RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 LAMA4Q16363 1823 aa12.5□□□□□ -0.41
SFXN3-204ENST00000466982 CTAGE9A4FU28 777 aa12.5□□□□□ -0.41
SFXN3-204ENST00000466982 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
SFXN3-204ENST00000466982 PREPLQ4J6C6 727 aaPredicted RBP12.5□□□□□ -0.41
SFXN3-204ENST00000466982 AGXT2Q9BYV1 514 aa12.5□□□□□ -0.41
SFXN3-204ENST00000466982 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
SFXN3-204ENST00000466982 PCDHGA4Q9Y5G9 962 aa12.5□□□□□ -0.41
SFXN3-204ENST00000466982 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
SFXN3-204ENST00000466982 PECAM1P16284 738 aaPredicted RBP12.49□□□□□ -0.41
SFXN3-204ENST00000466982 GGCXP38435 758 aa12.49□□□□□ -0.41
SFXN3-204ENST00000466982 RBL2Q08999 1139 aa12.49□□□□□ -0.41
SFXN3-204ENST00000466982 ARMC3Q5W041 872 aa12.49□□□□□ -0.41
SFXN3-204ENST00000466982 SMARCC1Q92922 1105 aaPredicted RBP12.49□□□□□ -0.41
SFXN3-204ENST00000466982 MAF1Q9H063 256 aa12.49□□□□□ -0.41
SFXN3-204ENST00000466982 ODF2LQ9ULJ1 636 aa12.49□□□□□ -0.41
SFXN3-204ENST00000466982 HPCAL4Q9UM19 191 aa12.49□□□□□ -0.41
SFXN3-204ENST00000466982 HPSEQ9Y251 543 aa12.49□□□□□ -0.41
SFXN3-204ENST00000466982 SAMM50Q9Y512 469 aa12.49□□□□□ -0.41
SFXN3-204ENST00000466982 PRAMEF22A3QJZ6 481 aa12.49□□□□□ -0.41
SFXN3-204ENST00000466982 IRAK1P51617 712 aa12.49□□□□□ -0.41
SFXN3-204ENST00000466982 AKR1B15C9JRZ8 316 aaPredicted RBP12.48□□□□□ -0.41
SFXN3-204ENST00000466982 ZNF18P17022 549 aa12.48□□□□□ -0.41
SFXN3-204ENST00000466982 RDXP35241 583 aaKnown RBP12.48□□□□□ -0.41
SFXN3-204ENST00000466982 SLC39A14Q15043 492 aa12.48□□□□□ -0.41
SFXN3-204ENST00000466982 STK11IPQ8N1F8 1099 aa12.48□□□□□ -0.41
SFXN3-204ENST00000466982 MYO1FO00160 1098 aa12.48□□□□□ -0.41
SFXN3-204ENST00000466982 EBAG9O00559 213 aa12.48□□□□□ -0.41
SFXN3-204ENST00000466982 AARSP49588 968 aaKnown RBP eCLIP12.48□□□□□ -0.41
SFXN3-204ENST00000466982 KIF23Q02241 960 aaPredicted RBP12.48□□□□□ -0.41
SFXN3-204ENST00000466982 EPHA10Q5JZY3 1008 aa12.48□□□□□ -0.41
SFXN3-204ENST00000466982 ARHGEF25Q86VW2 580 aa12.48□□□□□ -0.41
SFXN3-204ENST00000466982 GRAMD1CQ8IYS0 662 aa12.48□□□□□ -0.41
SFXN3-204ENST00000466982 ZKSCAN4Q969J2 545 aaPredicted RBP12.48□□□□□ -0.41
SFXN3-204ENST00000466982 ZNF274Q96GC6 653 aaPredicted RBP12.48□□□□□ -0.41
SFXN3-204ENST00000466982 TMX4Q9H1E5 349 aaPredicted RBP12.48□□□□□ -0.41
SFXN3-204ENST00000466982 AGPSO00116 658 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 GRM8O00222 908 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 A1BGP04217 495 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 AIMP1Q12904 312 aaKnown RBP12.47□□□□□ -0.41
SFXN3-204ENST00000466982 SNX1Q13596 522 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 NR1I3Q14994 352 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 BCAS4Q8TDM0 211 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 PARD3BQ8TEW8 1205 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 DBNDD2Q9BQY9 259 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 GBP3Q9H0R5 595 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 ACBD3Q9H3P7 528 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 TBC1D2BQ9UPU7 963 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 AKAP12Q02952 1782 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 FLT4P35916 1363 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 IBSPP21815 317 aaPredicted RBP12.47□□□□□ -0.41
SFXN3-204ENST00000466982 PRPHP41219 470 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 CABS1Q96KC9 395 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 KIF9Q9HAQ2 790 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 HDAC6Q9UBN7 1215 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 ENC1O14682 589 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 CHUKO15111 745 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 ATP5JP18859 108 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 GCKP35557 465 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 TFCP2Q12800 502 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 SLC9C2Q5TAH2 1124 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 NAPGQ99747 312 aaPredicted RBP12.47□□□□□ -0.41
SFXN3-204ENST00000466982 CRACR2AQ9BSW2 395 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 TRIM10Q9UDY6 481 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 MAN1B1Q9UKM7 699 aa12.47□□□□□ -0.41
SFXN3-204ENST00000466982 USP31Q70CQ4 1352 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 A0A1B0GUA9 196 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 SRGAP2O75044 1071 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 INPP5BP32019 993 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 HAND2P61296 217 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 STIM1Q13586 685 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 ZRSR2Q15696 482 aaKnown RBP12.46□□□□□ -0.41
SFXN3-204ENST00000466982 AMOTQ4VCS5 1084 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 WDR93Q6P2C0 686 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 NCAPG2Q86XI2 1143 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 CD248Q9HCU0 757 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 GOPCQ9HD26 462 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 CAPN7Q9Y6W3 813 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 NCAPD2Q15021 1401 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 DIP2AQ14689 1571 aa12.46□□□□□ -0.41
SFXN3-204ENST00000466982 SHOX2O60902 331 aaPredicted RBP12.46□□□□□ -0.42
SFXN3-204ENST00000466982 CASP14P31944 242 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 WLSQ5T9L3 541 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 CCDC102BQ68D86 513 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 KSR2Q6VAB6 950 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 RASGRP2Q7LDG7 609 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 BRAPQ7Z569 592 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 PANX2Q96RD6 677 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 POLD4Q9HCU8 107 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 KCNH3Q9ULD8 1083 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 MYO6Q9UM54 1294 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 TFR2Q9UP52 801 aa12.46□□□□□ -0.42
SFXN3-204ENST00000466982 FXR1P51114 621 aaKnown RBP eCLIP12.45□□□□□ -0.42
SFXN3-204ENST00000466982 GRIN1Q05586 938 aa12.45□□□□□ -0.42
SFXN3-204ENST00000466982 PTPAQ15257 358 aa12.45□□□□□ -0.42
SFXN3-204ENST00000466982 IQCA1Q86XH1 822 aa12.45□□□□□ -0.42
SFXN3-204ENST00000466982 COG1Q8WTW3 980 aa12.45□□□□□ -0.42
SFXN3-204ENST00000466982 HPS5Q9UPZ3 1129 aa12.45□□□□□ -0.42
SFXN3-204ENST00000466982 SBNO1A3KN83 1393 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms