RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 LOC285556D6RIA3 1793 aa14.83□□□□□ -0.03
VPS26A-204ENST00000467852 ADCYAP1R1P41586 468 aa14.83□□□□□ -0.04
VPS26A-204ENST00000467852 SPP2Q13103 211 aa14.83□□□□□ -0.04
VPS26A-204ENST00000467852 NEUROD2Q15784 382 aa14.83□□□□□ -0.04
VPS26A-204ENST00000467852 TAF7LQ5H9L4 462 aa14.83□□□□□ -0.04
VPS26A-204ENST00000467852 CDC42EP5Q6NZY7 148 aa14.83□□□□□ -0.04
VPS26A-204ENST00000467852 FERMT2Q96AC1 680 aa14.83□□□□□ -0.04
VPS26A-204ENST00000467852 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.83□□□□□ -0.04
VPS26A-204ENST00000467852 FAM198AQ9UFP1 575 aa14.83□□□□□ -0.04
VPS26A-204ENST00000467852 PRRC2BQ5JSZ5 2229 aaKnown RBP14.82□□□□□ -0.04
VPS26A-204ENST00000467852 HMGCS2P54868 508 aa14.82□□□□□ -0.04
VPS26A-204ENST00000467852 ATP2B2Q01814 1243 aa14.82□□□□□ -0.04
VPS26A-204ENST00000467852 MAP2K5Q13163 448 aa14.82□□□□□ -0.04
VPS26A-204ENST00000467852 CCDC84Q86UT8 332 aaPredicted RBP14.82□□□□□ -0.04
VPS26A-204ENST00000467852 CHMP4AQ9BY43 222 aa14.82□□□□□ -0.04
VPS26A-204ENST00000467852 TMEM39AQ9NV64 488 aa14.82□□□□□ -0.04
VPS26A-204ENST00000467852 CFAP54Q96N23 3096 aa14.82□□□□□ -0.04
VPS26A-204ENST00000467852 CHD7Q9P2D1 2997 aa14.81□□□□□ -0.04
VPS26A-204ENST00000467852 GLRX3O76003 335 aaKnown RBP14.81□□□□□ -0.04
VPS26A-204ENST00000467852 CAVIN4Q5BKX8 364 aa14.81□□□□□ -0.04
VPS26A-204ENST00000467852 FBXO33Q7Z6M2 555 aa14.81□□□□□ -0.04
VPS26A-204ENST00000467852 ZSCAN29Q8IWY8 852 aaPredicted RBP14.81□□□□□ -0.04
VPS26A-204ENST00000467852 ZNF280CQ8ND82 737 aa14.81□□□□□ -0.04
VPS26A-204ENST00000467852 TBC1D2Q9BYX2 928 aa14.81□□□□□ -0.04
VPS26A-204ENST00000467852 NKX2-4Q9H2Z4 354 aa14.81□□□□□ -0.04
VPS26A-204ENST00000467852 USP40Q9NVE5 1235 aa14.81□□□□□ -0.04
VPS26A-204ENST00000467852 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.81□□□□□ -0.04
VPS26A-204ENST00000467852 ELL2O00472 640 aaPredicted RBP14.8□□□□□ -0.04
VPS26A-204ENST00000467852 GTPBP6O43824 516 aaPredicted RBP14.8□□□□□ -0.04
VPS26A-204ENST00000467852 ALADP13716 330 aa14.8□□□□□ -0.04
VPS26A-204ENST00000467852 CASP7P55210 303 aa14.8□□□□□ -0.04
VPS26A-204ENST00000467852 MAP3K10Q02779 954 aa14.8□□□□□ -0.04
VPS26A-204ENST00000467852 CCDC57Q2TAC2 916 aa14.8□□□□□ -0.04
VPS26A-204ENST00000467852 ZFPM1Q8IX07 1006 aa14.8□□□□□ -0.04
VPS26A-204ENST00000467852 MYH16Q9H6N6 1097 aa14.8□□□□□ -0.04
VPS26A-204ENST00000467852 TXNRD2Q9NNW7 524 aa14.8□□□□□ -0.04
VPS26A-204ENST00000467852 FLRT1Q9NZU1 646 aa14.8□□□□□ -0.04
VPS26A-204ENST00000467852 ATRNL1Q5VV63 1379 aa14.8□□□□□ -0.04
VPS26A-204ENST00000467852 PEX10O60683 326 aa14.79□□□□□ -0.04
VPS26A-204ENST00000467852 ERVK-9P63128 1117 aa14.79□□□□□ -0.04
VPS26A-204ENST00000467852 ERVK-24P63145 666 aa14.79□□□□□ -0.04
VPS26A-204ENST00000467852 PPIGQ13427 754 aaKnown RBP eCLIP14.79□□□□□ -0.04
VPS26A-204ENST00000467852 SLC44A5Q8NCS7 719 aa14.79□□□□□ -0.04
VPS26A-204ENST00000467852 GBF1Q92538 1859 aa14.79□□□□□ -0.04
VPS26A-204ENST00000467852 HLA-CQ95604 372 aa14.79□□□□□ -0.04
VPS26A-204ENST00000467852 ZNF594Q96JF6 807 aaPredicted RBP14.79□□□□□ -0.04
VPS26A-204ENST00000467852 PORCNQ9H237 461 aa14.79□□□□□ -0.04
VPS26A-204ENST00000467852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.79□□□□□ -0.04
VPS26A-204ENST00000467852 USP34Q70CQ2 3546 aa14.79□□□□□ -0.04
VPS26A-204ENST00000467852 SPTBN4Q9H254 2564 aa14.79□□□□□ -0.04
VPS26A-204ENST00000467852 PQBP1O60828 265 aaKnown RBP14.78□□□□□ -0.04
VPS26A-204ENST00000467852 HERVK_113P62684 666 aa14.78□□□□□ -0.04
VPS26A-204ENST00000467852 Q3C1V9 767 aa14.78□□□□□ -0.04
VPS26A-204ENST00000467852 TMEM240Q5SV17 173 aa14.78□□□□□ -0.04
VPS26A-204ENST00000467852 RASIP1Q5U651 963 aa14.78□□□□□ -0.04
VPS26A-204ENST00000467852 CCDC30Q5VVM6 783 aa14.78□□□□□ -0.04
VPS26A-204ENST00000467852 ENTPD3O75355 529 aa14.77□□□□□ -0.05
VPS26A-204ENST00000467852 TIMP1P01033 207 aa14.77□□□□□ -0.05
VPS26A-204ENST00000467852 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
VPS26A-204ENST00000467852 CYP2C19P33261 490 aa14.77□□□□□ -0.05
VPS26A-204ENST00000467852 SH3D19Q5HYK7 790 aa14.77□□□□□ -0.05
VPS26A-204ENST00000467852 ANO1Q5XXA6 986 aa14.77□□□□□ -0.05
VPS26A-204ENST00000467852 TRPV1Q8NER1 839 aa14.77□□□□□ -0.05
VPS26A-204ENST00000467852 GTF3C2Q8WUA4 911 aaPredicted RBP14.77□□□□□ -0.05
VPS26A-204ENST00000467852 CD320Q9NPF0 282 aa14.77□□□□□ -0.05
VPS26A-204ENST00000467852 MBIPQ9NS73 344 aa14.77□□□□□ -0.05
VPS26A-204ENST00000467852 RBPJLQ9UBG7 517 aa14.77□□□□□ -0.05
VPS26A-204ENST00000467852 CACNA1GO43497 2377 aa14.76□□□□□ -0.05
VPS26A-204ENST00000467852 DCDC2CA8MYV0 355 aa14.76□□□□□ -0.05
VPS26A-204ENST00000467852 CYBAP13498 195 aa14.76□□□□□ -0.05
VPS26A-204ENST00000467852 HOXA7P31268 230 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-204ENST00000467852 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-204ENST00000467852 RGS3P49796 1198 aa14.76□□□□□ -0.05
VPS26A-204ENST00000467852 LRRC41Q15345 812 aa14.76□□□□□ -0.05
VPS26A-204ENST00000467852 PAGR1Q9BTK6 254 aa14.76□□□□□ -0.05
VPS26A-204ENST00000467852 TMOD4Q9NZQ9 345 aa14.76□□□□□ -0.05
VPS26A-204ENST00000467852 TRANK1O15050 2925 aa14.76□□□□□ -0.05
VPS26A-204ENST00000467852 CACNA1BQ00975 2339 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 ZNF318Q5VUA4 2279 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 SLC15A5A6NIM6 579 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 CCNA1P78396 465 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 FOXO4P98177 505 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 WDR78Q5VTH9 848 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 PPP2R2DQ66LE6 453 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 MFSD5Q6N075 450 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 PSRC1Q6PGN9 363 aaPredicted RBP14.75□□□□□ -0.05
VPS26A-204ENST00000467852 C16orf59Q7L2K0 433 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 GJD3Q8N144 294 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 PHOX2BQ99453 314 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 OSBPL5Q9H0X9 879 aaPredicted RBP14.75□□□□□ -0.05
VPS26A-204ENST00000467852 MTIF3Q9H2K0 278 aaKnown RBP14.75□□□□□ -0.05
VPS26A-204ENST00000467852 AS3MTQ9HBK9 375 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 MTCH2Q9Y6C9 303 aa14.75□□□□□ -0.05
VPS26A-204ENST00000467852 ATAD5Q96QE3 1844 aa14.74□□□□□ -0.05
VPS26A-204ENST00000467852 C19orf67A6NJJ6 358 aa14.74□□□□□ -0.05
VPS26A-204ENST00000467852 USP17L5A8MUK1 530 aa14.74□□□□□ -0.05
VPS26A-204ENST00000467852 SEPT4O43236 478 aa14.74□□□□□ -0.05
VPS26A-204ENST00000467852 SLC5A1P13866 664 aa14.74□□□□□ -0.05
VPS26A-204ENST00000467852 POU3F3P20264 500 aaPredicted RBP14.74□□□□□ -0.05
VPS26A-204ENST00000467852 FAAP100Q0VG06 881 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms