RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 PSMD1Q99460 953 aa8.22□□□□□ -1.09
TPM3-214ENST00000466010 ESYT1Q9BSJ8 1104 aa8.22□□□□□ -1.09
TPM3-214ENST00000466010 NMRK2Q9NPI5 230 aa8.22□□□□□ -1.09
TPM3-214ENST00000466010 COL11A2P13942 1736 aaPredicted RBP8.22□□□□□ -1.09
TPM3-214ENST00000466010 UBN2Q6ZU65 1347 aa8.22□□□□□ -1.09
TPM3-214ENST00000466010 ARFGEF2Q9Y6D5 1785 aa8.22□□□□□ -1.09
TPM3-214ENST00000466010 FAM177BA6PVY3 158 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 APAF1O14727 1248 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 NTSR2O95665 410 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 ZNF853P0CG23 659 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 GPTP24298 496 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 ORC1Q13415 861 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 TCIRG1Q13488 830 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 CCDC144BQ3MJ40 725 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 SLC10A5Q5PT55 438 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 SUSD4Q5VX71 490 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 PLBD2Q8NHP8 589 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 XAGE3Q8WTP9 111 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 JDP2Q8WYK2 163 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 CFHR5Q9BXR6 569 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 VPS33BQ9H267 617 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 DDX41Q9UJV9 622 aaKnown RBP8.21□□□□□ -1.1
TPM3-214ENST00000466010 HCN4Q9Y3Q4 1203 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 SH3TC1Q8TE82 1336 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 SBF1O95248 1867 aa8.21□□□□□ -1.1
TPM3-214ENST00000466010 FER1L6Q2WGJ9 1857 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 PPEF1O14829 653 aaPredicted RBP8.2□□□□□ -1.1
TPM3-214ENST00000466010 STK10O94804 968 aaKnown RBP8.2□□□□□ -1.1
TPM3-214ENST00000466010 DDX58O95786 925 aaKnown RBP8.2□□□□□ -1.1
TPM3-214ENST00000466010 RPIAP49247 311 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 PTPN12Q05209 780 aaKnown RBP8.2□□□□□ -1.1
TPM3-214ENST00000466010 FAM26DQ5JW98 314 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 DUSP27Q5VZP5 1158 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 GPR152Q8TDT2 470 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 FAM163AQ96GL9 167 aaPredicted RBP8.2□□□□□ -1.1
TPM3-214ENST00000466010 PHACTR1Q9C0D0 580 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 RRAGCQ9HB90 399 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 MBIPQ9NS73 344 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 KLK14Q9P0G3 267 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 CHPF2Q9P2E5 772 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 TRMT112Q9UI30 125 aaKnown RBP8.2□□□□□ -1.1
TPM3-214ENST00000466010 TLL2Q9Y6L7 1015 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 ABCC12Q96J65 1359 aa8.2□□□□□ -1.1
TPM3-214ENST00000466010 NUP98P52948 1817 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 TLDC2A0PJX2 215 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 BBOX1O75936 387 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 CD2BP2O95400 341 aaKnown RBP8.19□□□□□ -1.1
TPM3-214ENST00000466010 CTSHP09668 335 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 RBL2Q08999 1139 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 AIMP1Q12904 312 aaKnown RBP8.19□□□□□ -1.1
TPM3-214ENST00000466010 TRIM28Q13263 835 aaKnown RBP8.19□□□□□ -1.1
TPM3-214ENST00000466010 CLN3Q13286 438 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 PROSER3Q2NL68 480 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 ZNF394Q53GI3 561 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 CCDC30Q5VVM6 783 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 NLRP10Q86W26 655 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 TREML1Q86YW5 311 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 SUPT20HQ8NEM7 779 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 C12orf49Q9H741 205 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 GGT7Q9UJ14 662 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 PCDHGB7Q9Y5F8 929 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 USP3Q9Y6I4 520 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 TIAM2Q8IVF5 1701 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 IL16Q14005 1332 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 SLX4Q8IY92 1834 aa8.19□□□□□ -1.1
TPM3-214ENST00000466010 WDR90Q96KV7 1748 aa8.18□□□□□ -1.1
TPM3-214ENST00000466010 ADH1AP07327 375 aa8.18□□□□□ -1.1
TPM3-214ENST00000466010 ADD1P35611 737 aaKnown RBP8.18□□□□□ -1.1
TPM3-214ENST00000466010 IARSP41252 1262 aaKnown RBP8.18□□□□□ -1.1
TPM3-214ENST00000466010 PRELPP51888 382 aa8.18□□□□□ -1.1
TPM3-214ENST00000466010 C1orf53Q5VUE5 145 aa8.18□□□□□ -1.1
TPM3-214ENST00000466010 DDX46Q7L014 1031 aaKnown RBP8.18□□□□□ -1.1
TPM3-214ENST00000466010 PNMA8AQ86V59 439 aaPredicted RBP8.18□□□□□ -1.1
TPM3-214ENST00000466010 GPC2Q8N158 579 aa8.18□□□□□ -1.1
TPM3-214ENST00000466010 STK31Q9BXU1 1019 aa8.18□□□□□ -1.1
TPM3-214ENST00000466010 NIFKQ9BYG3 293 aaKnown RBP8.18□□□□□ -1.1
TPM3-214ENST00000466010 ZSWIM4Q9H7M6 989 aa8.18□□□□□ -1.1
TPM3-214ENST00000466010 ATP6V0A2Q9Y487 856 aa8.18□□□□□ -1.1
TPM3-214ENST00000466010 DICER1Q9UPY3 1922 aaKnown RBP8.17□□□□□ -1.1
TPM3-214ENST00000466010 RNF223E7ERA6 249 aa8.17□□□□□ -1.1
TPM3-214ENST00000466010 FZD9O00144 591 aa8.17□□□□□ -1.1
TPM3-214ENST00000466010 ANXA1P04083 346 aa8.17□□□□□ -1.1
TPM3-214ENST00000466010 SH3PXD2AQ5TCZ1 1133 aa8.17□□□□□ -1.1
TPM3-214ENST00000466010 SYNE4Q8N205 404 aa8.17□□□□□ -1.1
TPM3-214ENST00000466010 ZDHHC1Q8WTX9 485 aa8.17□□□□□ -1.1
TPM3-214ENST00000466010 ZNF277Q9NRM2 450 aaPredicted RBP8.17□□□□□ -1.1
TPM3-214ENST00000466010 OPLAHO14841 1288 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 EIF6P56537 245 aaKnown RBP8.16□□□□□ -1.1
TPM3-214ENST00000466010 RACK1P63244 317 aaKnown RBP8.16□□□□□ -1.1
TPM3-214ENST00000466010 KRT24Q2M2I5 525 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
TPM3-214ENST00000466010 ANKRD36CQ5JPF3 1778 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 LDHDQ86WU2 507 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 WDR63Q8IWG1 891 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 SP8Q8IXZ3 490 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 ZBTB38Q8NAP3 1195 aaPredicted RBP8.16□□□□□ -1.1
TPM3-214ENST00000466010 CCDC191Q8NCU4 936 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 SNED1Q8TER0 1413 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
TPM3-214ENST00000466010 ISCA1Q9BUE6 129 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms