RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 CCHCR1Q8TD31 782 aa10.67□□□□□ -0.7
CDHR3-203ENST00000466045 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
CDHR3-203ENST00000466045 HPCAL4Q9UM19 191 aa10.67□□□□□ -0.7
CDHR3-203ENST00000466045 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDHR3-203ENST00000466045 KRT85P78386 507 aa10.67□□□□□ -0.7
CDHR3-203ENST00000466045 DYNC1I2Q13409 638 aaKnown RBP10.67□□□□□ -0.7
CDHR3-203ENST00000466045 XRCC4Q13426 336 aa10.67□□□□□ -0.7
CDHR3-203ENST00000466045 PKN1Q16512 942 aa10.67□□□□□ -0.7
CDHR3-203ENST00000466045 C6orf89Q6UWU4 347 aa10.67□□□□□ -0.7
CDHR3-203ENST00000466045 SIRT2Q8IXJ6 389 aa10.67□□□□□ -0.7
CDHR3-203ENST00000466045 NGDNQ8NEJ9 315 aaKnown RBP10.67□□□□□ -0.7
CDHR3-203ENST00000466045 MBIPQ9NS73 344 aa10.67□□□□□ -0.7
CDHR3-203ENST00000466045 FMN2Q9NZ56 1722 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 TMEM221A6NGB7 291 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 WDHD1O75717 1129 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-203ENST00000466045 PENKP01210 267 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-203ENST00000466045 YY1P25490 414 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 TRPC1P48995 793 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 SCNN1BP51168 640 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 VSNL1P62760 191 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 E2F5Q15329 346 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 PABPC1LQ4VXU2 614 aaKnown RBP10.66□□□□□ -0.7
CDHR3-203ENST00000466045 IQCF2Q8IXL9 164 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 SMARCC2Q8TAQ2 1214 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 CNKSR1Q969H4 720 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 DHX58Q96C10 678 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 WDR24Q96S15 920 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 ZWILCHQ9H900 591 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 OVOS2A0A0J9YW53 1432 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 OVOS2Q6IE36 1432 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 RGPD1P0DJD0 1748 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 ABCC4O15439 1325 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 PLEKHG3A1L390 1219 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 NDUFAB1O14561 156 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 CREB3O43889 395 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 LUC7L3O95232 432 aaKnown RBP10.66□□□□□ -0.7
CDHR3-203ENST00000466045 POSTNQ15063 836 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 KBTBD12Q3ZCT8 623 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 Q4G0T1 1027 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 C11orf57Q6ZUT1 292 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-203ENST00000466045 BPIFA3Q9BQP9 254 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 CENPHQ9H3R5 247 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 ABCF2Q9UG63 623 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 BARX2Q9UMQ3 279 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-203ENST00000466045 MAPK8IP1Q9UQF2 711 aa10.66□□□□□ -0.7
CDHR3-203ENST00000466045 GPR75-ASB3A0A0A6YYF3 556 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 CNGA1P29973 690 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 SESN3P58005 492 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 RIPK1Q13546 671 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 SLC4A8Q2Y0W8 1093 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 ACCSLQ4AC99 568 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 GET4Q7L5D6 327 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-203ENST00000466045 LRRC59Q96AG4 307 aaKnown RBP10.65□□□□□ -0.7
CDHR3-203ENST00000466045 FAM81BQ96LP2 452 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 MTA3Q9BTC8 594 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 NUP58Q9BVL2 599 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 MYO1AQ9UBC5 1043 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 ATP8A1Q9Y2Q0 1164 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 ASB3Q9Y575 518 aa10.65□□□□□ -0.7
CDHR3-203ENST00000466045 SOS2Q07890 1332 aaPredicted RBP10.65□□□□□ -0.71
CDHR3-203ENST00000466045 BECN2A8MW95 431 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 ZNF202O95125 648 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 NPTXRO95502 500 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 HARSP12081 509 aaKnown RBP10.65□□□□□ -0.71
CDHR3-203ENST00000466045 ATP4AP20648 1035 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 GNGT1P63211 74 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 RRS1Q15050 365 aaKnown RBP10.65□□□□□ -0.71
CDHR3-203ENST00000466045 SKIDA1Q1XH10 827 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 TWISTNBQ3B726 338 aaPredicted RBP10.65□□□□□ -0.71
CDHR3-203ENST00000466045 RBM26Q5T8P6 1007 aaKnown RBP10.65□□□□□ -0.71
CDHR3-203ENST00000466045 NUGGCQ68CJ6 796 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 KRT28Q7Z3Y7 464 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 RPAP2Q8IXW5 612 aaPredicted RBP10.65□□□□□ -0.71
CDHR3-203ENST00000466045 TSPYL6Q8N831 410 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 GBP7Q8N8V2 638 aaPredicted RBP10.65□□□□□ -0.71
CDHR3-203ENST00000466045 JAKMIP2Q96AA8 810 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 SCLT1Q96NL6 688 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 SCAND2PQ9GZW5 306 aaPredicted RBP10.65□□□□□ -0.71
CDHR3-203ENST00000466045 DCTPP1Q9H773 170 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 ZFATQ9P243 1243 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 CDC23Q9UJX2 597 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 SAMM50Q9Y512 469 aa10.65□□□□□ -0.71
CDHR3-203ENST00000466045 ARHGAP6O43182 974 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 VIL1P09327 827 aaKnown RBP10.64□□□□□ -0.71
CDHR3-203ENST00000466045 MCM3P25205 808 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 GNG11P61952 73 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 KLHL10Q6JEL2 608 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 ARMC9Q7Z3E5 817 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 MYOCDQ8IZQ8 938 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 LZICQ8WZA0 190 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 ANKRD27Q96NW4 1050 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 HDAC6Q9UBN7 1215 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 USP6P35125 1406 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 ACEP12821 1306 aa10.64□□□□□ -0.71
CDHR3-203ENST00000466045 GNAQP50148 359 aa10.63□□□□□ -0.71
CDHR3-203ENST00000466045 CXorf38Q8TB03 319 aa10.63□□□□□ -0.71
CDHR3-203ENST00000466045 COG1Q8WTW3 980 aa10.63□□□□□ -0.71
CDHR3-203ENST00000466045 DHRS1Q96LJ7 313 aa10.63□□□□□ -0.71
CDHR3-203ENST00000466045 WDR35Q9P2L0 1181 aa10.63□□□□□ -0.71
CDHR3-203ENST00000466045 PPP2R2CQ9Y2T4 447 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms