RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 PRKAB2O43741 272 aa15.18■□□□□ 0.02
ABCF1-204ENST00000468958 SPP2Q13103 211 aa15.18■□□□□ 0.02
ABCF1-204ENST00000468958 TMED8Q6PL24 325 aaPredicted RBP15.18■□□□□ 0.02
ABCF1-204ENST00000468958 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
ABCF1-204ENST00000468958 FOXP4Q8IVH2 680 aaPredicted RBP15.18■□□□□ 0.02
ABCF1-204ENST00000468958 ECHDC1Q9NTX5 307 aa15.18■□□□□ 0.02
ABCF1-204ENST00000468958 PTPN22Q9Y2R2 807 aa15.18■□□□□ 0.02
ABCF1-204ENST00000468958 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
ABCF1-204ENST00000468958 CYP2D6P10635 497 aa15.17■□□□□ 0.02
ABCF1-204ENST00000468958 BCRP11274 1271 aa15.17■□□□□ 0.02
ABCF1-204ENST00000468958 RGS19P49795 217 aa15.17■□□□□ 0.02
ABCF1-204ENST00000468958 LACTBP83111 547 aaPredicted RBP15.17■□□□□ 0.02
ABCF1-204ENST00000468958 ZNF280CQ8ND82 737 aa15.17■□□□□ 0.02
ABCF1-204ENST00000468958 EFCC1Q9HA90 598 aa15.17■□□□□ 0.02
ABCF1-204ENST00000468958 PARP14Q460N5 1801 aa15.17■□□□□ 0.02
ABCF1-204ENST00000468958 TNRC18O15417 2968 aaPredicted RBP15.16■□□□□ 0.02
ABCF1-204ENST00000468958 GREB1LQ9C091 1923 aaPredicted RBP15.16■□□□□ 0.02
ABCF1-204ENST00000468958 USP17L5A8MUK1 530 aa15.16■□□□□ 0.02
ABCF1-204ENST00000468958 MBD4O95243 580 aa15.16■□□□□ 0.02
ABCF1-204ENST00000468958 HLA-DOAP06340 250 aa15.16■□□□□ 0.02
ABCF1-204ENST00000468958 SHMT1P34896 483 aa15.16■□□□□ 0.02
ABCF1-204ENST00000468958 HMGCS2P54868 508 aa15.16■□□□□ 0.02
ABCF1-204ENST00000468958 GABPAQ06546 454 aa15.16■□□□□ 0.02
ABCF1-204ENST00000468958 TATDN1Q6P1N9 297 aa15.16■□□□□ 0.02
ABCF1-204ENST00000468958 SMC5Q8IY18 1101 aa15.16■□□□□ 0.02
ABCF1-204ENST00000468958 CRACR2BQ8N4Y2 399 aaPredicted RBP15.16■□□□□ 0.02
ABCF1-204ENST00000468958 PI4K2BQ8TCG2 481 aa15.16■□□□□ 0.02
ABCF1-204ENST00000468958 PUS7LQ9H0K6 701 aaKnown RBP15.16■□□□□ 0.02
ABCF1-204ENST00000468958 DCP1AQ9NPI6 582 aaPredicted RBP15.16■□□□□ 0.02
ABCF1-204ENST00000468958 ZBTB21Q9ULJ3 1066 aa15.16■□□□□ 0.02
ABCF1-204ENST00000468958 RLFQ13129 1914 aa15.15■□□□□ 0.02
ABCF1-204ENST00000468958 ERC2O15083 957 aa15.15■□□□□ 0.02
ABCF1-204ENST00000468958 SH3D19Q5HYK7 790 aa15.15■□□□□ 0.02
ABCF1-204ENST00000468958 ANKRD45Q5TZF3 282 aa15.15■□□□□ 0.02
ABCF1-204ENST00000468958 FASTKD5Q7L8L6 764 aaKnown RBP15.15■□□□□ 0.02
ABCF1-204ENST00000468958 CERS3Q8IU89 383 aa15.15■□□□□ 0.02
ABCF1-204ENST00000468958 EHD4Q9H223 541 aa15.15■□□□□ 0.02
ABCF1-204ENST00000468958 SERPINB13Q9UIV8 391 aa15.15■□□□□ 0.02
ABCF1-204ENST00000468958 AGTPBP1Q9UPW5 1226 aa15.15■□□□□ 0.02
ABCF1-204ENST00000468958 PTCH2Q9Y6C5 1203 aa15.15■□□□□ 0.02
ABCF1-204ENST00000468958 TTC41PQ6P2S7 1318 aa15.15■□□□□ 0.02
ABCF1-204ENST00000468958 CYP2D7A0A087X1C5 515 aa15.14■□□□□ 0.01
ABCF1-204ENST00000468958 GUCY1A2P33402 732 aa15.14■□□□□ 0.01
ABCF1-204ENST00000468958 MTMR2Q13614 643 aa15.14■□□□□ 0.01
ABCF1-204ENST00000468958 UBE3CQ15386 1083 aa15.14■□□□□ 0.01
ABCF1-204ENST00000468958 SLC44A5Q8NCS7 719 aa15.14■□□□□ 0.01
ABCF1-204ENST00000468958 TRIM47Q96LD4 638 aa15.14■□□□□ 0.01
ABCF1-204ENST00000468958 PARK7Q99497 189 aaKnown RBP15.14■□□□□ 0.01
ABCF1-204ENST00000468958 WDR18Q9BV38 432 aa15.14■□□□□ 0.01
ABCF1-204ENST00000468958 CRNKL1Q9BZJ0 848 aaKnown RBP15.14■□□□□ 0.01
ABCF1-204ENST00000468958 SLC45A1Q9Y2W3 748 aa15.14■□□□□ 0.01
ABCF1-204ENST00000468958 GH2P01242 217 aa15.13■□□□□ 0.01
ABCF1-204ENST00000468958 ASNSP08243 561 aa15.13■□□□□ 0.01
ABCF1-204ENST00000468958 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
ABCF1-204ENST00000468958 PROCA1Q8NCQ7 364 aaPredicted RBP15.13■□□□□ 0.01
ABCF1-204ENST00000468958 DYNLL2Q96FJ2 89 aa15.13■□□□□ 0.01
ABCF1-204ENST00000468958 MCM9Q9NXL9 1143 aa15.13■□□□□ 0.01
ABCF1-204ENST00000468958 PEX10O60683 326 aa15.12■□□□□ 0.01
ABCF1-204ENST00000468958 POLR3DP05423 398 aaPredicted RBP15.12■□□□□ 0.01
ABCF1-204ENST00000468958 BACE1P56817 501 aa15.12■□□□□ 0.01
ABCF1-204ENST00000468958 LRRFIP1Q32MZ4 808 aaKnown RBP15.12■□□□□ 0.01
ABCF1-204ENST00000468958 TTC6Q86TZ1 520 aa15.12■□□□□ 0.01
ABCF1-204ENST00000468958 OSBP2Q969R2 916 aa15.12■□□□□ 0.01
ABCF1-204ENST00000468958 TRIM34Q9BYJ4 488 aa15.12■□□□□ 0.01
ABCF1-204ENST00000468958 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
ABCF1-204ENST00000468958 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.12■□□□□ 0.01
ABCF1-204ENST00000468958 AS3MTQ9HBK9 375 aa15.12■□□□□ 0.01
ABCF1-204ENST00000468958 POTEFA5A3E0 1075 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 M0R2C6 588 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 GLRX3O76003 335 aaKnown RBP15.11■□□□□ 0.01
ABCF1-204ENST00000468958 IGHDP01880 384 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 MX1P20591 662 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 OSBPP22059 807 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 PSMC4P43686 418 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 NUCB1Q02818 461 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 CERKLQ49MI3 558 aaPredicted RBP15.11■□□□□ 0.01
ABCF1-204ENST00000468958 POTEEQ6S8J3 1075 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 CENPQQ7L2Z9 268 aaPredicted RBP15.11■□□□□ 0.01
ABCF1-204ENST00000468958 CHD1LQ86WJ1 897 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 ACER1Q8TDN7 264 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 EMILIN3Q9NT22 766 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 A0A0G2JMZ2 1700 aa15.11■□□□□ 0.01
ABCF1-204ENST00000468958 COL11A1P12107 1806 aaPredicted RBP15.1■□□□□ 0.01
ABCF1-204ENST00000468958 MYH4Q9Y623 1939 aa15.1■□□□□ 0.01
ABCF1-204ENST00000468958 USP17L10C9JJH3 530 aa15.1■□□□□ 0.01
ABCF1-204ENST00000468958 ARMC5Q96C12 935 aa15.1■□□□□ 0.01
ABCF1-204ENST00000468958 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
ABCF1-204ENST00000468958 STRBPQ96SI9 672 aaKnown RBP15.1■□□□□ 0.01
ABCF1-204ENST00000468958 SEC62Q99442 399 aaKnown RBP15.1■□□□□ 0.01
ABCF1-204ENST00000468958 ASCC2Q9H1I8 757 aaPredicted RBP15.1■□□□□ 0.01
ABCF1-204ENST00000468958 GABRQQ9UN88 632 aa15.1■□□□□ 0.01
ABCF1-204ENST00000468958 SLC4A4Q9Y6R1 1079 aa15.1■□□□□ 0.01
ABCF1-204ENST00000468958 USP17L12C9JPN9 530 aa15.09■□□□□ 0.01
ABCF1-204ENST00000468958 USP17L21D6R901 530 aa15.09■□□□□ 0.01
ABCF1-204ENST00000468958 RNF113AO15541 343 aaKnown RBP15.09■□□□□ 0.01
ABCF1-204ENST00000468958 SEPT2Q15019 361 aa15.09■□□□□ 0.01
ABCF1-204ENST00000468958 RAB3GAP1Q15042 981 aa15.09■□□□□ 0.01
ABCF1-204ENST00000468958 ZYXQ15942 572 aaKnown RBP15.09■□□□□ 0.01
ABCF1-204ENST00000468958 ABCB5Q2M3G0 1257 aa15.09■□□□□ 0.01
ABCF1-204ENST00000468958 C12orf60Q5U649 245 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms