RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 PITPNM2Q9BZ72 1349 aa9.89□□□□□ -0.83
SSB-207ENST00000465871 CST3P01034 146 aaPredicted RBP9.89□□□□□ -0.83
SSB-207ENST00000465871 ZNF865P0CJ78 1059 aaPredicted RBP9.89□□□□□ -0.83
SSB-207ENST00000465871 RPL6Q02878 288 aaKnown RBP9.89□□□□□ -0.83
SSB-207ENST00000465871 SFRP5Q5T4F7 317 aa9.89□□□□□ -0.83
SSB-207ENST00000465871 ZNF746Q6NUN9 644 aaPredicted RBP9.89□□□□□ -0.83
SSB-207ENST00000465871 LETMD1Q6P1Q0 360 aa9.89□□□□□ -0.83
SSB-207ENST00000465871 ATG4DQ86TL0 474 aaPredicted RBP9.89□□□□□ -0.83
SSB-207ENST00000465871 TLR6Q9Y2C9 796 aa9.89□□□□□ -0.83
SSB-207ENST00000465871 SORBS3O60504 671 aa9.88□□□□□ -0.83
SSB-207ENST00000465871 IKZF1Q13422 519 aa9.88□□□□□ -0.83
SSB-207ENST00000465871 SLC23A3Q6PIS1 610 aa9.88□□□□□ -0.83
SSB-207ENST00000465871 KRTAP1-3Q8IUG1 177 aa9.88□□□□□ -0.83
SSB-207ENST00000465871 MFSD4AQ8N468 514 aa9.88□□□□□ -0.83
SSB-207ENST00000465871 LRRN4CLQ8ND94 238 aa9.88□□□□□ -0.83
SSB-207ENST00000465871 PHC3Q8NDX5 983 aa9.88□□□□□ -0.83
SSB-207ENST00000465871 PRR33A8MZF0 331 aa9.87□□□□□ -0.83
SSB-207ENST00000465871 PGRP06401 933 aa9.87□□□□□ -0.83
SSB-207ENST00000465871 PDE4BQ07343 736 aa9.87□□□□□ -0.83
SSB-207ENST00000465871 MRPL41Q8IXM3 137 aaKnown RBP9.87□□□□□ -0.83
SSB-207ENST00000465871 MRS2Q9HD23 443 aa9.87□□□□□ -0.83
SSB-207ENST00000465871 TJP2Q9UDY2 1190 aa9.87□□□□□ -0.83
SSB-207ENST00000465871 FAM155AB1AL88 458 aaPredicted RBP9.86□□□□□ -0.83
SSB-207ENST00000465871 DIEXFQ68CQ4 756 aaKnown RBP9.86□□□□□ -0.83
SSB-207ENST00000465871 CCDC84Q86UT8 332 aaPredicted RBP9.86□□□□□ -0.83
SSB-207ENST00000465871 RIN3Q8TB24 985 aa9.86□□□□□ -0.83
SSB-207ENST00000465871 XAGE3Q8WTP9 111 aa9.86□□□□□ -0.83
SSB-207ENST00000465871 GZF1Q9H116 711 aaPredicted RBP9.86□□□□□ -0.83
SSB-207ENST00000465871 VTI1BQ9UEU0 232 aa9.86□□□□□ -0.83
SSB-207ENST00000465871 CNTNAP4Q9C0A0 1308 aa9.85□□□□□ -0.83
SSB-207ENST00000465871 TAGLNQ01995 201 aaKnown RBP9.85□□□□□ -0.83
SSB-207ENST00000465871 ZP2Q05996 745 aa9.85□□□□□ -0.83
SSB-207ENST00000465871 OGFOD2Q6N063 350 aa9.85□□□□□ -0.83
SSB-207ENST00000465871 JARID2Q92833 1246 aaPredicted RBP9.85□□□□□ -0.83
SSB-207ENST00000465871 TMEM87BQ96K49 555 aa9.85□□□□□ -0.83
SSB-207ENST00000465871 COX4I2Q96KJ9 171 aa9.85□□□□□ -0.83
SSB-207ENST00000465871 ADAM30Q9UKF2 790 aa9.85□□□□□ -0.83
SSB-207ENST00000465871 CAPN6Q9Y6Q1 641 aa9.85□□□□□ -0.83
SSB-207ENST00000465871 ITGAEP38570 1179 aa9.84□□□□□ -0.83
SSB-207ENST00000465871 SLC6A19Q695T7 634 aa9.84□□□□□ -0.83
SSB-207ENST00000465871 DPH2Q9BQC3 489 aaPredicted RBP9.84□□□□□ -0.83
SSB-207ENST00000465871 SEMA3GQ9NS98 782 aa9.84□□□□□ -0.83
SSB-207ENST00000465871 LMNB2Q03252 620 aa9.83□□□□□ -0.84
SSB-207ENST00000465871 FLAD1Q8NFF5 587 aa9.83□□□□□ -0.84
SSB-207ENST00000465871 RHOVQ96L33 236 aa9.83□□□□□ -0.84
SSB-207ENST00000465871 HSPA12BQ96MM6 686 aa9.83□□□□□ -0.84
SSB-207ENST00000465871 PRDM7Q9NQW5 492 aa9.83□□□□□ -0.84
SSB-207ENST00000465871 BPNT1O95861 308 aa9.82□□□□□ -0.84
SSB-207ENST00000465871 YBX3P16989 372 aaKnown RBP eCLIP9.82□□□□□ -0.84
SSB-207ENST00000465871 CYP7A1P22680 504 aa9.82□□□□□ -0.84
SSB-207ENST00000465871 CAMK2GQ13555 558 aaPredicted RBP9.82□□□□□ -0.84
SSB-207ENST00000465871 BNC2Q6ZN30 1099 aaPredicted RBP9.82□□□□□ -0.84
SSB-207ENST00000465871 MCATQ8IVS2 390 aaKnown RBP9.82□□□□□ -0.84
SSB-207ENST00000465871 ACSF2Q96CM8 615 aaPredicted RBP9.82□□□□□ -0.84
SSB-207ENST00000465871 ST14Q9Y5Y6 855 aa9.82□□□□□ -0.84
SSB-207ENST00000465871 F6X3S4 739 aa9.81□□□□□ -0.84
SSB-207ENST00000465871 CILPO75339 1184 aa9.81□□□□□ -0.84
SSB-207ENST00000465871 KIR3DL1P43629 444 aa9.81□□□□□ -0.84
SSB-207ENST00000465871 CDKAL1Q5VV42 579 aa9.81□□□□□ -0.84
SSB-207ENST00000465871 POU5F2Q8N7G0 328 aa9.81□□□□□ -0.84
SSB-207ENST00000465871 LMCD1Q9NZU5 365 aa9.81□□□□□ -0.84
SSB-207ENST00000465871 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.81□□□□□ -0.84
SSB-207ENST00000465871 CARMIL2Q6F5E8 1435 aa9.81□□□□□ -0.84
SSB-207ENST00000465871 FAM221AA4D161 298 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 H3BS24 57 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 CBX7O95931 251 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 PF4P02776 101 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 ETV3P41162 512 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 THAP5Q7Z6K1 395 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 CDH24Q86UP0 819 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 GATAD2BQ8WXI9 593 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 FAM168AQ92567 244 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 TMEM74Q96NL1 305 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 ATP13A1Q9HD20 1204 aa9.8□□□□□ -0.84
SSB-207ENST00000465871 F13A1P00488 732 aa9.79□□□□□ -0.84
SSB-207ENST00000465871 PWP1Q13610 501 aa9.79□□□□□ -0.84
SSB-207ENST00000465871 RSRP1Q9BUV0 290 aa9.79□□□□□ -0.84
SSB-207ENST00000465871 CORINQ9Y5Q5 1042 aa9.79□□□□□ -0.84
SSB-207ENST00000465871 PLCG1P19174 1290 aa9.78□□□□□ -0.84
SSB-207ENST00000465871 GBP2P32456 591 aaPredicted RBP9.78□□□□□ -0.84
SSB-207ENST00000465871 RELL1Q8IUW5 271 aa9.78□□□□□ -0.84
SSB-207ENST00000465871 DNAJB8Q8NHS0 232 aa9.78□□□□□ -0.84
SSB-207ENST00000465871 CARS2Q9HA77 564 aaKnown RBP9.78□□□□□ -0.84
SSB-207ENST00000465871 TNK2Q07912 1038 aa9.77□□□□□ -0.85
SSB-207ENST00000465871 TMEM201Q5SNT2 666 aa9.77□□□□□ -0.85
SSB-207ENST00000465871 PIWIL2Q8TC59 973 aaKnown RBP9.77□□□□□ -0.85
SSB-207ENST00000465871 CTNND2Q9UQB3 1225 aa9.77□□□□□ -0.85
SSB-207ENST00000465871 FAM13CQ8NE31 585 aa9.76□□□□□ -0.85
SSB-207ENST00000465871 CYB5D2Q8WUJ1 264 aa9.76□□□□□ -0.85
SSB-207ENST00000465871 YARSP54577 528 aaKnown RBP9.75□□□□□ -0.85
SSB-207ENST00000465871 SNAP47Q5SQN1 464 aa9.75□□□□□ -0.85
SSB-207ENST00000465871 TMEM40Q8WWA1 233 aa9.75□□□□□ -0.85
SSB-207ENST00000465871 CEP131Q9UPN4 1083 aa9.75□□□□□ -0.85
SSB-207ENST00000465871 PRR36Q9H6K5 1346 aa9.75□□□□□ -0.85
SSB-207ENST00000465871 FAM160A1Q05DH4 1040 aa9.74□□□□□ -0.85
SSB-207ENST00000465871 ZSWIM9Q86XI8 627 aa9.74□□□□□ -0.85
SSB-207ENST00000465871 PPP1R13LQ8WUF5 828 aa9.74□□□□□ -0.85
SSB-207ENST00000465871 UBE2FQ969M7 185 aa9.74□□□□□ -0.85
SSB-207ENST00000465871 BCL2L13Q9BXK5 485 aa9.74□□□□□ -0.85
SSB-207ENST00000465871 RBAK-RBAKDNI3L0D1 243 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms