RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 VAMP1P23763 118 aa6.72□□□□□ -1.33
VPS13D-203ENST00000466732 SLC6A19Q695T7 634 aa6.72□□□□□ -1.33
VPS13D-203ENST00000466732 NFXL1Q6ZNB6 911 aa6.72□□□□□ -1.33
VPS13D-203ENST00000466732 MCATQ8IVS2 390 aaKnown RBP6.72□□□□□ -1.33
VPS13D-203ENST00000466732 RIN3Q8TB24 985 aa6.72□□□□□ -1.33
VPS13D-203ENST00000466732 ACSF2Q96CM8 615 aaPredicted RBP6.72□□□□□ -1.33
VPS13D-203ENST00000466732 DPH2Q9BQC3 489 aaPredicted RBP6.72□□□□□ -1.33
VPS13D-203ENST00000466732 PLAGL2Q9UPG8 496 aa6.72□□□□□ -1.33
VPS13D-203ENST00000466732 POLR3KQ9Y2Y1 108 aaPredicted RBP6.72□□□□□ -1.33
VPS13D-203ENST00000466732 SUPT16HQ9Y5B9 1047 aaKnown RBP6.72□□□□□ -1.33
VPS13D-203ENST00000466732 TLR3O15455 904 aaKnown RBP6.71□□□□□ -1.34
VPS13D-203ENST00000466732 GREM1O60565 184 aa6.71□□□□□ -1.34
VPS13D-203ENST00000466732 RECKO95980 971 aa6.71□□□□□ -1.34
VPS13D-203ENST00000466732 PLCG1P19174 1290 aa6.71□□□□□ -1.34
VPS13D-203ENST00000466732 ITIH2P19823 946 aa6.71□□□□□ -1.34
VPS13D-203ENST00000466732 ZNF76P36508 570 aa6.71□□□□□ -1.34
VPS13D-203ENST00000466732 FANCCQ00597 558 aa6.71□□□□□ -1.34
VPS13D-203ENST00000466732 IFI16Q16666 785 aaKnown RBP6.71□□□□□ -1.34
VPS13D-203ENST00000466732 REC114Q7Z4M0 266 aa6.71□□□□□ -1.34
VPS13D-203ENST00000466732 ZNF296Q8WUU4 475 aaPredicted RBP6.71□□□□□ -1.34
VPS13D-203ENST00000466732 BCL7CQ8WUZ0 217 aaPredicted RBP6.71□□□□□ -1.34
VPS13D-203ENST00000466732 PRDM5Q9NQX1 630 aaPredicted RBP6.71□□□□□ -1.34
VPS13D-203ENST00000466732 ADAMTS1Q9UHI8 967 aa6.71□□□□□ -1.34
VPS13D-203ENST00000466732 OAS3Q9Y6K5 1087 aaKnown RBP6.71□□□□□ -1.34
VPS13D-203ENST00000466732 PRR36Q9H6K5 1346 aa6.71□□□□□ -1.34
VPS13D-203ENST00000466732 GRIN3BO60391 1043 aa6.7□□□□□ -1.34
VPS13D-203ENST00000466732 TMEM201Q5SNT2 666 aa6.7□□□□□ -1.34
VPS13D-203ENST00000466732 LETMD1Q6P1Q0 360 aa6.7□□□□□ -1.34
VPS13D-203ENST00000466732 FLCNQ8NFG4 579 aa6.7□□□□□ -1.34
VPS13D-203ENST00000466732 MRRFQ96E11 262 aaKnown RBP6.7□□□□□ -1.34
VPS13D-203ENST00000466732 LRRC3Q9BY71 257 aa6.7□□□□□ -1.34
VPS13D-203ENST00000466732 METTL5Q9NRN9 209 aaKnown RBP6.7□□□□□ -1.34
VPS13D-203ENST00000466732 TPX2Q9ULW0 747 aaKnown RBP6.7□□□□□ -1.34
VPS13D-203ENST00000466732 MAPK8IP1Q9UQF2 711 aa6.7□□□□□ -1.34
VPS13D-203ENST00000466732 CNTNAP4Q9C0A0 1308 aa6.7□□□□□ -1.34
VPS13D-203ENST00000466732 ROBO2Q9HCK4 1378 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 UPK3BL1B0FP48 263 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 UPK3BL2E5RIL1 263 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 BNIP3Q12983 259 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 CWF19L2Q2TBE0 894 aaKnown RBP6.69□□□□□ -1.34
VPS13D-203ENST00000466732 WFDC3Q8IUB2 231 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 STK11IPQ8N1F8 1099 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 MISP3Q96FF7 219 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 FBXL18Q96ME1 805 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 TNKS2Q9H2K2 1166 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 REV1Q9UBZ9 1251 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 SLC5A6Q9Y289 635 aa6.69□□□□□ -1.34
VPS13D-203ENST00000466732 CCDC9Q9Y3X0 531 aaKnown RBP6.69□□□□□ -1.34
VPS13D-203ENST00000466732 TMEM265A0A087WTH1 108 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 UNCXA6NJT0 531 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 GNAT3A8MTJ3 354 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 HTR3BO95264 441 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 CRKP46108 304 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 PRKCQQ04759 706 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 SFRP5Q5T4F7 317 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 ZNF574Q6ZN55 896 aaPredicted RBP6.68□□□□□ -1.34
VPS13D-203ENST00000466732 CDH24Q86UP0 819 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 SPACA3Q8IXA5 215 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 TP53INP2Q8IXH6 220 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 FAM13CQ8NE31 585 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 RNF34Q969K3 372 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 BRMS1Q9HCU9 246 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 PAK6Q9NQU5 681 aaPredicted RBP6.68□□□□□ -1.34
VPS13D-203ENST00000466732 UBP1Q9NZI7 540 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 VAV3Q9UKW4 847 aa6.68□□□□□ -1.34
VPS13D-203ENST00000466732 PRR33A8MZF0 331 aa6.67□□□□□ -1.34
VPS13D-203ENST00000466732 SCAMP3O14828 347 aaKnown RBP6.67□□□□□ -1.34
VPS13D-203ENST00000466732 YARSP54577 528 aaKnown RBP6.67□□□□□ -1.34
VPS13D-203ENST00000466732 AOC3Q16853 763 aa6.67□□□□□ -1.34
VPS13D-203ENST00000466732 NKPD1Q17RQ9 610 aa6.67□□□□□ -1.34
VPS13D-203ENST00000466732 ZNF394Q53GI3 561 aa6.67□□□□□ -1.34
VPS13D-203ENST00000466732 ZNF746Q6NUN9 644 aaPredicted RBP6.67□□□□□ -1.34
VPS13D-203ENST00000466732 C22orf34Q6ZV56 151 aa6.67□□□□□ -1.34
VPS13D-203ENST00000466732 SPRED2Q7Z698 418 aa6.67□□□□□ -1.34
VPS13D-203ENST00000466732 USP48Q86UV5 1035 aa6.67□□□□□ -1.34
VPS13D-203ENST00000466732 HRASLS5Q96KN8 279 aa6.67□□□□□ -1.34
VPS13D-203ENST00000466732 KIAA1522Q9P206 1035 aaPredicted RBP6.67□□□□□ -1.34
VPS13D-203ENST00000466732 SNX11Q9Y5W9 270 aa6.67□□□□□ -1.34
VPS13D-203ENST00000466732 CHURC1-FNTBB4DL54 471 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 RBAK-RBAKDNI3L0D1 243 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 ZNF865P0CJ78 1059 aaPredicted RBP6.66□□□□□ -1.34
VPS13D-203ENST00000466732 CD96P40200 585 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 KIAA0825Q8IV33 1275 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 ABI1Q8IZP0 508 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 DNAJB8Q8NHS0 232 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 PPP1R13LQ8WUF5 828 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 CYB5D2Q8WUJ1 264 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 EAF1Q96JC9 268 aaPredicted RBP6.66□□□□□ -1.34
VPS13D-203ENST00000466732 SPON2Q9BUD6 331 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 NT5C1AQ9BXI3 368 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 KLHL3Q9UH77 587 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 CEP131Q9UPN4 1083 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 PCDHB14Q9Y5E9 798 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 PCDHGB7Q9Y5F8 929 aa6.66□□□□□ -1.34
VPS13D-203ENST00000466732 DNAJA2O60884 412 aa6.65□□□□□ -1.34
VPS13D-203ENST00000466732 ATE1O95260 518 aa6.65□□□□□ -1.34
VPS13D-203ENST00000466732 CBX7O95931 251 aa6.65□□□□□ -1.34
VPS13D-203ENST00000466732 CD8BP10966 210 aa6.65□□□□□ -1.34
VPS13D-203ENST00000466732 CYP7A1P22680 504 aa6.65□□□□□ -1.34
VPS13D-203ENST00000466732 APOBRQ0VD83 1088 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms