469207 ITPRIPQ8IWB1 547 aa15.01□□□□□ -0.01
HDAC3-204ENST00000469207 MAGEB6Q8N7X4 407 aa15.01□□□□□ -0.01
HDAC3-204ENST00000469207 ZNF512BQ96KM6 892 aaPredicted RBP15.01□□□□□ -0.01
HDAC3-204ENST00000469207 TRIM34Q9BYJ4 488 aa15.01□□□□□ -0.01
HDAC3-204ENST00000469207 MORF4L1Q9UBU8 362 aa15.01□□□□□ -0.01
HDAC3-204ENST00000469207 ZBTB21Q9ULJ3 1066 aa15.01□□□□□ -0.01
HDAC3-204ENST00000469207 RPTORQ8N122 1335 aa15□□□□□ -0.01
HDAC3-204ENST00000469207 CDK5RAP2Q96SN8 1893 aa15□□□□□ -0.01
HDAC3-204ENST00000469207 SOX1O00570 391 aaPredicted RBP15□□□□□ -0.01
HDAC3-204ENST00000469207 GH2P01242 217 aa15□□□□□ -0.01
HDAC3-204ENST00000469207 ZYXQ15942 572 aaKnown RBP15□□□□□ -0.01
HDAC3-204ENST00000469207 NECAB2Q7Z6G3 386 aa15□□□□□ -0.01
HDAC3-204ENST00000469207 GPRC5AQ8NFJ5 357 aa15□□□□□ -0.01
HDAC3-204ENST00000469207 PAGR1Q9BTK6 254 aa15□□□□□ -0.01
HDAC3-204ENST00000469207 PORCNQ9H237 461 aa15□□□□□ -0.01
HDAC3-204ENST00000469207 HMX1Q9NP08 348 aaPredicted RBP15□□□□□ -0.01
HDAC3-204ENST00000469207 EXOC6BQ9Y2D4 811 aa15□□□□□ -0.01
HDAC3-204ENST00000469207 PLXNB2O15031 1838 aa14.99□□□□□ -0.01
HDAC3-204ENST00000469207 C19orf81C9J6K1 198 aa14.99□□□□□ -0.01
HDAC3-204ENST00000469207 HNRNPUQ00839 825 aaKnown RBP eCLIP14.99□□□□□ -0.01
HDAC3-204ENST00000469207 EVX2Q03828 476 aa14.99□□□□□ -0.01
HDAC3-204ENST00000469207 CCL14Q16627 93 aa14.99□□□□□ -0.01
HDAC3-204ENST00000469207 FTSJ3Q8IY81 847 aaKnown RBP14.99□□□□□ -0.01
HDAC3-204ENST00000469207 C7orf61Q8IZ16 206 aa14.99□□□□□ -0.01
HDAC3-204ENST00000469207 BCL11AQ9H165 835 aa14.99□□□□□ -0.01
HDAC3-204ENST00000469207 ZMYND8Q9ULU4 1186 aaPredicted RBP14.99□□□□□ -0.01
HDAC3-204ENST00000469207 ALPK3Q96L96 1907 aa14.98□□□□□ -0.01
HDAC3-204ENST00000469207 HLA-DOAP06340 250 aa14.98□□□□□ -0.01
HDAC3-204ENST00000469207 SYN1P17600 705 aa14.98□□□□□ -0.01
HDAC3-204ENST00000469207 USP5P45974 858 aa14.98□□□□□ -0.01
HDAC3-204ENST00000469207 PANK1Q8TE04 598 aa14.98□□□□□ -0.01
HDAC3-204ENST00000469207 LRCH3Q96II8 777 aa14.98□□□□□ -0.01
HDAC3-204ENST00000469207 NUDT12Q9BQG2 462 aa14.98□□□□□ -0.01
HDAC3-204ENST00000469207 CNMDO75829 334 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 PRKAR2AP13861 404 aaKnown RBP14.97□□□□□ -0.01
HDAC3-204ENST00000469207 CCND3P30281 292 aaPredicted RBP14.97□□□□□ -0.01
HDAC3-204ENST00000469207 PLCD1P51178 756 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 ERVK-9P63128 1117 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 ERVK-24P63145 666 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 CACNB2Q08289 660 aaPredicted RBP14.97□□□□□ -0.01
HDAC3-204ENST00000469207 RAB3GAP1Q15042 981 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 MAP3K21Q5TCX8 1036 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 TATDN1Q6P1N9 297 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 CEP85Q6P2H3 762 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 USP17L2Q6R6M4 530 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 MIER1Q8N108 512 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 ACER1Q8TDN7 264 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 USP6NLQ92738 828 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 IL1RAPL2Q9NP60 686 aa14.97□□□□□ -0.01
HDAC3-204ENST00000469207 GPR142Q7Z601 462 aa14.96□□□□□ -0.01
HDAC3-204ENST00000469207 AACSQ86V21 672 aa14.96□□□□□ -0.01
HDAC3-204ENST00000469207 NBPF3Q9H094 633 aa14.96□□□□□ -0.01
HDAC3-204ENST00000469207 OGDHLQ9ULD0 1010 aa14.96□□□□□ -0.01
HDAC3-204ENST00000469207 FOCADQ5VW36 1801 aa14.95□□□□□ -0.02
HDAC3-204ENST00000469207 APBB1O00213 710 aa14.95□□□□□ -0.02
HDAC3-204ENST00000469207 SLFNL1Q499Z3 407 aa14.95□□□□□ -0.02
HDAC3-204ENST00000469207 CERKLQ49MI3 558 aaPredicted RBP14.95□□□□□ -0.02
HDAC3-204ENST00000469207 MORN1Q5T089 497 aa14.95□□□□□ -0.02
HDAC3-204ENST00000469207 CCAR1Q8IX12 1150 aaKnown RBP14.95□□□□□ -0.02
HDAC3-204ENST00000469207 ANKLE1Q8NAG6 615 aa14.95□□□□□ -0.02
HDAC3-204ENST00000469207 C11orf49Q9H6J7 331 aa14.95□□□□□ -0.02
HDAC3-204ENST00000469207 GINM1Q9NU53 330 aa14.95□□□□□ -0.02
HDAC3-204ENST00000469207 SERPINB13Q9UIV8 391 aa14.95□□□□□ -0.02
HDAC3-204ENST00000469207 MAST2Q6P0Q8 1798 aa14.95□□□□□ -0.02
HDAC3-204ENST00000469207 LAMA3Q16787 3333 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 MYH1P12882 1939 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 XRCC5P13010 732 aaKnown RBP14.94□□□□□ -0.02
HDAC3-204ENST00000469207 MAPK4P31152 587 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 GUCY1A2P33402 732 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 SHMT1P34896 483 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 ABCB5Q2M3G0 1257 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms