RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 LRRC7Q96NW7 1537 aa10.54□□□□□ -0.72
LSG1-206ENST00000466391 A0A0A0MRY4 1105 aa10.54□□□□□ -0.72
LSG1-206ENST00000466391 RNF225M0QZC1 329 aaPredicted RBP10.54□□□□□ -0.72
LSG1-206ENST00000466391 DIAPH1O60610 1272 aaKnown RBP10.54□□□□□ -0.72
LSG1-206ENST00000466391 GNA15P30679 374 aa10.54□□□□□ -0.72
LSG1-206ENST00000466391 RARSP54136 660 aaKnown RBP10.54□□□□□ -0.72
LSG1-206ENST00000466391 FCGRTP55899 365 aa10.54□□□□□ -0.72
LSG1-206ENST00000466391 RAC1P63000 192 aa10.54□□□□□ -0.72
LSG1-206ENST00000466391 TRIM28Q13263 835 aaKnown RBP10.54□□□□□ -0.72
LSG1-206ENST00000466391 MLECQ14165 292 aa10.54□□□□□ -0.72
LSG1-206ENST00000466391 ILDR2Q71H61 639 aa10.54□□□□□ -0.72
LSG1-206ENST00000466391 FOXD4L4Q8WXT5 416 aaPredicted RBP10.54□□□□□ -0.72
LSG1-206ENST00000466391 BACH2Q9BYV9 841 aa10.54□□□□□ -0.72
LSG1-206ENST00000466391 FER1L4A9Z1Z3 1794 aa10.54□□□□□ -0.72
LSG1-206ENST00000466391 NALCNQ8IZF0 1738 aa10.53□□□□□ -0.72
LSG1-206ENST00000466391 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.53□□□□□ -0.72
LSG1-206ENST00000466391 BCAR3O75815 825 aa10.53□□□□□ -0.72
LSG1-206ENST00000466391 COL8A1P27658 744 aa10.53□□□□□ -0.72
LSG1-206ENST00000466391 ANP32AP39687 249 aaKnown RBP10.53□□□□□ -0.72
LSG1-206ENST00000466391 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
LSG1-206ENST00000466391 PRRT3Q5FWE3 981 aa10.53□□□□□ -0.72
LSG1-206ENST00000466391 FAM117BQ6P1L5 589 aa10.53□□□□□ -0.72
LSG1-206ENST00000466391 VN1R5Q7Z5H4 357 aa10.53□□□□□ -0.72
LSG1-206ENST00000466391 WAPLQ7Z5K2 1190 aa10.53□□□□□ -0.72
LSG1-206ENST00000466391 FAM161BQ96MY7 647 aa10.53□□□□□ -0.72
LSG1-206ENST00000466391 H3BRJ5 948 aa10.52□□□□□ -0.73
LSG1-206ENST00000466391 GIPC1O14908 333 aa10.52□□□□□ -0.73
LSG1-206ENST00000466391 PSMD2Q13200 908 aa10.52□□□□□ -0.73
LSG1-206ENST00000466391 DTHD1Q6ZMT9 781 aa10.52□□□□□ -0.73
LSG1-206ENST00000466391 FRMD6Q96NE9 622 aa10.52□□□□□ -0.73
LSG1-206ENST00000466391 C12orf49Q9H741 205 aa10.52□□□□□ -0.73
LSG1-206ENST00000466391 MAPK8IP3Q9UPT6 1336 aa10.52□□□□□ -0.73
LSG1-206ENST00000466391 ROBO2Q9HCK4 1378 aa10.52□□□□□ -0.73
LSG1-206ENST00000466391 VIRMAQ69YN4 1812 aaKnown RBP10.51□□□□□ -0.73
LSG1-206ENST00000466391 XRN1Q8IZH2 1706 aaKnown RBP10.51□□□□□ -0.73
LSG1-206ENST00000466391 SETDB1Q15047 1291 aa10.51□□□□□ -0.73
LSG1-206ENST00000466391 FMR1NBQ8N0W7 255 aaPredicted RBP10.51□□□□□ -0.73
LSG1-206ENST00000466391 DTWD1Q8N5C7 304 aa10.51□□□□□ -0.73
LSG1-206ENST00000466391 SLC7A3Q8WY07 619 aa10.51□□□□□ -0.73
LSG1-206ENST00000466391 CARD10Q9BWT7 1032 aa10.51□□□□□ -0.73
LSG1-206ENST00000466391 POLKQ9UBT6 870 aa10.51□□□□□ -0.73
LSG1-206ENST00000466391 DEAF1O75398 565 aaPredicted RBP10.5□□□□□ -0.73
LSG1-206ENST00000466391 ZNF16P17020 682 aaPredicted RBP10.5□□□□□ -0.73
LSG1-206ENST00000466391 EIF4BP23588 611 aaKnown RBP10.5□□□□□ -0.73
LSG1-206ENST00000466391 ITPKAP23677 461 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 DAB2P98082 770 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 IKBKEQ14164 716 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 ZNF428Q96B54 188 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 IPO9Q96P70 1041 aaKnown RBP10.5□□□□□ -0.73
LSG1-206ENST00000466391 SRCIN1Q9C0H9 1055 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 CLEC4MQ9H2X3 399 aaPredicted RBP10.5□□□□□ -0.73
LSG1-206ENST00000466391 ZNF576Q9H609 170 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 AKAP2Q9Y2D5 859 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 RRP7AQ9Y3A4 280 aaKnown RBP10.5□□□□□ -0.73
LSG1-206ENST00000466391 USP54Q70EL1 1684 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 PIK3R4Q99570 1358 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 OVOS2A0A0J9YW53 1432 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 OVOS2Q6IE36 1432 aa10.5□□□□□ -0.73
LSG1-206ENST00000466391 SOX1O00570 391 aaPredicted RBP10.49□□□□□ -0.73
LSG1-206ENST00000466391 FSCN2O14926 492 aa10.49□□□□□ -0.73
LSG1-206ENST00000466391 PCDH1Q08174 1060 aa10.49□□□□□ -0.73
LSG1-206ENST00000466391 FBXO11Q86XK2 927 aa10.49□□□□□ -0.73
LSG1-206ENST00000466391 NOP58Q9Y2X3 529 aaKnown RBP10.49□□□□□ -0.73
LSG1-206ENST00000466391 TBX22Q9Y458 520 aa10.49□□□□□ -0.73
LSG1-206ENST00000466391 AK5Q9Y6K8 562 aa10.49□□□□□ -0.73
LSG1-206ENST00000466391 PRR36Q9H6K5 1346 aa10.49□□□□□ -0.73
LSG1-206ENST00000466391 SSH2Q76I76 1423 aa10.49□□□□□ -0.73
LSG1-206ENST00000466391 PTPRUQ92729 1446 aa10.49□□□□□ -0.73
LSG1-206ENST00000466391 U2SURPO15042 1029 aaKnown RBP10.48□□□□□ -0.73
LSG1-206ENST00000466391 USP17L7P0C7H9 530 aa10.48□□□□□ -0.73
LSG1-206ENST00000466391 SPATA31C1P0DKV0 1188 aa10.48□□□□□ -0.73
LSG1-206ENST00000466391 ESRRAP11474 423 aaPredicted RBP10.48□□□□□ -0.73
LSG1-206ENST00000466391 GSTT1P30711 240 aa10.48□□□□□ -0.73
LSG1-206ENST00000466391 GRIK4Q16099 956 aa10.48□□□□□ -0.73
LSG1-206ENST00000466391 HGSNATQ68CP4 663 aa10.48□□□□□ -0.73
LSG1-206ENST00000466391 TMC4Q7Z404 712 aa10.48□□□□□ -0.73
LSG1-206ENST00000466391 GALNT11Q8NCW6 608 aa10.48□□□□□ -0.73
LSG1-206ENST00000466391 FAM8A1Q9UBU6 413 aa10.48□□□□□ -0.73
LSG1-206ENST00000466391 USP31Q70CQ4 1352 aa10.48□□□□□ -0.73
LSG1-206ENST00000466391 ELNP15502 786 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 LTKP29376 864 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 IL13P35225 146 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 PIP4K2BP78356 416 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 PTPN12Q05209 780 aaKnown RBP10.47□□□□□ -0.73
LSG1-206ENST00000466391 CALD1Q05682 793 aaKnown RBP10.47□□□□□ -0.73
LSG1-206ENST00000466391 ZNF423Q2M1K9 1284 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 MAP4K3Q8IVH8 894 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 PMFBP1Q8TBY8 1022 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 SRA1Q9HD15 236 aaKnown RBP10.47□□□□□ -0.73
LSG1-206ENST00000466391 SEC31BQ9NQW1 1179 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 EID1Q9Y6B2 187 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 USP6P35125 1406 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 ANKARQ7Z5J8 1434 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 ZNF142P52746 1687 aaPredicted RBP10.47□□□□□ -0.73
LSG1-206ENST00000466391 RGPD1P0DJD0 1748 aa10.47□□□□□ -0.73
LSG1-206ENST00000466391 RBM47A0AV96 593 aaKnown RBP10.46□□□□□ -0.73
LSG1-206ENST00000466391 XRCC5P13010 732 aaKnown RBP10.46□□□□□ -0.73
LSG1-206ENST00000466391 ARL4DP49703 201 aa10.46□□□□□ -0.73
LSG1-206ENST00000466391 KCNMA1Q12791 1236 aa10.46□□□□□ -0.73
LSG1-206ENST00000466391 NFE2L2Q16236 605 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms