RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CCDC196A0A1B0GTZ2 297 aa22.14■■□□□ 1.13
SMC4-209ENST00000468653 TRAK2O60296 914 aa22.14■■□□□ 1.13
SMC4-209ENST00000468653 FOSBP53539 338 aa22.14■■□□□ 1.13
SMC4-209ENST00000468653 CFAP100Q494V2 611 aa22.14■■□□□ 1.13
SMC4-209ENST00000468653 CCDC178Q5BJE1 867 aa22.14■■□□□ 1.13
SMC4-209ENST00000468653 OSBPL5Q9H0X9 879 aaPredicted RBP22.14■■□□□ 1.13
SMC4-209ENST00000468653 FAM217BQ9NTX9 383 aaPredicted RBP22.14■■□□□ 1.13
SMC4-209ENST00000468653 NID2Q14112 1375 aa22.13■■□□□ 1.13
SMC4-209ENST00000468653 RASA1P20936 1047 aa22.13■■□□□ 1.13
SMC4-209ENST00000468653 FERMT3Q86UX7 667 aa22.13■■□□□ 1.13
SMC4-209ENST00000468653 FANCBQ8NB91 859 aa22.13■■□□□ 1.13
SMC4-209ENST00000468653 HDAC9Q9UKV0 1011 aa22.13■■□□□ 1.13
SMC4-209ENST00000468653 NFKBIEO00221 500 aa22.12■■□□□ 1.13
SMC4-209ENST00000468653 NFIAQ12857 509 aa22.12■■□□□ 1.13
SMC4-209ENST00000468653 PSME4Q14997 1843 aa22.12■■□□□ 1.13
SMC4-209ENST00000468653 PRPF40AO75400 957 aaKnown RBP22.12■■□□□ 1.13
SMC4-209ENST00000468653 HLA-DOAP06340 250 aa22.12■■□□□ 1.13
SMC4-209ENST00000468653 CALM1P0DP23 149 aa22.12■■□□□ 1.13
SMC4-209ENST00000468653 CALM2P0DP24 149 aa22.12■■□□□ 1.13
SMC4-209ENST00000468653 CALM3P0DP25 149 aa22.12■■□□□ 1.13
SMC4-209ENST00000468653 PPP2R5BQ15173 497 aa22.12■■□□□ 1.13
SMC4-209ENST00000468653 SKOR2Q2VWA4 1001 aaPredicted RBP22.12■■□□□ 1.13
SMC4-209ENST00000468653 OGFOD1Q8N543 542 aa22.12■■□□□ 1.13
SMC4-209ENST00000468653 NLGN2Q8NFZ4 835 aa22.12■■□□□ 1.13
SMC4-209ENST00000468653 FER1L6Q2WGJ9 1857 aa22.11■■□□□ 1.13
SMC4-209ENST00000468653 CACNB3P54284 484 aa22.11■■□□□ 1.13
SMC4-209ENST00000468653 NTRK3Q16288 839 aa22.11■■□□□ 1.13
SMC4-209ENST00000468653 GMLQ99445 158 aa22.11■■□□□ 1.13
SMC4-209ENST00000468653 IDI2Q9BXS1 227 aa22.11■■□□□ 1.13
SMC4-209ENST00000468653 TCP11L1Q9NUJ3 509 aa22.11■■□□□ 1.13
SMC4-209ENST00000468653 ZBTB12Q9Y330 459 aaPredicted RBP22.11■■□□□ 1.13
SMC4-209ENST00000468653 DDAH1O94760 285 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 NCLP19338 710 aaKnown RBP22.1■■□□□ 1.13
SMC4-209ENST00000468653 CXCL9Q07325 125 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 SSRP1Q08945 709 aaKnown RBP22.1■■□□□ 1.13
SMC4-209ENST00000468653 DGKHQ86XP1 1220 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 PHKBQ93100 1093 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 C8orf76Q96K31 380 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 TDRD3Q9H7E2 651 aaKnown RBP22.1■■□□□ 1.13
SMC4-209ENST00000468653 LMBRD1Q9NUN5 540 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 IFNAR1P17181 557 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 TCP10Q12799 353 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 AGBL3Q8NEM8 1001 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 KAT14Q9H8E8 782 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 IL17RBQ9NRM6 502 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 SERPINB13Q9UIV8 391 aa22.1■■□□□ 1.13
SMC4-209ENST00000468653 LTBP3Q9NS15 1303 aa22.09■■□□□ 1.13
SMC4-209ENST00000468653 ECM29Q5VYK3 1845 aa22.09■■□□□ 1.13
SMC4-209ENST00000468653 GUCY1B3Q02153 619 aa22.09■■□□□ 1.13
SMC4-209ENST00000468653 CIAPIN1Q6FI81 312 aa22.09■■□□□ 1.13
SMC4-209ENST00000468653 PRMT6Q96LA8 375 aaPredicted RBP22.09■■□□□ 1.13
SMC4-209ENST00000468653 SLC26A6Q9BXS9 759 aa22.09■■□□□ 1.13
SMC4-209ENST00000468653 ZSCAN16Q9H4T2 348 aaPredicted RBP22.09■■□□□ 1.13
SMC4-209ENST00000468653 SWAP70Q9UH65 585 aa22.09■■□□□ 1.13
SMC4-209ENST00000468653 NPM3O75607 178 aaKnown RBP22.08■■□□□ 1.13
SMC4-209ENST00000468653 DNM1Q05193 864 aaKnown RBP22.08■■□□□ 1.13
SMC4-209ENST00000468653 GABPAQ06546 454 aa22.08■■□□□ 1.13
SMC4-209ENST00000468653 TROAPQ12815 778 aa22.08■■□□□ 1.13
SMC4-209ENST00000468653 DLGAP5Q15398 846 aa22.08■■□□□ 1.13
SMC4-209ENST00000468653 RCSD1Q6JBY9 416 aa22.08■■□□□ 1.13
SMC4-209ENST00000468653 TRIM22Q8IYM9 498 aa22.08■■□□□ 1.13
SMC4-209ENST00000468653 NEDD1Q8NHV4 660 aa22.08■■□□□ 1.13
SMC4-209ENST00000468653 ANKS1AQ92625 1134 aa22.08■■□□□ 1.13
SMC4-209ENST00000468653 DHX36Q9H2U1 1008 aaKnown RBP22.08■■□□□ 1.13
SMC4-209ENST00000468653 RBM28Q9NW13 759 aaKnown RBP22.08■■□□□ 1.13
SMC4-209ENST00000468653 FAM198AQ9UFP1 575 aa22.08■■□□□ 1.13
SMC4-209ENST00000468653 CNPY2Q9Y2B0 182 aa22.08■■□□□ 1.13
SMC4-209ENST00000468653 FMNL1O95466 1100 aaPredicted RBP22.07■■□□□ 1.12
SMC4-209ENST00000468653 RESTQ13127 1097 aa22.07■■□□□ 1.12
SMC4-209ENST00000468653 TNIP1Q15025 636 aa22.07■■□□□ 1.12
SMC4-209ENST00000468653 ZSCAN29Q8IWY8 852 aaPredicted RBP22.07■■□□□ 1.12
SMC4-209ENST00000468653 ZFPM1Q8IX07 1006 aa22.07■■□□□ 1.12
SMC4-209ENST00000468653 ALG1Q9BT22 464 aa22.07■■□□□ 1.12
SMC4-209ENST00000468653 STK36Q9NRP7 1315 aa22.07■■□□□ 1.12
SMC4-209ENST00000468653 RASSF7Q02833 373 aa22.07■■□□□ 1.12
SMC4-209ENST00000468653 CTCFLQ8NI51 663 aaPredicted RBP22.07■■□□□ 1.12
SMC4-209ENST00000468653 WASF1Q92558 559 aa22.07■■□□□ 1.12
SMC4-209ENST00000468653 GDPD2Q9HCC8 539 aa22.07■■□□□ 1.12
SMC4-209ENST00000468653 TMOD2Q9NZR1 351 aa22.07■■□□□ 1.12
SMC4-209ENST00000468653 DDX49Q9Y6V7 483 aaKnown RBP22.07■■□□□ 1.12
SMC4-209ENST00000468653 SPDYE2BA6NHP3 402 aa22.06■■□□□ 1.12
SMC4-209ENST00000468653 SPDYE6P0CI01 402 aa22.06■■□□□ 1.12
SMC4-209ENST00000468653 CCDC82Q8N4S0 544 aa22.06■■□□□ 1.12
SMC4-209ENST00000468653 CRACR2BQ8N4Y2 399 aaPredicted RBP22.06■■□□□ 1.12
SMC4-209ENST00000468653 STX8Q9UNK0 236 aa22.06■■□□□ 1.12
SMC4-209ENST00000468653 USP48Q86UV5 1035 aa22.05■■□□□ 1.12
SMC4-209ENST00000468653 PNMA1Q8ND90 353 aa22.05■■□□□ 1.12
SMC4-209ENST00000468653 FBXO18Q8NFZ0 1043 aa22.05■■□□□ 1.12
SMC4-209ENST00000468653 EHD4Q9H223 541 aa22.05■■□□□ 1.12
SMC4-209ENST00000468653 ENTPD3O75355 529 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 KRT85P78386 507 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 CSPP1Q1MSJ5 1256 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 OTUD7BQ6GQQ9 843 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 FAM173BQ6P4H8 233 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 CMTR1Q8N1G2 835 aaKnown RBP22.04■■□□□ 1.12
SMC4-209ENST00000468653 PI4KBQ9UBF8 816 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 FIBPO43427 364 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 AKAP17AQ02040 695 aaKnown RBP22.04■■□□□ 1.12
SMC4-209ENST00000468653 TRIM29Q14134 588 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 NBPF11Q86T75 865 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms