RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ZSWIM8A7E2V4 1837 aa17.44■□□□□ 0.38
COL27A1-203ENST00000468565 TRIM75PA6NK02 468 aa17.43■□□□□ 0.38
COL27A1-203ENST00000468565 ARHGEF6Q15052 776 aa17.43■□□□□ 0.38
COL27A1-203ENST00000468565 CCDC84Q86UT8 332 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-203ENST00000468565 ZNF280CQ8ND82 737 aa17.43■□□□□ 0.38
COL27A1-203ENST00000468565 GCC1Q96CN9 775 aa17.43■□□□□ 0.38
COL27A1-203ENST00000468565 BACH2Q9BYV9 841 aa17.43■□□□□ 0.38
COL27A1-203ENST00000468565 C17orf99Q6UX52 265 aa17.43■□□□□ 0.38
COL27A1-203ENST00000468565 GADL1Q6ZQY3 521 aa17.43■□□□□ 0.38
COL27A1-203ENST00000468565 SPP2Q13103 211 aa17.42■□□□□ 0.38
COL27A1-203ENST00000468565 SLC4A8Q2Y0W8 1093 aa17.42■□□□□ 0.38
COL27A1-203ENST00000468565 TATDN1Q6P1N9 297 aa17.42■□□□□ 0.38
COL27A1-203ENST00000468565 KBTBD3Q8NAB2 608 aa17.42■□□□□ 0.38
COL27A1-203ENST00000468565 PROCA1Q8NCQ7 364 aaPredicted RBP17.42■□□□□ 0.38
COL27A1-203ENST00000468565 WDR18Q9BV38 432 aa17.42■□□□□ 0.38
COL27A1-203ENST00000468565 ARMT1Q9H993 441 aa17.42■□□□□ 0.38
COL27A1-203ENST00000468565 EFCC1Q9HA90 598 aa17.42■□□□□ 0.38
COL27A1-203ENST00000468565 ERC2O15083 957 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 MBD4O95243 580 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 DCP1AQ9NPI6 582 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-203ENST00000468565 TAOK2Q9UL54 1235 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 ZBTB21Q9ULJ3 1066 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 AGTPBP1Q9UPW5 1226 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 POLR3DP05423 398 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-203ENST00000468565 SLFNL1Q499Z3 407 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 SH3D19Q5HYK7 790 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 TSHZ3Q63HK5 1081 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 SDR42E1Q8WUS8 393 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 ATP8A2Q9NTI2 1148 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 MCM9Q9NXL9 1143 aa17.41■□□□□ 0.38
COL27A1-203ENST00000468565 GDF11O95390 407 aa17.4■□□□□ 0.38
COL27A1-203ENST00000468565 PLCD1P51178 756 aa17.4■□□□□ 0.38
COL27A1-203ENST00000468565 JAG1P78504 1218 aa17.4■□□□□ 0.38
COL27A1-203ENST00000468565 LACTBP83111 547 aaPredicted RBP17.4■□□□□ 0.38
COL27A1-203ENST00000468565 CAP1Q01518 475 aa17.4■□□□□ 0.38
COL27A1-203ENST00000468565 KIF22Q14807 665 aa17.4■□□□□ 0.38
COL27A1-203ENST00000468565 IPO9Q96P70 1041 aaKnown RBP17.4■□□□□ 0.38
COL27A1-203ENST00000468565 ZBTB47Q9UFB7 747 aaPredicted RBP17.4■□□□□ 0.38
COL27A1-203ENST00000468565 CPA4Q9UI42 421 aa17.4■□□□□ 0.38
COL27A1-203ENST00000468565 PTPN22Q9Y2R2 807 aa17.4■□□□□ 0.38
COL27A1-203ENST00000468565 GLRX3O76003 335 aaKnown RBP17.39■□□□□ 0.37
COL27A1-203ENST00000468565 GABPAQ06546 454 aa17.39■□□□□ 0.37
COL27A1-203ENST00000468565 PI4K2BQ8TCG2 481 aa17.39■□□□□ 0.37
COL27A1-203ENST00000468565 SALL3Q9BXA9 1300 aa17.39■□□□□ 0.37
COL27A1-203ENST00000468565 GNRH1P01148 92 aa17.39■□□□□ 0.37
COL27A1-203ENST00000468565 CHGBP05060 677 aa17.39■□□□□ 0.37
COL27A1-203ENST00000468565 CYP2C8P10632 490 aa17.39■□□□□ 0.37
COL27A1-203ENST00000468565 PRKCSHP14314 528 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-203ENST00000468565 MX1P20591 662 aa17.39■□□□□ 0.37
COL27A1-203ENST00000468565 ANKRD45Q5TZF3 282 aa17.39■□□□□ 0.37
COL27A1-203ENST00000468565 ZFYP08048 801 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-203ENST00000468565 BCRP11274 1271 aa17.38■□□□□ 0.37
COL27A1-203ENST00000468565 RGS19P49795 217 aa17.38■□□□□ 0.37
COL27A1-203ENST00000468565 HMGCS2P54868 508 aa17.38■□□□□ 0.37
COL27A1-203ENST00000468565 BACE1P56817 501 aa17.38■□□□□ 0.37
COL27A1-203ENST00000468565 TREML2Q5T2D2 321 aa17.38■□□□□ 0.37
COL27A1-203ENST00000468565 OTUD7AQ8TE49 926 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-203ENST00000468565 PUS7LQ9H0K6 701 aaKnown RBP17.38■□□□□ 0.37
COL27A1-203ENST00000468565 PNMA3Q9UL41 463 aa17.38■□□□□ 0.37
COL27A1-203ENST00000468565 RBBP6Q7Z6E9 1792 aaKnown RBP17.38■□□□□ 0.37
COL27A1-203ENST00000468565 HTTP42858 3142 aa17.37■□□□□ 0.37
COL27A1-203ENST00000468565 C19orf81C9J6K1 198 aa17.37■□□□□ 0.37
COL27A1-203ENST00000468565 PRKAB2O43741 272 aa17.37■□□□□ 0.37
COL27A1-203ENST00000468565 SHMT1P34896 483 aa17.37■□□□□ 0.37
COL27A1-203ENST00000468565 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.37
COL27A1-203ENST00000468565 SHROOM1Q2M3G4 852 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-203ENST00000468565 LRRFIP1Q32MZ4 808 aaKnown RBP17.37■□□□□ 0.37
COL27A1-203ENST00000468565 CERKLQ49MI3 558 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-203ENST00000468565 USP17L10C9JJH3 530 aa17.37■□□□□ 0.37
COL27A1-203ENST00000468565 RNF113AO15541 343 aaKnown RBP17.37■□□□□ 0.37
COL27A1-203ENST00000468565 GH2P01242 217 aa17.37■□□□□ 0.37
COL27A1-203ENST00000468565 MTMR2Q13614 643 aa17.37■□□□□ 0.37
COL27A1-203ENST00000468565 APPBP2Q92624 585 aa17.37■□□□□ 0.37
COL27A1-203ENST00000468565 RWDD1Q9H446 243 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-203ENST00000468565 PRMT2P55345 433 aa17.36■□□□□ 0.37
COL27A1-203ENST00000468565 ABCB5Q2M3G0 1257 aa17.36■□□□□ 0.37
COL27A1-203ENST00000468565 DDRGK1Q96HY6 314 aa17.36■□□□□ 0.37
COL27A1-203ENST00000468565 ARHGAP39Q9C0H5 1083 aa17.36■□□□□ 0.37
COL27A1-203ENST00000468565 TMOD4Q9NZQ9 345 aa17.36■□□□□ 0.37
COL27A1-203ENST00000468565 SWAP70Q9UH65 585 aa17.36■□□□□ 0.37
COL27A1-203ENST00000468565 SLC4A4Q9Y6R1 1079 aa17.36■□□□□ 0.37
COL27A1-203ENST00000468565 SMC5Q8IY18 1101 aa17.35■□□□□ 0.37
COL27A1-203ENST00000468565 AMOTL1Q8IY63 956 aa17.35■□□□□ 0.37
COL27A1-203ENST00000468565 SMCR8Q8TEV9 937 aaPredicted RBP17.35■□□□□ 0.37
COL27A1-203ENST00000468565 CABP5Q9NP86 173 aa17.35■□□□□ 0.37
COL27A1-203ENST00000468565 STAP2Q9UGK3 403 aa17.35■□□□□ 0.37
COL27A1-203ENST00000468565 DOCK3Q8IZD9 2030 aa17.35■□□□□ 0.37
COL27A1-203ENST00000468565 OSBPP22059 807 aa17.35■□□□□ 0.37
COL27A1-203ENST00000468565 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
COL27A1-203ENST00000468565 STRBPQ96SI9 672 aaKnown RBP17.35■□□□□ 0.37
COL27A1-203ENST00000468565 CYP2D6P10635 497 aa17.34■□□□□ 0.37
COL27A1-203ENST00000468565 CTGFP29279 349 aa17.34■□□□□ 0.37
COL27A1-203ENST00000468565 HOXA7P31268 230 aaPredicted RBP17.34■□□□□ 0.37
COL27A1-203ENST00000468565 EVX2Q03828 476 aa17.34■□□□□ 0.37
COL27A1-203ENST00000468565 C12orf60Q5U649 245 aa17.34■□□□□ 0.37
COL27A1-203ENST00000468565 SKAP1Q86WV1 359 aa17.34■□□□□ 0.37
COL27A1-203ENST00000468565 OSBP2Q969R2 916 aa17.34■□□□□ 0.37
COL27A1-203ENST00000468565 PSMC4P43686 418 aa17.33■□□□□ 0.37
COL27A1-203ENST00000468565 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.37
COL27A1-203ENST00000468565 ARMC5Q96C12 935 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms