RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 FAM84BQ96KN1 310 aaPredicted RBP18.75■□□□□ 0.59
SLX4-202ENST00000466154 ZSCAN10Q96SZ4 725 aaPredicted RBP18.75■□□□□ 0.59
SLX4-202ENST00000466154 GOLGB1Q14789 3259 aaKnown RBP18.75■□□□□ 0.59
SLX4-202ENST00000466154 PNPLA7Q6ZV29 1317 aa18.75■□□□□ 0.59
SLX4-202ENST00000466154 EARS2Q5JPH6 523 aaKnown RBP18.75■□□□□ 0.59
SLX4-202ENST00000466154 TMTC2Q8N394 836 aa18.75■□□□□ 0.59
SLX4-202ENST00000466154 POSTNQ15063 836 aa18.74■□□□□ 0.59
SLX4-202ENST00000466154 SYT10Q6XYQ8 523 aa18.74■□□□□ 0.59
SLX4-202ENST00000466154 EPSTI1Q96J88 318 aa18.74■□□□□ 0.59
SLX4-202ENST00000466154 XBP1P17861 261 aa18.74■□□□□ 0.59
SLX4-202ENST00000466154 RILPL1Q5EBL4 403 aa18.74■□□□□ 0.59
SLX4-202ENST00000466154 SMARCE1Q969G3 411 aa18.74■□□□□ 0.59
SLX4-202ENST00000466154 PAXBP1Q9Y5B6 917 aa18.74■□□□□ 0.59
SLX4-202ENST00000466154 GNPATO15228 680 aa18.74■□□□□ 0.59
SLX4-202ENST00000466154 TOP1P11387 765 aaKnown RBP18.74■□□□□ 0.59
SLX4-202ENST00000466154 NCBP1Q09161 790 aaKnown RBP18.74■□□□□ 0.59
SLX4-202ENST00000466154 HOOK1Q9UJC3 728 aaKnown RBP18.74■□□□□ 0.59
SLX4-202ENST00000466154 SETDB2Q96T68 719 aa18.73■□□□□ 0.59
SLX4-202ENST00000466154 CCDC94Q9BW85 323 aaPredicted RBP18.73■□□□□ 0.59
SLX4-202ENST00000466154 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
SLX4-202ENST00000466154 BMP6P22004 513 aa18.73■□□□□ 0.59
SLX4-202ENST00000466154 MECOMQ03112 1051 aa18.73■□□□□ 0.59
SLX4-202ENST00000466154 KIF18AQ8NI77 898 aa18.73■□□□□ 0.59
SLX4-202ENST00000466154 TSPY2A6NKD2 308 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 E4F1Q66K89 784 aaPredicted RBP18.72■□□□□ 0.59
SLX4-202ENST00000466154 TIGD1Q96MW7 591 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 NLRP3Q96P20 1036 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 GPR101Q96P66 508 aaPredicted RBP18.72■□□□□ 0.59
SLX4-202ENST00000466154 RIOK1Q9BRS2 568 aaKnown RBP18.72■□□□□ 0.59
SLX4-202ENST00000466154 CDCA7Q9BWT1 371 aaPredicted RBP18.72■□□□□ 0.59
SLX4-202ENST00000466154 FBXO2Q9UK22 296 aaPredicted RBP18.72■□□□□ 0.59
SLX4-202ENST00000466154 MAN1B1Q9UKM7 699 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 NFE2L3Q9Y4A8 694 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 ZPR1O75312 459 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 SMYD4Q8IYR2 804 aaPredicted RBP18.72■□□□□ 0.59
SLX4-202ENST00000466154 CCDC150Q8NCX0 1101 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 NGLY1Q96IV0 654 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 TUBE1Q9UJT0 475 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 STK36Q9NRP7 1315 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 VWA3AA6NCI4 1184 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 TRIM75PA6NK02 468 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
SLX4-202ENST00000466154 CTR9Q6PD62 1173 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 BPIFA3Q9BQP9 254 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 FOXP1Q9H334 677 aaPredicted RBP18.72■□□□□ 0.59
SLX4-202ENST00000466154 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.72■□□□□ 0.59
SLX4-202ENST00000466154 BSDC1Q9NW68 430 aaPredicted RBP18.72■□□□□ 0.59
SLX4-202ENST00000466154 ANKIB1Q9P2G1 1089 aa18.72■□□□□ 0.59
SLX4-202ENST00000466154 WNT7AO00755 349 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 UBE4AQ14139 1066 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 TXNRD3Q86VQ6 643 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 ZNF384Q8TF68 577 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 MCM9Q9NXL9 1143 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 KRT2P35908 639 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 FMR1Q06787 632 aaKnown RBP eCLIP18.71■□□□□ 0.59
SLX4-202ENST00000466154 DZIP1Q86YF9 867 aaKnown RBP18.71■□□□□ 0.59
SLX4-202ENST00000466154 CPLX3Q8WVH0 158 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
SLX4-202ENST00000466154 HSD3B7Q9H2F3 369 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 IMPACTQ9P2X3 320 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 DOT1LQ8TEK3 1739 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 TAF1P21675 1872 aa18.71■□□□□ 0.59
SLX4-202ENST00000466154 PTPREP23469 700 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 HIBADHP31937 336 aaKnown RBP18.7■□□□□ 0.58
SLX4-202ENST00000466154 CTCFLQ8NI51 663 aaPredicted RBP18.7■□□□□ 0.58
SLX4-202ENST00000466154 SHISA4Q96DD7 197 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 PPP1R13BQ96KQ4 1090 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 OSBPL5Q9H0X9 879 aaPredicted RBP18.7■□□□□ 0.58
SLX4-202ENST00000466154 NLRP5P59047 1200 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 SEC23AQ15436 765 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 C4AP0C0L4 1744 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 C4BP0C0L5 1744 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 COL4A1P02462 1669 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 RTL9Q8NET4 1388 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 IKBKBO14920 756 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 VEGFAP15692 232 aaPredicted RBP18.7■□□□□ 0.58
SLX4-202ENST00000466154 ADKP55263 362 aaKnown RBP18.7■□□□□ 0.58
SLX4-202ENST00000466154 PIK3AP1Q6ZUJ8 805 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 SAMSN1Q9NSI8 373 aaKnown RBP18.7■□□□□ 0.58
SLX4-202ENST00000466154 CEP131Q9UPN4 1083 aa18.7■□□□□ 0.58
SLX4-202ENST00000466154 IGSF3O75054 1194 aa18.69■□□□□ 0.58
SLX4-202ENST00000466154 MCM7P33993 719 aa18.69■□□□□ 0.58
SLX4-202ENST00000466154 DNAI1Q9UI46 699 aa18.69■□□□□ 0.58
SLX4-202ENST00000466154 CBFA2T2O43439 604 aa18.69■□□□□ 0.58
SLX4-202ENST00000466154 USP17L8P0C7I0 530 aa18.69■□□□□ 0.58
SLX4-202ENST00000466154 CDC25AP30304 524 aa18.69■□□□□ 0.58
SLX4-202ENST00000466154 BRMS1Q9HCU9 246 aa18.69■□□□□ 0.58
SLX4-202ENST00000466154 COL1A1P02452 1464 aaPredicted RBP18.68■□□□□ 0.58
SLX4-202ENST00000466154 USP5P45974 858 aa18.68■□□□□ 0.58
SLX4-202ENST00000466154 ELF2Q15723 593 aa18.68■□□□□ 0.58
SLX4-202ENST00000466154 NYAP1Q6ZVC0 841 aa18.68■□□□□ 0.58
SLX4-202ENST00000466154 SYMPKQ92797 1274 aaKnown RBP18.68■□□□□ 0.58
SLX4-202ENST00000466154 CRNKL1Q9BZJ0 848 aaKnown RBP18.68■□□□□ 0.58
SLX4-202ENST00000466154 BLZF1Q9H2G9 400 aa18.68■□□□□ 0.58
SLX4-202ENST00000466154 CTIFO43310 598 aaKnown RBP18.68■□□□□ 0.58
SLX4-202ENST00000466154 PKN1Q16512 942 aa18.68■□□□□ 0.58
SLX4-202ENST00000466154 RASSF8Q8NHQ8 419 aa18.68■□□□□ 0.58
SLX4-202ENST00000466154 NSUN4Q96CB9 384 aaKnown RBP18.68■□□□□ 0.58
SLX4-202ENST00000466154 DYNLL2Q96FJ2 89 aa18.68■□□□□ 0.58
SLX4-202ENST00000466154 RNF26Q9BY78 433 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms