RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 WDR18Q9BV38 432 aa16.77■□□□□ 0.28
RPP40-204ENST00000468105 CDK5RAP2Q96SN8 1893 aa16.77■□□□□ 0.27
RPP40-204ENST00000468105 CNMDO75829 334 aa16.76■□□□□ 0.27
RPP40-204ENST00000468105 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
RPP40-204ENST00000468105 BACE1P56817 501 aa16.76■□□□□ 0.27
RPP40-204ENST00000468105 HERVK_113P62684 666 aa16.76■□□□□ 0.27
RPP40-204ENST00000468105 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.76■□□□□ 0.27
RPP40-204ENST00000468105 EMILIN3Q9NT22 766 aa16.76■□□□□ 0.27
RPP40-204ENST00000468105 NOB1Q9ULX3 412 aaKnown RBP16.76■□□□□ 0.27
RPP40-204ENST00000468105 NDUFB9Q9Y6M9 179 aa16.76■□□□□ 0.27
RPP40-204ENST00000468105 MAST2Q6P0Q8 1798 aa16.75■□□□□ 0.27
RPP40-204ENST00000468105 GDF11O95390 407 aa16.75■□□□□ 0.27
RPP40-204ENST00000468105 XRCC5P13010 732 aaKnown RBP16.75■□□□□ 0.27
RPP40-204ENST00000468105 MCAMP43121 646 aa16.75■□□□□ 0.27
RPP40-204ENST00000468105 MYO5AQ9Y4I1 1855 aaKnown RBP16.75■□□□□ 0.27
RPP40-204ENST00000468105 MUC3AQ02505 3323 aa16.75■□□□□ 0.27
RPP40-204ENST00000468105 GPR142Q7Z601 462 aa16.74■□□□□ 0.27
RPP40-204ENST00000468105 TEX11Q8IYF3 940 aa16.74■□□□□ 0.27
RPP40-204ENST00000468105 SPATA5Q8NB90 893 aa16.74■□□□□ 0.27
RPP40-204ENST00000468105 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
RPP40-204ENST00000468105 NUDT12Q9BQG2 462 aa16.74■□□□□ 0.27
RPP40-204ENST00000468105 LTBP2Q14767 1821 aa16.73■□□□□ 0.27
RPP40-204ENST00000468105 ERVK-9P63128 1117 aa16.73■□□□□ 0.27
RPP40-204ENST00000468105 ERVK-24P63145 666 aa16.73■□□□□ 0.27
RPP40-204ENST00000468105 SPTY2D1Q68D10 685 aaPredicted RBP16.73■□□□□ 0.27
RPP40-204ENST00000468105 METTL16Q86W50 562 aaKnown RBP16.73■□□□□ 0.27
RPP40-204ENST00000468105 SLF2Q8IX21 1173 aa16.73■□□□□ 0.27
RPP40-204ENST00000468105 TRPV1Q8NER1 839 aa16.73■□□□□ 0.27
RPP40-204ENST00000468105 SMC4Q9NTJ3 1288 aa16.73■□□□□ 0.27
RPP40-204ENST00000468105 RCAN3Q9UKA8 241 aa16.73■□□□□ 0.27
RPP40-204ENST00000468105 TNNQ9UQP3 1299 aa16.73■□□□□ 0.27
RPP40-204ENST00000468105 IGHA2P01877 340 aa16.72■□□□□ 0.27
RPP40-204ENST00000468105 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
RPP40-204ENST00000468105 ARID4AP29374 1257 aaPredicted RBP16.72■□□□□ 0.27
RPP40-204ENST00000468105 IRX3P78415 501 aaPredicted RBP16.72■□□□□ 0.27
RPP40-204ENST00000468105 PABPC4Q13310 644 aaKnown RBP eCLIP16.72■□□□□ 0.27
RPP40-204ENST00000468105 ALDH1L2Q3SY69 923 aa16.72■□□□□ 0.27
RPP40-204ENST00000468105 MAPKAPK5Q8IW41 473 aa16.72■□□□□ 0.27
RPP40-204ENST00000468105 NEUROD6Q96NK8 337 aa16.72■□□□□ 0.27
RPP40-204ENST00000468105 PAGR1Q9BTK6 254 aa16.72■□□□□ 0.27
RPP40-204ENST00000468105 AATFQ9NY61 560 aaKnown RBP eCLIP16.72■□□□□ 0.27
RPP40-204ENST00000468105 RAI14Q9P0K7 980 aa16.72■□□□□ 0.27
RPP40-204ENST00000468105 PALD1Q9ULE6 856 aa16.72■□□□□ 0.27
RPP40-204ENST00000468105 FOCADQ5VW36 1801 aa16.71■□□□□ 0.27
RPP40-204ENST00000468105 SNRKQ9NRH2 765 aa16.71■□□□□ 0.27
RPP40-204ENST00000468105 PI4KBQ9UBF8 816 aa16.71■□□□□ 0.27
RPP40-204ENST00000468105 HERC5Q9UII4 1024 aaKnown RBP16.71■□□□□ 0.27
RPP40-204ENST00000468105 TTC28Q96AY4 2481 aa16.71■□□□□ 0.26
RPP40-204ENST00000468105 SRGAP3O43295 1099 aa16.7■□□□□ 0.26
RPP40-204ENST00000468105 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
RPP40-204ENST00000468105 MVPQ14764 893 aaKnown RBP16.7■□□□□ 0.26
RPP40-204ENST00000468105 C9orf50Q5SZB4 431 aa16.7■□□□□ 0.26
RPP40-204ENST00000468105 FAM109BQ6ICB4 259 aaPredicted RBP16.7■□□□□ 0.26
RPP40-204ENST00000468105 PLEKHH3Q7Z736 793 aa16.7■□□□□ 0.26
RPP40-204ENST00000468105 NPLOC4Q8TAT6 608 aa16.7■□□□□ 0.26
RPP40-204ENST00000468105 TGFBRAP1Q8WUH2 860 aa16.7■□□□□ 0.26
RPP40-204ENST00000468105 SOCS4Q8WXH5 440 aa16.7■□□□□ 0.26
RPP40-204ENST00000468105 TBC1D2Q9BYX2 928 aa16.7■□□□□ 0.26
RPP40-204ENST00000468105 SENP6Q9GZR1 1112 aaPredicted RBP16.7■□□□□ 0.26
RPP40-204ENST00000468105 AS3MTQ9HBK9 375 aa16.7■□□□□ 0.26
RPP40-204ENST00000468105 ZBTB21Q9ULJ3 1066 aa16.7■□□□□ 0.26
RPP40-204ENST00000468105 FLT1P17948 1338 aa16.7■□□□□ 0.26
RPP40-204ENST00000468105 PNMA6EA0A0J9YXQ4 647 aa16.69■□□□□ 0.26
RPP40-204ENST00000468105 USP17L10C9JJH3 530 aa16.69■□□□□ 0.26
RPP40-204ENST00000468105 RARSP54136 660 aaKnown RBP16.69■□□□□ 0.26
RPP40-204ENST00000468105 DYNLL1P63167 89 aaKnown RBP16.69■□□□□ 0.26
RPP40-204ENST00000468105 MTX1Q13505 466 aa16.69■□□□□ 0.26
RPP40-204ENST00000468105 CDX2Q99626 313 aaPredicted RBP16.69■□□□□ 0.26
RPP40-204ENST00000468105 BTBD7Q9P203 1132 aa16.69■□□□□ 0.26
RPP40-204ENST00000468105 SAP30BPQ9UHR5 308 aaKnown RBP16.69■□□□□ 0.26
RPP40-204ENST00000468105 RLFQ13129 1914 aa16.68■□□□□ 0.26
RPP40-204ENST00000468105 LDHCP07864 332 aa16.68■□□□□ 0.26
RPP40-204ENST00000468105 ASNSP08243 561 aa16.68■□□□□ 0.26
RPP40-204ENST00000468105 MAPK4P31152 587 aa16.68■□□□□ 0.26
RPP40-204ENST00000468105 RGS2P41220 211 aa16.68■□□□□ 0.26
RPP40-204ENST00000468105 MAP2K5Q13163 448 aa16.68■□□□□ 0.26
RPP40-204ENST00000468105 SHHQ15465 462 aa16.68■□□□□ 0.26
RPP40-204ENST00000468105 APBA2Q99767 749 aa16.68■□□□□ 0.26
RPP40-204ENST00000468105 TTYH1Q9H313 450 aaPredicted RBP16.68■□□□□ 0.26
RPP40-204ENST00000468105 TMOD4Q9NZQ9 345 aa16.68■□□□□ 0.26
RPP40-204ENST00000468105 C19orf81C9J6K1 198 aa16.67■□□□□ 0.26
RPP40-204ENST00000468105 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
RPP40-204ENST00000468105 CYP2E1P05181 493 aaPredicted RBP16.67■□□□□ 0.26
RPP40-204ENST00000468105 CYP2C19P33261 490 aa16.67■□□□□ 0.26
RPP40-204ENST00000468105 PPP4CP60510 307 aa16.67■□□□□ 0.26
RPP40-204ENST00000468105 GSTO1P78417 241 aa16.67■□□□□ 0.26
RPP40-204ENST00000468105 EVX2Q03828 476 aa16.67■□□□□ 0.26
RPP40-204ENST00000468105 ZYXQ15942 572 aaKnown RBP16.67■□□□□ 0.26
RPP40-204ENST00000468105 ACER1Q8TDN7 264 aa16.67■□□□□ 0.26
RPP40-204ENST00000468105 AKAP2Q9Y2D5 859 aa16.67■□□□□ 0.26
RPP40-204ENST00000468105 GH2P01242 217 aa16.66■□□□□ 0.26
RPP40-204ENST00000468105 ANO1Q5XXA6 986 aa16.66■□□□□ 0.26
RPP40-204ENST00000468105 SH3RF1Q7Z6J0 888 aa16.66■□□□□ 0.26
RPP40-204ENST00000468105 EDC3Q96F86 508 aaKnown RBP16.66■□□□□ 0.26
RPP40-204ENST00000468105 PIH1D3Q9NQM4 214 aaKnown RBP16.66■□□□□ 0.26
RPP40-204ENST00000468105 LRP2BPQ9P2M1 347 aa16.66■□□□□ 0.26
RPP40-204ENST00000468105 DDX20Q9UHI6 824 aaKnown RBP16.66■□□□□ 0.26
RPP40-204ENST00000468105 PTPREP23469 700 aa16.65■□□□□ 0.26
RPP40-204ENST00000468105 RTP1P59025 263 aa16.65■□□□□ 0.26
RPP40-204ENST00000468105 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms