RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 LIG3P49916 1009 aa8.26□□□□□ -1.09
LSM5-209ENST00000468872 ETF1P62495 437 aaKnown RBP8.26□□□□□ -1.09
LSM5-209ENST00000468872 FANCCQ00597 558 aa8.26□□□□□ -1.09
LSM5-209ENST00000468872 NKG7Q16617 165 aa8.26□□□□□ -1.09
LSM5-209ENST00000468872 LCE3BQ5TA77 95 aa8.26□□□□□ -1.09
LSM5-209ENST00000468872 C9orf131Q5VYM1 1079 aa8.26□□□□□ -1.09
LSM5-209ENST00000468872 METTL16Q86W50 562 aaKnown RBP8.26□□□□□ -1.09
LSM5-209ENST00000468872 SPACA3Q8IXA5 215 aa8.26□□□□□ -1.09
LSM5-209ENST00000468872 FOXQ1Q9C009 403 aa8.26□□□□□ -1.09
LSM5-209ENST00000468872 PRDM5Q9NQX1 630 aaPredicted RBP8.26□□□□□ -1.09
LSM5-209ENST00000468872 CAP2P40123 477 aa8.25□□□□□ -1.09
LSM5-209ENST00000468872 NKPD1Q17RQ9 610 aa8.25□□□□□ -1.09
LSM5-209ENST00000468872 KRTAP1-3Q8IUG1 177 aa8.25□□□□□ -1.09
LSM5-209ENST00000468872 ASIC4Q96FT7 647 aa8.25□□□□□ -1.09
LSM5-209ENST00000468872 MBNL3Q9NUK0 354 aaKnown RBP8.25□□□□□ -1.09
LSM5-209ENST00000468872 ADAMTS6Q9UKP5 1117 aa8.25□□□□□ -1.09
LSM5-209ENST00000468872 MAPK8IP1Q9UQF2 711 aa8.25□□□□□ -1.09
LSM5-209ENST00000468872 GNAT3A8MTJ3 354 aa8.24□□□□□ -1.09
LSM5-209ENST00000468872 GFRA2O00451 464 aa8.24□□□□□ -1.09
LSM5-209ENST00000468872 PAPLNO95428 1278 aa8.24□□□□□ -1.09
LSM5-209ENST00000468872 RNASE1P07998 156 aaKnown RBP8.24□□□□□ -1.09
LSM5-209ENST00000468872 GRK4P32298 578 aa8.24□□□□□ -1.09
LSM5-209ENST00000468872 HID1Q8IV36 788 aa8.24□□□□□ -1.09
LSM5-209ENST00000468872 METTL5Q9NRN9 209 aaKnown RBP8.24□□□□□ -1.09
LSM5-209ENST00000468872 ZNF76P36508 570 aa8.23□□□□□ -1.09
LSM5-209ENST00000468872 ST13P50502 369 aaKnown RBP8.23□□□□□ -1.09
LSM5-209ENST00000468872 TAF1CQ15572 869 aaPredicted RBP8.23□□□□□ -1.09
LSM5-209ENST00000468872 ANGEL2Q5VTE6 544 aaKnown RBP8.23□□□□□ -1.09
LSM5-209ENST00000468872 MFSD2AQ8NA29 543 aa8.23□□□□□ -1.09
LSM5-209ENST00000468872 PI4K2BQ8TCG2 481 aa8.23□□□□□ -1.09
LSM5-209ENST00000468872 ASB11Q8WXH4 323 aa8.23□□□□□ -1.09
LSM5-209ENST00000468872 MIPEPQ99797 713 aa8.23□□□□□ -1.09
LSM5-209ENST00000468872 MIR1-1HGQ9H1L0 117 aa8.23□□□□□ -1.09
LSM5-209ENST00000468872 RC3H2Q9HBD1 1191 aaKnown RBP8.23□□□□□ -1.09
LSM5-209ENST00000468872 USP31Q70CQ4 1352 aa8.22□□□□□ -1.09
LSM5-209ENST00000468872 RLBP1P12271 317 aa8.22□□□□□ -1.09
LSM5-209ENST00000468872 TFE3P19532 575 aaPredicted RBP8.22□□□□□ -1.09
LSM5-209ENST00000468872 CLCN7P51798 805 aa8.22□□□□□ -1.09
LSM5-209ENST00000468872 RAD51AP2Q09MP3 1159 aa8.22□□□□□ -1.09
LSM5-209ENST00000468872 RNF34Q969K3 372 aa8.22□□□□□ -1.09
LSM5-209ENST00000468872 NOC4LQ9BVI4 516 aaKnown RBP8.22□□□□□ -1.09
LSM5-209ENST00000468872 TPX2Q9ULW0 747 aaKnown RBP8.22□□□□□ -1.09
LSM5-209ENST00000468872 TACC3Q9Y6A5 838 aa8.22□□□□□ -1.09
LSM5-209ENST00000468872 CNTNAP4Q9C0A0 1308 aa8.22□□□□□ -1.09
LSM5-209ENST00000468872 BIN1O00499 593 aa8.21□□□□□ -1.1
LSM5-209ENST00000468872 ERCC5P28715 1186 aaPredicted RBP8.21□□□□□ -1.1
LSM5-209ENST00000468872 PRAMEF13Q5VWM6 474 aa8.21□□□□□ -1.1
LSM5-209ENST00000468872 NT5DC4Q86YG4 428 aa8.21□□□□□ -1.1
LSM5-209ENST00000468872 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.1
LSM5-209ENST00000468872 RIN3Q8TB24 985 aa8.21□□□□□ -1.1
LSM5-209ENST00000468872 TLR6Q9Y2C9 796 aa8.21□□□□□ -1.1
LSM5-209ENST00000468872 PRR33A8MZF0 331 aa8.2□□□□□ -1.1
LSM5-209ENST00000468872 CST3P01034 146 aaPredicted RBP8.2□□□□□ -1.1
LSM5-209ENST00000468872 IKZF1Q13422 519 aa8.2□□□□□ -1.1
LSM5-209ENST00000468872 OGFOD2Q6N063 350 aa8.2□□□□□ -1.1
LSM5-209ENST00000468872 LETMD1Q6P1Q0 360 aa8.2□□□□□ -1.1
LSM5-209ENST00000468872 SLC23A3Q6PIS1 610 aa8.2□□□□□ -1.1
LSM5-209ENST00000468872 ATG4DQ86TL0 474 aaPredicted RBP8.2□□□□□ -1.1
LSM5-209ENST00000468872 PITPNM2Q9BZ72 1349 aa8.2□□□□□ -1.1
LSM5-209ENST00000468872 SFRP5Q5T4F7 317 aa8.19□□□□□ -1.1
LSM5-209ENST00000468872 C22orf34Q6ZV56 151 aa8.19□□□□□ -1.1
LSM5-209ENST00000468872 MFSD4AQ8N468 514 aa8.19□□□□□ -1.1
LSM5-209ENST00000468872 PHC3Q8NDX5 983 aa8.19□□□□□ -1.1
LSM5-209ENST00000468872 XAGE3Q8WTP9 111 aa8.19□□□□□ -1.1
LSM5-209ENST00000468872 JARID2Q92833 1246 aaPredicted RBP8.19□□□□□ -1.1
LSM5-209ENST00000468872 PRDM7Q9NQW5 492 aa8.19□□□□□ -1.1
LSM5-209ENST00000468872 TJP2Q9UDY2 1190 aa8.19□□□□□ -1.1
LSM5-209ENST00000468872 FAM155AB1AL88 458 aaPredicted RBP8.18□□□□□ -1.1
LSM5-209ENST00000468872 PGRP06401 933 aa8.18□□□□□ -1.1
LSM5-209ENST00000468872 ZNF865P0CJ78 1059 aaPredicted RBP8.18□□□□□ -1.1
LSM5-209ENST00000468872 RPL6Q02878 288 aaKnown RBP8.18□□□□□ -1.1
LSM5-209ENST00000468872 ZP2Q05996 745 aa8.18□□□□□ -1.1
LSM5-209ENST00000468872 ZNF746Q6NUN9 644 aaPredicted RBP8.18□□□□□ -1.1
LSM5-209ENST00000468872 MRPL41Q8IXM3 137 aaKnown RBP8.18□□□□□ -1.1
LSM5-209ENST00000468872 HSPA12BQ96MM6 686 aa8.18□□□□□ -1.1
LSM5-209ENST00000468872 C8orf37Q96NL8 207 aa8.18□□□□□ -1.1
LSM5-209ENST00000468872 YBX3P16989 372 aaKnown RBP eCLIP8.17□□□□□ -1.1
LSM5-209ENST00000468872 ZC3H6P61129 1189 aaKnown RBP8.17□□□□□ -1.1
LSM5-209ENST00000468872 DPH2Q9BQC3 489 aaPredicted RBP8.17□□□□□ -1.1
LSM5-209ENST00000468872 CAPN6Q9Y6Q1 641 aa8.17□□□□□ -1.1
LSM5-209ENST00000468872 CARMIL2Q6F5E8 1435 aa8.17□□□□□ -1.1
LSM5-209ENST00000468872 F6X3S4 739 aa8.16□□□□□ -1.1
LSM5-209ENST00000468872 IGSF3O75054 1194 aa8.16□□□□□ -1.1
LSM5-209ENST00000468872 PDE4BQ07343 736 aa8.16□□□□□ -1.1
LSM5-209ENST00000468872 CDKAL1Q5VV42 579 aa8.16□□□□□ -1.1
LSM5-209ENST00000468872 TMEM87BQ96K49 555 aa8.16□□□□□ -1.1
LSM5-209ENST00000468872 TGIF2Q9GZN2 237 aa8.16□□□□□ -1.1
LSM5-209ENST00000468872 SEMA3GQ9NS98 782 aa8.16□□□□□ -1.1
LSM5-209ENST00000468872 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.16□□□□□ -1.1
LSM5-209ENST00000468872 CBX7O95931 251 aa8.15□□□□□ -1.1
LSM5-209ENST00000468872 ZNF394Q53GI3 561 aa8.15□□□□□ -1.1
LSM5-209ENST00000468872 SLC6A19Q695T7 634 aa8.15□□□□□ -1.1
LSM5-209ENST00000468872 HS2ST1Q7LGA3 356 aa8.15□□□□□ -1.1
LSM5-209ENST00000468872 CCDC84Q86UT8 332 aaPredicted RBP8.15□□□□□ -1.1
LSM5-209ENST00000468872 MCATQ8IVS2 390 aaKnown RBP8.15□□□□□ -1.1
LSM5-209ENST00000468872 POU5F2Q8N7G0 328 aa8.15□□□□□ -1.1
LSM5-209ENST00000468872 ATP13A1Q9HD20 1204 aa8.15□□□□□ -1.1
LSM5-209ENST00000468872 GGT7Q9UJ14 662 aa8.15□□□□□ -1.1
LSM5-209ENST00000468872 ADAM30Q9UKF2 790 aa8.15□□□□□ -1.1
LSM5-209ENST00000468872 ST14Q9Y5Y6 855 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms