RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 TNPO2O14787 897 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-211ENST00000467553 SPP2Q13103 211 aa17.03■□□□□ 0.32
CCHCR1-211ENST00000467553 MIGA1Q8NAN2 632 aa17.03■□□□□ 0.32
CCHCR1-211ENST00000467553 TGFBRAP1Q8WUH2 860 aa17.03■□□□□ 0.32
CCHCR1-211ENST00000467553 COA7Q96BR5 231 aa17.03■□□□□ 0.32
CCHCR1-211ENST00000467553 TRIM34Q9BYJ4 488 aa17.03■□□□□ 0.32
CCHCR1-211ENST00000467553 PAG1Q9NWQ8 432 aa17.03■□□□□ 0.32
CCHCR1-211ENST00000467553 BIN2Q9UBW5 565 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-211ENST00000467553 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-211ENST00000467553 C19orf81C9J6K1 198 aa17.02■□□□□ 0.32
CCHCR1-211ENST00000467553 HLA-DOAP06340 250 aa17.02■□□□□ 0.32
CCHCR1-211ENST00000467553 CCL5P13501 91 aa17.02■□□□□ 0.32
CCHCR1-211ENST00000467553 AAMPQ13685 434 aa17.02■□□□□ 0.32
CCHCR1-211ENST00000467553 SLC9C2Q5TAH2 1124 aa17.02■□□□□ 0.32
CCHCR1-211ENST00000467553 ANKRD45Q5TZF3 282 aa17.02■□□□□ 0.32
CCHCR1-211ENST00000467553 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.32
CCHCR1-211ENST00000467553 CDK5RAP2Q96SN8 1893 aa17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 FLT1P17948 1338 aa17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 ADCY3O60266 1144 aa17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 SLURP2P0DP57 97 aa17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 FLT3LGP49771 235 aa17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 MTFR1Q15390 333 aa17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 HABP4Q5JVS0 413 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 MAPKAPK5Q8IW41 473 aa17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 CRACR2BQ8N4Y2 399 aaPredicted RBP17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 HAUS7Q99871 368 aa17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 RNF208Q9H0X6 261 aa17.01■□□□□ 0.31
CCHCR1-211ENST00000467553 FAM196BA6NMK8 535 aa17■□□□□ 0.31
CCHCR1-211ENST00000467553 MYCP01106 439 aaPredicted RBP17■□□□□ 0.31
CCHCR1-211ENST00000467553 HOXA7P31268 230 aaPredicted RBP17■□□□□ 0.31
CCHCR1-211ENST00000467553 HMGCS2P54868 508 aa17■□□□□ 0.31
CCHCR1-211ENST00000467553 BACE1P56817 501 aa17■□□□□ 0.31
CCHCR1-211ENST00000467553 IRX6P78412 446 aaPredicted RBP17■□□□□ 0.31
CCHCR1-211ENST00000467553 HDAC1Q13547 482 aaPredicted RBP17■□□□□ 0.31
CCHCR1-211ENST00000467553 TREML2Q5T2D2 321 aa17■□□□□ 0.31
CCHCR1-211ENST00000467553 TSHZ3Q63HK5 1081 aa17■□□□□ 0.31
CCHCR1-211ENST00000467553 ANKRD13CQ8N6S4 541 aa17■□□□□ 0.31
CCHCR1-211ENST00000467553 HTATIP2Q9BUP3 242 aa17■□□□□ 0.31
CCHCR1-211ENST00000467553 TMOD4Q9NZQ9 345 aa17■□□□□ 0.31
CCHCR1-211ENST00000467553 GABRQQ9UN88 632 aa17■□□□□ 0.31
CCHCR1-211ENST00000467553 PDE6AP16499 860 aa16.99■□□□□ 0.31
CCHCR1-211ENST00000467553 GTF3C2Q8WUA4 911 aaPredicted RBP16.99■□□□□ 0.31
CCHCR1-211ENST00000467553 RWDD1Q9H446 243 aaPredicted RBP16.99■□□□□ 0.31
CCHCR1-211ENST00000467553 ZNF532Q9HCE3 1301 aa16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 SIPA1L1O43166 1804 aa16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 DOCK3Q8IZD9 2030 aa16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 MAGEB6P1A0A0J9YX57 407 aa16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 SGPL1O95470 568 aa16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 USP5P45974 858 aa16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 UBE2Q1Q7Z7E8 422 aa16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 SHISA4Q96DD7 197 aa16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 ASCC2Q9H1I8 757 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 MORF4L1Q9UBU8 362 aa16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 SAP30BPQ9UHR5 308 aaKnown RBP16.98■□□□□ 0.31
CCHCR1-211ENST00000467553 USP17L10C9JJH3 530 aa16.97■□□□□ 0.31
CCHCR1-211ENST00000467553 IRX3P78415 501 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-211ENST00000467553 RRP1BQ14684 758 aaKnown RBP16.97■□□□□ 0.31
CCHCR1-211ENST00000467553 SLFNL1Q499Z3 407 aa16.97■□□□□ 0.31
CCHCR1-211ENST00000467553 CCDC84Q86UT8 332 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-211ENST00000467553 OTUD7AQ8TE49 926 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-211ENST00000467553 U2AF1L4Q8WU68 220 aaKnown RBP16.97■□□□□ 0.31
CCHCR1-211ENST00000467553 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.97■□□□□ 0.313e-7■■■□□ 15.9
CCHCR1-211ENST00000467553 EHD4Q9H223 541 aa16.97■□□□□ 0.31
CCHCR1-211ENST00000467553 PALD1Q9ULE6 856 aa16.97■□□□□ 0.31
CCHCR1-211ENST00000467553 MYH1P12882 1939 aa16.97■□□□□ 0.31
CCHCR1-211ENST00000467553 CEP290O15078 2479 aa16.96■□□□□ 0.31
CCHCR1-211ENST00000467553 INHAP05111 366 aa16.96■□□□□ 0.31
CCHCR1-211ENST00000467553 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
CCHCR1-211ENST00000467553 TTC6Q86TZ1 520 aa16.96■□□□□ 0.31
CCHCR1-211ENST00000467553 DNAJC18Q9H819 358 aa16.96■□□□□ 0.31
CCHCR1-211ENST00000467553 TAOK2Q9UL54 1235 aa16.96■□□□□ 0.31
CCHCR1-211ENST00000467553 TCRBV5S4A2TA0A5A2 114 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 ERC2O15083 957 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 IGHDP01880 384 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 ADD2P35612 726 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 MTMR2Q13614 643 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 ZSCAN25Q6NSZ9 544 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 TATDN1Q6P1N9 297 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 USP17L2Q6R6M4 530 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 DPF3Q92784 378 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 RIOK1Q9BRS2 568 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 UNC93B1Q9H1C4 597 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 PAK6Q9NQU5 681 aaPredicted RBP16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 SERPINB13Q9UIV8 391 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 ZBTB21Q9ULJ3 1066 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 NR2E3Q9Y5X4 410 aa16.95■□□□□ 0.3
CCHCR1-211ENST00000467553 CHGBP05060 677 aa16.94■□□□□ 0.3
CCHCR1-211ENST00000467553 USP14P54578 494 aa16.94■□□□□ 0.3
CCHCR1-211ENST00000467553 TRMT44Q8IYL2 757 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-211ENST00000467553 GPRC5AQ8NFJ5 357 aa16.94■□□□□ 0.3
CCHCR1-211ENST00000467553 CRNKL1Q9BZJ0 848 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-211ENST00000467553 ARMT1Q9H993 441 aa16.94■□□□□ 0.3
CCHCR1-211ENST00000467553 GJD2Q9UKL4 321 aa16.94■□□□□ 0.3
CCHCR1-211ENST00000467553 TTC41PQ6P2S7 1318 aa16.94■□□□□ 0.3
CCHCR1-211ENST00000467553 FARP2O94887 1054 aaPredicted RBP16.93■□□□□ 0.3
CCHCR1-211ENST00000467553 TFRCP02786 760 aaKnown RBP16.93■□□□□ 0.3
CCHCR1-211ENST00000467553 HMGCRP04035 888 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms