RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 GOLGA8AA7E2F4 631 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 FZD9O00144 591 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 BAG4O95429 457 aaKnown RBP17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 RPS12P25398 132 aaKnown RBP17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 PRELPP51888 382 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 RASSF7Q02833 373 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 NFIAQ12857 509 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 SLC4A8Q2Y0W8 1093 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 IFIT1BQ5T764 474 aaKnown RBP17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 CPLX2Q6PUV4 134 aaKnown RBP17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 DGKHQ86XP1 1220 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 ZNF654Q8IZM8 581 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 NEDD1Q8NHV4 660 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 ANP32EQ9BTT0 268 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 FHDC1Q9C0D6 1143 aaPredicted RBP17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 EHD4Q9H223 541 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 TDRD3Q9H7E2 651 aaKnown RBP17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 SWAP70Q9UH65 585 aa17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
CRAMP1-206ENST00000468839 SPDYE2BA6NHP3 402 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 CPLX1O14810 134 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 CDKL5O76039 1030 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 HLA-DOAP06340 250 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 SPDYE6P0CI01 402 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 CALM1P0DP23 149 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 CALM2P0DP24 149 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 CALM3P0DP25 149 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 CDC27P30260 824 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 ADD1P35611 737 aaKnown RBP17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 DLGAP5Q15398 846 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 NTRK3Q16288 839 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 RCSD1Q6JBY9 416 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 FAM184AQ8NB25 1140 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 SLC44A5Q8NCS7 719 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 ZBED3Q96IU2 234 aaPredicted RBP17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 IL17RBQ9NRM6 502 aa17.54■□□□□ 0.4
CRAMP1-206ENST00000468839 CCDC196A0A1B0GTZ2 297 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 DTNBO60941 627 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 F13A1P00488 732 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 FDPSP14324 419 aaKnown RBP17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 PTMSP20962 102 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 EIF6P56537 245 aaKnown RBP17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 NBR1Q14596 966 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 CATIPQ7Z7H3 387 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 MICU3Q86XE3 530 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 ZFPM1Q8IX07 1006 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 FANCBQ8NB91 859 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 DDX11Q96FC9 970 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 SERPINB13Q9UIV8 391 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 ATRNL1Q5VV63 1379 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 PLIN4Q96Q06 1357 aa17.53■□□□□ 0.4
CRAMP1-206ENST00000468839 DDX11L8A8MPP1 907 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 DDAH1O94760 285 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 TSPY3P0CV98 308 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 TSPY8P0CW00 308 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 IFNAR1P17181 557 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 NOVP48745 357 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 ZNF280AP59817 542 aaPredicted RBP17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 RTN1Q16799 776 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 RAB11FIP4Q86YS3 637 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 FOXP4Q8IVH2 680 aaPredicted RBP17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 DPF2Q92785 391 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 MAP3K14Q99558 947 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 SYT17Q9BSW7 474 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 TMOD2Q9NZR1 351 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 PI4KBQ9UBF8 816 aa17.52■□□□□ 0.4
CRAMP1-206ENST00000468839 STK36Q9NRP7 1315 aa17.51■□□□□ 0.39
CRAMP1-206ENST00000468839 TROAPQ12815 778 aa17.51■□□□□ 0.39
CRAMP1-206ENST00000468839 SPDYE2Q495Y8 402 aa17.51■□□□□ 0.39
CRAMP1-206ENST00000468839 SH3BP5LQ7L8J4 393 aa17.51■□□□□ 0.39
CRAMP1-206ENST00000468839 MYL10Q9BUA6 226 aa17.51■□□□□ 0.39
CRAMP1-206ENST00000468839 RBM28Q9NW13 759 aaKnown RBP17.51■□□□□ 0.39
CRAMP1-206ENST00000468839 ORC3Q9UBD5 711 aaPredicted RBP17.51■□□□□ 0.39
CRAMP1-206ENST00000468839 ZNF70Q9UC06 446 aaPredicted RBP17.51■□□□□ 0.39
CRAMP1-206ENST00000468839 ATP6V1DQ9Y5K8 247 aa17.51■□□□□ 0.39
CRAMP1-206ENST00000468839 DDTLA6NHG4 134 aaPredicted RBP17.5■□□□□ 0.39
CRAMP1-206ENST00000468839 NMT2O60551 498 aa17.5■□□□□ 0.39
CRAMP1-206ENST00000468839 RXRAP19793 462 aa17.5■□□□□ 0.39
CRAMP1-206ENST00000468839 SHMT1P34896 483 aa17.5■□□□□ 0.39
CRAMP1-206ENST00000468839 CACNB3P54284 484 aa17.5■□□□□ 0.39
CRAMP1-206ENST00000468839 FOXD4L5Q5VV16 416 aaPredicted RBP17.5■□□□□ 0.39
CRAMP1-206ENST00000468839 ARHGAP27Q6ZUM4 889 aa17.5■□□□□ 0.39
CRAMP1-206ENST00000468839 FOXD4L4Q8WXT5 416 aaPredicted RBP17.5■□□□□ 0.39
CRAMP1-206ENST00000468839 CCDC17Q96LX7 622 aa17.5■□□□□ 0.39
CRAMP1-206ENST00000468839 VPS37CA5D8V6 355 aaPredicted RBP17.49■□□□□ 0.39
CRAMP1-206ENST00000468839 GOLGA6L22H0YM25 854 aa17.49■□□□□ 0.39
CRAMP1-206ENST00000468839 LMNB1P20700 586 aa17.49■□□□□ 0.39
CRAMP1-206ENST00000468839 SSRP1Q08945 709 aaKnown RBP17.49■□□□□ 0.39
CRAMP1-206ENST00000468839 TCP10Q12799 353 aa17.49■□□□□ 0.39
CRAMP1-206ENST00000468839 CCDC144CPQ8IYA2 1237 aa17.49■□□□□ 0.39
CRAMP1-206ENST00000468839 NUP133Q8WUM0 1156 aa17.49■□□□□ 0.39
CRAMP1-206ENST00000468839 FAM151AQ8WW52 585 aa17.49■□□□□ 0.39
CRAMP1-206ENST00000468839 IGKV6D-41A0A0C4DH26 115 aa17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 H3BQV1 296 aa17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 FMNL1O95466 1100 aaPredicted RBP17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 IFFO2Q5TF58 517 aa17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 CDC37L1Q7L3B6 337 aa17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 NBPF11Q86T75 865 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms