RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 GIMAP6Q6P9H5 292 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 ISCA1Q9BUE6 129 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 TSPYL2Q9H2G4 693 aaPredicted RBP11.29□□□□□ -0.6
NUP50-214ENST00000469163 BCS1LQ9Y276 419 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 CYP2D7A0A087X1C5 515 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 RBM47A0AV96 593 aaKnown RBP11.28□□□□□ -0.6
NUP50-214ENST00000469163 PRKAB2O43741 272 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 DIXDC1Q155Q3 683 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 ADCK5Q3MIX3 580 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 IQCA1Q86XH1 822 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 COL23A1Q86Y22 540 aaPredicted RBP11.28□□□□□ -0.6
NUP50-214ENST00000469163 FAM107BQ9H098 131 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 ATP10DQ9P241 1426 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 CDKL5O76039 1030 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 PDE8BO95263 885 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 SETDB1Q15047 1291 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 TXNRD3Q86VQ6 643 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 MYL10Q9BUA6 226 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 ACBD3Q9H3P7 528 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 ZDHHC9Q9Y397 364 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 CCDC171Q6TFL3 1326 aa11.28□□□□□ -0.6
NUP50-214ENST00000469163 BCL9LQ86UU0 1499 aa11.27□□□□□ -0.6
NUP50-214ENST00000469163 MBD4O95243 580 aa11.27□□□□□ -0.6
NUP50-214ENST00000469163 GTF2IP78347 998 aa11.27□□□□□ -0.6
NUP50-214ENST00000469163 TCP10Q12799 353 aa11.27□□□□□ -0.6
NUP50-214ENST00000469163 POLA2Q14181 598 aa11.27□□□□□ -0.6
NUP50-214ENST00000469163 ATG9AQ7Z3C6 839 aa11.27□□□□□ -0.6
NUP50-214ENST00000469163 SPDL1Q96EA4 605 aa11.27□□□□□ -0.6
NUP50-214ENST00000469163 ZC3H12CQ9C0D7 883 aaKnown RBP11.27□□□□□ -0.6
NUP50-214ENST00000469163 MCM8Q9UJA3 840 aa11.27□□□□□ -0.6
NUP50-214ENST00000469163 NCAPD2Q15021 1401 aa11.27□□□□□ -0.6
NUP50-214ENST00000469163 PHACTR2O75167 634 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 TPP2P29144 1249 aaPredicted RBP11.27□□□□□ -0.61
NUP50-214ENST00000469163 CACNB3P54284 484 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 EIF6P56537 245 aaKnown RBP11.27□□□□□ -0.61
NUP50-214ENST00000469163 PARP10Q53GL7 1025 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 BLOC1S2Q6QNY1 142 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 PI4K2BQ8TCG2 481 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 USP26Q9BXU7 913 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 NAPBQ9H115 298 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 NARFQ9UHQ1 456 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 PHLPP1O60346 1717 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 hCG_1642624A0A1W2PR95 340 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 PECAM1P16284 738 aaPredicted RBP11.27□□□□□ -0.61
NUP50-214ENST00000469163 MAGEA8P43361 318 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 MCM6Q14566 821 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 KIAA0825Q8IV33 1275 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 CMTR1Q8N1G2 835 aaKnown RBP11.27□□□□□ -0.61
NUP50-214ENST00000469163 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
NUP50-214ENST00000469163 BRF1Q92994 677 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 CABS1Q96KC9 395 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.27□□□□□ -0.61
NUP50-214ENST00000469163 ARFGAP3Q9NP61 516 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 COPRSQ9NQ92 184 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
NUP50-214ENST00000469163 LMCD1Q9NZU5 365 aa11.27□□□□□ -0.61
NUP50-214ENST00000469163 CPLX1O14810 134 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 USP5P45974 858 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 CTDSPL2Q05D32 466 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 MAP3K12Q12852 859 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 INF2Q27J81 1249 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 DRAXINQ8NBI3 349 aaPredicted RBP11.26□□□□□ -0.61
NUP50-214ENST00000469163 YIPF2Q9BWQ6 316 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.26□□□□□ -0.61
NUP50-214ENST00000469163 CYP46A1Q9Y6A2 500 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 CRYBG1Q9Y4K1 1723 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 SGSM2O43147 1006 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 TBC1D8O95759 1140 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 MCAMP43121 646 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 PUM3Q15397 648 aaKnown RBP11.26□□□□□ -0.61
NUP50-214ENST00000469163 CACTINQ8WUQ7 758 aaKnown RBP11.26□□□□□ -0.61
NUP50-214ENST00000469163 EPC1Q9H2F5 836 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 NCOA5Q9HCD5 579 aaKnown RBP11.26□□□□□ -0.61
NUP50-214ENST00000469163 SLC4A4Q9Y6R1 1079 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 ZNF532Q9HCE3 1301 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 NEFHP12036 1026 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 PRKG1Q13976 671 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 AKNAD1Q5T1N1 836 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 MICU3Q86XE3 530 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 C2CD5Q86YS7 1000 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 SAAL1Q96ER3 474 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 NYXQ9GZU5 481 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 PUS7LQ9H0K6 701 aaKnown RBP11.26□□□□□ -0.61
NUP50-214ENST00000469163 BLOC1S6Q9UL45 172 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 PCDHGA4Q9Y5G9 962 aa11.26□□□□□ -0.61
NUP50-214ENST00000469163 SLIT3O75094 1523 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 DYNLL1P63167 89 aaKnown RBP11.25□□□□□ -0.61
NUP50-214ENST00000469163 RASGRF1Q13972 1273 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 DBN1Q16643 649 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 LRP10Q7Z4F1 713 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 H3BQV1 296 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 COL9A3Q14050 684 aaPredicted RBP11.25□□□□□ -0.61
NUP50-214ENST00000469163 IFFO2Q5TF58 517 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 FAM173BQ6P4H8 233 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 GET4Q7L5D6 327 aaPredicted RBP11.25□□□□□ -0.61
NUP50-214ENST00000469163 SPATA5Q8NB90 893 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 GJA3Q9Y6H8 435 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 CAPN7Q9Y6W3 813 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms